mRNA_H-paniculata_contig39470.10254.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: A0A8J6LFP5_TENMO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LFP5_TENMO) HSP 1 Score: 121 bits (303), Expect = 9.310e-29 Identity = 65/172 (37.79%), Postives = 103/172 (59.88%), Query Frame = 1
Query: 7 EPKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGAVGRLDKAMYGLVQASRCWSMKVTTDLTAKGF 522
EP++ +A +S EHW++A + E+Q L +N W VE PKN+ + +YK K +EDG V+KYK LVA G +Q+ G+ + E SP S M+L +A + LR D + A+L IDE ++++ P Y++ V +L++++YGL QASRCW+ + T+ L+ G
Sbjct: 132 EPESFEEATSSGNSEHWKQAMDEEIQSLKQNQTWTLVEPPKNQQFIDNRWVYKIKRNEDGSVQKYKARLVARGFRQVAGVDYNETFSPVTKFDSIRMILCVAVSEKLILRQFDVKTAFLYGNIDEILYMQQPDGYQDGTKRVCKLNRSLYGLKQASRCWNQRFTSVLSRLGL 303
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: A0A8J6LHG9_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LHG9_TENMO) HSP 1 Score: 118 bits (296), Expect = 1.180e-27 Identity = 65/172 (37.79%), Postives = 103/172 (59.88%), Query Frame = 1
Query: 7 EPKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGAVGRLDKAMYGLVQASRCWSMKVTTDLTAKGF 522
EP++ +A +S E W++A + E+Q L +N W VE PKN+ V+ +Y K +EDG V+KYK LVA G +Q+ G+ + E SP S M+L +AA + LR D + A+L IDE ++++ P Y++ V +L++++YGL QASRCW+ + T+ L+ G
Sbjct: 197 EPESFEEATSSGNAEQWKQAMDEEIQSLKQNQTWTLVEPPKNQQVIDNRWVYIIKRNEDGSVQKYKARLVARGFRQVAGVDYNETFSPVTKFDSIRMILCVAASEKLILRQFDVKTAFLYGNIDEILYMQQPDGYQDGTKRVCKLNRSLYGLKQASRCWNQRFTSVLSRLGL 368
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: UPI0020246435 (hypothetical protein n=2 Tax=Proteus mirabilis TaxID=584 RepID=UPI0020246435) HSP 1 Score: 109 bits (272), Expect = 1.220e-24 Identity = 62/174 (35.63%), Postives = 99/174 (56.90%), Query Frame = 1
Query: 7 EPKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGA--VGRLDKAMYGLVQASRCWSMKVTTDLTAKGF 522
EP N+ +A SP+ W A + EM + EN VW V+ P ++ + I+K+K DG V YK LVA G +Q++GI + E SP S ++L +AA D E+ +D + A+L ++EE+++ P + + GA V +L +++YGLVQASR W+ + + + A GF
Sbjct: 7 EPTNYEEAMVSPDSAKWLEAMKSEMGSMYENKVWTLVDLPDDRQAIENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGIDYDETFSPVAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLEEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWNKRFDSVIKAYGF 180
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT) HSP 1 Score: 109 bits (272), Expect = 1.910e-24 Identity = 60/158 (37.97%), Postives = 94/158 (59.49%), Query Frame = 1
Query: 55 WQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEY--RESPGAVGRLDKAMYGLVQASRCWSMKVTTDLTAKGF 522
W+ A + E + L++N W V PK K +V + ++K K + DG VE++K LVA G Q +GI +QE SP S +L +A I D E+ +D + A+LQ +DE IF++ P Y +E P V +L++++YGL QA+RCW+ + T L + G+
Sbjct: 829 WKEATDSEYESLMKNDTWELVPPPKGKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFLQGELDEVIFMKQPEGYVDQERPDHVCKLNRSIYGLKQAARCWNSAIDTFLISNGY 986
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: A0A8I7BEN6_HORVV (Uncharacterized protein n=26 Tax=cellular organisms TaxID=131567 RepID=A0A8I7BEN6_HORVV) HSP 1 Score: 106 bits (265), Expect = 1.660e-23 Identity = 60/174 (34.48%), Postives = 98/174 (56.32%), Query Frame = 1
Query: 7 EPKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGA--VGRLDKAMYGLVQASRCWSMKVTTDLTAKGF 522
EP N+ +A A P+ W A + E+ + EN VW V+ P + + I+K+K +G V YK LVA G +QI+G+ ++E SP S ++L +AA D E+ +D + A+L + EE+++ P + + GA V +L +++YGLVQASR W+++ + A GF
Sbjct: 804 EPSNYEEAMAGPDSNKWLEAMKSEIGSMYENKVWTLVDLPDERQAIENKWIFKKKTDANGNVTVYKARLVAKGFRQIQGVDYEETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGNLKEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWNIRFNEVIKAFGF 977
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: A0A1V9YH81_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YH81_9STRA) HSP 1 Score: 106 bits (264), Expect = 2.300e-23 Identity = 61/174 (35.06%), Postives = 93/174 (53.45%), Query Frame = 1
Query: 7 EPKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGAVGRL-DKAMYGLVQASRCWSMKVTTDLTAKGFE 525
EP+N R+A A P+ + W+ A + E+ LI+NG W V +P +V +YK K G+VE++K LVA G Q G+ F E SP S ++L+LAAI D + H+D QAY++A +D +++ P P L K++YGL Q+ R W + L G++
Sbjct: 1116 EPRNPREALAGPQAKEWETAMQAEIDNLIQNGTWELVAKPVGVNIVGHKWVYKIKFDNVGEVERFKARLVAQGFSQRYGVDFTETFSPVIRQPSVRVLLVLAAILDVPVLHLDVPQAYVKAKLDTTVYMSVPALVPGDPNTQALLLKKSLYGLKQSGRMWHEDINATLLTLGYQ 1289
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: UPI0020240260 (hypothetical protein n=1 Tax=Proteus mirabilis TaxID=584 RepID=UPI0020240260) HSP 1 Score: 103 bits (257), Expect = 3.020e-23 Identity = 58/174 (33.33%), Postives = 97/174 (55.75%), Query Frame = 1
Query: 7 EPKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGA--VGRLDKAMYGLVQASRCWSMKVTTDLTAKGF 522
EP N+ +A A P+ + W A + E+ + EN VW + P ++ + I+K+K DG V YK LVA G +Q++G+ + E SP S ++L +AA D E+ +D + A+L + EE+++ P + + A V +L +++YGLVQASR W+++ + A GF
Sbjct: 15 EPSNYEEAMAGPDSDKWLEAMKSEIGSMYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKNADKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGF 188
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: A0A5N6LW24_9ASTR (Integrase catalytic domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LW24_9ASTR) HSP 1 Score: 105 bits (262), Expect = 4.050e-23 Identity = 62/174 (35.63%), Postives = 93/174 (53.45%), Query Frame = 1
Query: 7 EPKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRES--PGAVGRLDKAMYGLVQASRCWSMKVTTDLTAKGF 522
EP NH+ A + PE W A EMQ + +N VW VE P V + I+KRK G V YK LVA G Q +G+ + E SP S ++L +AA D E+ +D + A+L + E++++ P + + P V +L+K++YGL QASRCW+++ + GF
Sbjct: 465 EPTNHKTAISDPESAKWLDAMNSEMQSMRDNQVWDLVELPPGSRAVGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPEGFVDPKYPNKVCKLNKSIYGLKQASRCWNLRFDQKIKEFGF 638
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: G7E3S6_MIXOS (Integrase catalytic domain-containing protein n=1 Tax=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) TaxID=764103 RepID=G7E3S6_MIXOS) HSP 1 Score: 105 bits (262), Expect = 4.160e-23 Identity = 61/175 (34.86%), Postives = 100/175 (57.14%), Query Frame = 1
Query: 10 PKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGA---VGRLDKAMYGLVQASRCWSMKVTTDLTAKGFE 525
P+N ++A ASP+ ++W+ A + E + + N VW VE P + + T+ ++ K+ E G+V +YK LVA G +QI G+ + E S+ + + VL LAA +D EL D A+L +P++E+I+++ +Y PG V +L KA+YGL QA W ++ L A G +
Sbjct: 764 PRNVKEALASPQADYWKDAMDAEYESMAANKVWELVELPPGRKAIDTLFVFATKVDEKGEVYRYKARLVAKGYRQIPGVDYFETSASVASLPAVRTVLALAASRDYELIQADITSAFLNSPLEEDIYIKQQADYTV-PGQETLVCKLKKAIYGLKQAGLAWVNTLSERLIAFGLD 937
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: UPI002025A47D (hypothetical protein n=1 Tax=Proteus mirabilis TaxID=584 RepID=UPI002025A47D) HSP 1 Score: 104 bits (260), Expect = 5.580e-23 Identity = 58/174 (33.33%), Postives = 97/174 (55.75%), Query Frame = 1
Query: 7 EPKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGA--VGRLDKAMYGLVQASRCWSMKVTTDLTAKGF 522
EP N+ +A A P+ W A + E++ + EN VW + P ++ + I+K+K DG V YK LVA G +Q++G+ + E SP S ++L +AA D E+ +D + A+L + EE+++ P + + A V +L +++YGLVQASR W+++ + A GF
Sbjct: 15 EPSNYEEAMAGPDSNKWLEAMKSEIESMYENKVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAYYDYEIWQMDVKTAFLNGHLKEELYMMQPEGFVDPKNANKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGF 188 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig39470.10254.1 >prot_H-paniculata_contig39470.10254.1 ID=prot_H-paniculata_contig39470.10254.1|Name=mRNA_H-paniculata_contig39470.10254.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=175bp MEPKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMback to top mRNA from alignment at H-paniculata_contig39470:1377..1904+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig39470.10254.1 ID=mRNA_H-paniculata_contig39470.10254.1|Name=mRNA_H-paniculata_contig39470.10254.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=528bp|location=Sequence derived from alignment at H-paniculata_contig39470:1377..1904+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig39470:1377..1904+ >mRNA_H-paniculata_contig39470.10254.1 ID=mRNA_H-paniculata_contig39470.10254.1|Name=mRNA_H-paniculata_contig39470.10254.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1050bp|location=Sequence derived from alignment at H-paniculata_contig39470:1377..1904+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |