prot_H-paniculata_contig39470.10254.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig39470.10254.1
Unique Nameprot_H-paniculata_contig39470.10254.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length175
Homology
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: A0A8J6LFP5_TENMO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LFP5_TENMO)

HSP 1 Score: 121 bits (304), Expect = 6.560e-29
Identity = 65/172 (37.79%), Postives = 103/172 (59.88%), Query Frame = 0
Query:    2 EPKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGAVGRLDKAMYGLVQASRCWSMKVTTDLTAKGF 173
            EP++  +A +S   EHW++A + E+Q L +N  W  VE PKN+  +    +YK K +EDG V+KYK  LVA G +Q+ G+ + E  SP     S  M+L +A  +   LR  D + A+L   IDE ++++ P  Y++    V +L++++YGL QASRCW+ + T+ L+  G 
Sbjct:  132 EPESFEEATSSGNSEHWKQAMDEEIQSLKQNQTWTLVEPPKNQQFIDNRWVYKIKRNEDGSVQKYKARLVARGFRQVAGVDYNETFSPVTKFDSIRMILCVAVSEKLILRQFDVKTAFLYGNIDEILYMQQPDGYQDGTKRVCKLNRSLYGLKQASRCWNQRFTSVLSRLGL 303          
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: A0A8J6LHG9_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LHG9_TENMO)

HSP 1 Score: 119 bits (297), Expect = 8.380e-28
Identity = 65/172 (37.79%), Postives = 103/172 (59.88%), Query Frame = 0
Query:    2 EPKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGAVGRLDKAMYGLVQASRCWSMKVTTDLTAKGF 173
            EP++  +A +S   E W++A + E+Q L +N  W  VE PKN+ V+    +Y  K +EDG V+KYK  LVA G +Q+ G+ + E  SP     S  M+L +AA +   LR  D + A+L   IDE ++++ P  Y++    V +L++++YGL QASRCW+ + T+ L+  G 
Sbjct:  197 EPESFEEATSSGNAEQWKQAMDEEIQSLKQNQTWTLVEPPKNQQVIDNRWVYIIKRNEDGSVQKYKARLVARGFRQVAGVDYNETFSPVTKFDSIRMILCVAASEKLILRQFDVKTAFLYGNIDEILYMQQPDGYQDGTKRVCKLNRSLYGLKQASRCWNQRFTSVLSRLGL 368          
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: A0A443RUL6_9ACAR (Integrase core domain protein-like protein (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443RUL6_9ACAR)

HSP 1 Score: 112 bits (279), Expect = 1.110e-26
Identity = 64/158 (40.51%), Postives = 87/158 (55.06%), Query Frame = 0
Query:   16 EHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGAVGRLDKAMYGLVQASRCWSMKVTTDLTAKGF 173
            E W  A   EM  L +N  W  VERP    +V    +Y+ K + DG V ++K  LVA G  Q KGI FQE  +P     S   +L +AA +D EL   D + A+L   ++EEIF+E P+ Y ++ G V RL K++YGL QA RCW+ K  + L   G 
Sbjct:    4 EEWIAAMNDEMASLKKNETWHLVERPIGANIVKNRWVYRIKENSDGSVARFKARLVAKGFTQKKGIDFQETFAPVVKMTSVRTILAIAAHEDMELVQFDVKTAFLHGELEEEIFMEQPIGYNDNSGRVCRLQKSLYGLKQAPRCWNEKFHSFLKQFGL 161          
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: UPI0020246435 (hypothetical protein n=2 Tax=Proteus mirabilis TaxID=584 RepID=UPI0020246435)

HSP 1 Score: 109 bits (273), Expect = 8.560e-25
Identity = 62/174 (35.63%), Postives = 99/174 (56.90%), Query Frame = 0
Query:    2 EPKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGA--VGRLDKAMYGLVQASRCWSMKVTTDLTAKGF 173
            EP N+ +A  SP+   W  A + EM  + EN VW  V+ P ++  +    I+K+K   DG V  YK  LVA G +Q++GI + E  SP     S  ++L +AA  D E+  +D + A+L   ++EE+++  P  + +  GA  V +L +++YGLVQASR W+ +  + + A GF
Sbjct:    7 EPTNYEEAMVSPDSAKWLEAMKSEMGSMYENKVWTLVDLPDDRQAIENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGIDYDETFSPVAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLEEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWNKRFDSVIKAYGF 180          
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT)

HSP 1 Score: 109 bits (272), Expect = 1.840e-24
Identity = 60/158 (37.97%), Postives = 94/158 (59.49%), Query Frame = 0
Query:   18 WQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEY--RESPGAVGRLDKAMYGLVQASRCWSMKVTTDLTAKGF 173
            W+ A + E + L++N  W  V  PK K +V +  ++K K + DG VE++K  LVA G  Q +GI +QE  SP     S   +L +A I D E+  +D + A+LQ  +DE IF++ P  Y  +E P  V +L++++YGL QA+RCW+  + T L + G+
Sbjct:  829 WKEATDSEYESLMKNDTWELVPPPKGKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFLQGELDEVIFMKQPEGYVDQERPDHVCKLNRSIYGLKQAARCWNSAIDTFLISNGY 986          
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: A0A146LHR9_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A146LHR9_LYGHE)

HSP 1 Score: 108 bits (270), Expect = 3.140e-24
Identity = 58/173 (33.53%), Postives = 98/173 (56.65%), Query Frame = 0
Query:    2 EPKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGAVGRLDKAMYGLVQASRCWSMKVTTDLTAKGFE 174
            EPKN+R+A  S    +W++A + E+  L EN  W     P  K  +ST  +YK K++ DG ++K+K  LV  G  Q  GI +++  SP   A++   +L +AA ++ +L   D   A+L   ++EEI+++ P  + +    V +L++++YGL QA RCW+ +    L   GF+
Sbjct:  241 EPKNYREAINSENKVNWEKAMQSEIDSLHENKTWTLANLPDGKKAISTKWVYKVKMNPDGTIDKFKARLVVQGFSQRLGIDYEQTFSPVAKASTVRTLLSVAASKNMKLMQFDVSTAFLYGYLEEEIYIKQPEGFDDGSNKVCKLNRSLYGLKQAPRCWNQRFAAFLLKIGFK 413          
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: A0A8I7BEN6_HORVV (Uncharacterized protein n=26 Tax=cellular organisms TaxID=131567 RepID=A0A8I7BEN6_HORVV)

HSP 1 Score: 107 bits (266), Expect = 1.180e-23
Identity = 60/174 (34.48%), Postives = 98/174 (56.32%), Query Frame = 0
Query:    2 EPKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGA--VGRLDKAMYGLVQASRCWSMKVTTDLTAKGF 173
            EP N+ +A A P+   W  A + E+  + EN VW  V+ P  +  +    I+K+K   +G V  YK  LVA G +QI+G+ ++E  SP     S  ++L +AA  D E+  +D + A+L   + EE+++  P  + +  GA  V +L +++YGLVQASR W+++    + A GF
Sbjct:  804 EPSNYEEAMAGPDSNKWLEAMKSEIGSMYENKVWTLVDLPDERQAIENKWIFKKKTDANGNVTVYKARLVAKGFRQIQGVDYEETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGNLKEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWNIRFNEVIKAFGF 977          
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: A0A085NBE7_9BILA (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085NBE7_9BILA)

HSP 1 Score: 106 bits (265), Expect = 1.540e-23
Identity = 57/161 (35.40%), Postives = 93/161 (57.76%), Query Frame = 0
Query:    3 PKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGAVGRLDKAMYGLVQASRCWSMK 163
            PK++ +A  + E  HW++A E EMQ L EN  W+  + P +K V+S   + + K   DG V++YK  LVA G  Q  GI + E  SP     +   +L ++A +D  LR  D + A+L   ++EE++++ P  + +  G V +L +++YGL QA RCW+ +
Sbjct:  598 PKSYAEAMRAKESMHWKKAMEDEMQSLAENQTWVLTDLPADKKVLSCRWVLRVKTKADGTVDRYKARLVAKGFAQKYGIDYDETFSPVARFDTVRTILAVSADEDLVLRQFDVKTAFLYGSLEEEVYMKQPEGFDDGSGRVCKLQRSLYGLKQAPRCWNTR 758          
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: A0A085MSN1_9BILA (Uncharacterized protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085MSN1_9BILA)

HSP 1 Score: 106 bits (265), Expect = 1.580e-23
Identity = 57/161 (35.40%), Postives = 93/161 (57.76%), Query Frame = 0
Query:    3 PKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGAVGRLDKAMYGLVQASRCWSMK 163
            PK++ +A  + E  HW++A E EMQ L EN  W+  + P +K V+S   + + K   DG V++YK  LVA G  Q  GI + E  SP     +   +L ++A +D  LR  D + A+L   ++EE++++ P  + +  G V +L +++YGL QA RCW+ +
Sbjct:  767 PKSYAEAMRAKESMHWKKAMEDEMQSLAENQTWVLTDLPADKKVLSCRWVLRVKTKADGTVDRYKARLVAKGFAQKYGIDYDETFSPVARFDTVRTILAVSADEDLVLRQFDVKTAFLYGSLEEEVYMKQPEGFDDGSGRVCKLQRSLYGLKQAPRCWNTR 927          
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Match: A0A1V9YH81_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YH81_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.630e-23
Identity = 61/174 (35.06%), Postives = 93/174 (53.45%), Query Frame = 0
Query:    2 EPKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTMMIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVLLLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGAVGRL-DKAMYGLVQASRCWSMKVTTDLTAKGFE 174
            EP+N R+A A P+ + W+ A + E+  LI+NG W  V +P    +V    +YK K    G+VE++K  LVA G  Q  G+ F E  SP     S  ++L+LAAI D  + H+D  QAY++A +D  +++  P      P     L  K++YGL Q+ R W   +   L   G++
Sbjct: 1116 EPRNPREALAGPQAKEWETAMQAEIDNLIQNGTWELVAKPVGVNIVGHKWVYKIKFDNVGEVERFKARLVAQGFSQRYGVDFTETFSPVIRQPSVRVLLVLAAILDVPVLHLDVPQAYVKAKLDTTVYMSVPALVPGDPNTQALLLKKSLYGLKQSGRMWHEDINATLLTLGYQ 1289          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39470.10254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J6LFP5_TENMO6.560e-2937.79Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8J6LHG9_TENMO8.380e-2837.79Uncharacterized protein n=1 Tax=Tenebrio molitor T... [more]
A0A443RUL6_9ACAR1.110e-2640.51Integrase core domain protein-like protein (Fragme... [more]
UPI00202464358.560e-2535.63hypothetical protein n=2 Tax=Proteus mirabilis Tax... [more]
A0A6S7HNY1_PARCT1.840e-2437.97Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A146LHR9_LYGHE3.140e-2433.53Retrovirus-related Pol polyprotein from transposon... [more]
A0A8I7BEN6_HORVV1.180e-2334.48Uncharacterized protein n=26 Tax=cellular organism... [more]
A0A085NBE7_9BILA1.540e-2335.40Integrase catalytic domain-containing protein (Fra... [more]
A0A085MSN1_9BILA1.580e-2335.40Uncharacterized protein n=1 Tax=Trichuris suis Tax... [more]
A0A1V9YH81_9STRA1.630e-2335.06Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 34..174
e-value: 6.7E-29
score: 101.2
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 8..173
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 8..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39470contigH-paniculata_contig39470:1380..1904 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39470.10254.1mRNA_H-paniculata_contig39470.10254.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig39470 1377..1904 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig39470.10254.1 ID=prot_H-paniculata_contig39470.10254.1|Name=mRNA_H-paniculata_contig39470.10254.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=175bp
MEPKNHRKAQASPEWEHWQRAEEVEMQGLIENGVWMQVERPKNKLVVSTM
MIYKRKISEDGKVEKYKCPLVAHGNQQIKGIHFQEASSPAPAAASTNMVL
LLAAIQDRELRHVDFEQAYLQAPIDEEIFVEFPVEYRESPGAVGRLDKAM
YGLVQASRCWSMKVTTDLTAKGFE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like