mRNA_H-paniculata_contig3938.10233.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: D8LN43_ECTSI (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN43_ECTSI) HSP 1 Score: 611 bits (1576), Expect = 8.450e-206 Identity = 348/511 (68.10%), Postives = 387/511 (75.73%), Query Frame = 1
Query: 1 RWEDSGWRVQDADIIGRRDLRGAGLNTMSVDPPGCQDIDDAMHVRRKGNGKLEVGVHIADVTQFLVADGSLDKEARARATTVYLVHRRIDMLPTLLSSDLCSLHAGRDRLSVSVLWEAEENG-EDIVISKRADGSPVCWFGRTVIHSVASMTYDQAQMLVEEGKIRKPPNHKEPPPGQAGRDVGEGLQPALSHDLHLLTRFAR*TIRKQREKKGAIDLSNTGAELKFKIDPTTGTPLAVAGKEESEIHHTIAELMILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAARVGASS-SEGFAATLASVGGVGES-----GAGHKGPKEVEADSKAGLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASLGLG-------TPATPSPASKL----SLVCIPGHTPFHGMEPQALLPPSLAPSVVEMEEAALGKEAVAAAASNARLRAGAGDASFVANPDGTRTYNK 1479
RW+DSGWRVQ++D+ GRRDLR MSVDPPGCQDIDDAMHV+RK NGKLE+GVHIADVT+F+ AD LD+EARARATTVYLVHRRIDMLP LLSSDLCSLHAG DRLSVSV+WEAEE+G EDI + K ADGSPVCWFGRTVIHS ASMTYDQAQMLVE+G+I K H+EPP GQAGRDV EGLQP L+HDL LLTRFAR T R +R + GAIDLS GAELKFKIDP TGTPLAVAGKE+SEIHHTIAELMILANS VAEKI FPS +LVRVHA P+ S+L+AF+GVAA+VG +S SE +S GG+ +S G +G E SKAGLLKSLAVRAMSEAEYVSTGTLS+ ++ + G A RFGHFGLGLSHYTHFTSPIRRYADI VHRLLLASLG+ T T P +L P E LP SLAPSV+EMEEAA+G AAA RAGAGDASFV NPDGTRTY+K
Sbjct: 554 RWQDSGWRVQESDVAGRRDLRKE--RAMSVDPPGCQDIDDAMHVKRKPNGKLEIGVHIADVTRFVEADSPLDREARARATTVYLVHRRIDMLPALLSSDLCSLHAGEDRLSVSVVWEAEEDGDEDIRLCKGADGSPVCWFGRTVIHSKASMTYDQAQMLVEDGRIEKKKGHEEPPSGQAGRDVREGLQPGLAHDLRLLTRFAR-TARAERVRNGAIDLSQAGAELKFKIDPVTGTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNSTSESSGKPNSSAGGLSQSLATVEGGALRGQGE-GGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQA--HGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLPSGDGFNAPPAANRGDDDEGVLALPSSLAPSVMEMEEAAVGMVEADAAAERRPRRAGAGDASFVINPDGTRTYSK 1058
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: A0A6H5JSW4_9PHAE (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSW4_9PHAE) HSP 1 Score: 557 bits (1435), Expect = 5.370e-183 Identity = 329/493 (66.73%), Postives = 363/493 (73.63%), Query Frame = 1
Query: 49 RRDLRGAGLNTMSVDPPGCQDIDDAMHVRRKGNGKLEVGVHIADVTQFLVADGSLDKEARARATTVYLVHRRIDMLPTLLSSDLCSLHAGRDRLSVSVLWEAEENG-EDIVISKRADGSPVCWFGRTVIHSVASMTYDQAQMLVEEGKIRKPPNHKEPPPGQAGRDVGEGLQPALSHDLHLLTRFAR*TIRKQREKKGAIDLSNTGAELKFKIDPTTGTPLAVAGKEESEIHHTIAELMILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAARVGASS-SEGFAATLASVGGVGES-----GAGHKGPKEVEADSKAGLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASLGLG-----------TPATPSPASKLSLVCIPGHTPFHGMEPQALLPPSLAPSVVEMEEAALGKEAVAAAASNARLRAGAGDASFVANPDGTRTY 1473
RRDLR MSVDPPGCQDIDDAMHV+RK NGKLE+GVHIADVT+F+ AD LD+EARARATTVYLVHRRIDMLP LLSSDLCSLHAG DRLSVSV+WEAEE+G EDI I K ADGS VCWFGRTVIHS ASMTYDQAQMLVE+G+I K H+EPPPGQAGRDV EGLQP L+HDL LLTRFAR T R +R + GAIDLS GAELKFKIDP TGTPLAVAG+E+SEIH TIAELMILANS VAEKI FPS +LVRVHA P+ S+L+AF+GVAA+VG +S SE +S GG+ +S G +G E SKAGLLKSLAVRAMSEAEYVSTGTLS+ ++ + G A RFGHFGLGLS YTHFTSPIRRYADI VHRLLLASLG+ T P S P E LP SLAPSV+EMEE+A AAA AGAGDASFV NPDGTRT+
Sbjct: 164 RRDLRRE--RAMSVDPPGCQDIDDAMHVKRKPNGKLEIGVHIADVTRFVEADSPLDREARARATTVYLVHRRIDMLPALLSSDLCSLHAGEDRLSVSVVWEAEEDGDEDIRICKGADGSRVCWFGRTVIHSKASMTYDQAQMLVEDGRIDKKRRHEEPPPGQAGRDVREGLQPGLAHDLRLLTRFAR-TARAERVRNGAIDLSQAGAELKFKIDPVTGTPLAVAGQEDSEIHDTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNSTSESSGKPNSSAGGLSQSLATVEGGALRGQGE-GGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQA--HGKGLEAQEGSRFGHFGLGLSLYTHFTSPIRRYADIVVHRLLLASLGVSVTRASNATHHITKPPPRLLSGDGFNVHPAAKREEVDEGVIALPSSLAPSVMEMEESADVNLETDAAAERRSRSAGAGDASFVINPDGTRTH 650
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: A0A836CJZ0_9STRA (DIS3-like exonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ0_9STRA) HSP 1 Score: 378 bits (970), Expect = 4.070e-120 Identity = 223/428 (52.10%), Postives = 264/428 (61.68%), Query Frame = 1
Query: 4 WEDSGWRVQDADIIGRRDLRGAGLNTMSVDPPGCQDIDDAMHVRRKGNG----KLEVGVHIADVTQFLVADGSLDKEARARATTVYLVHRRIDMLPTLLSSDLCSLHAGRDRLSVSVLWEAE--ENGEDIVISKRADGSPVCWFGRTVIHSVASMTYDQAQMLVEEGKIRKPPNHKEPPPGQAGRDVGEGLQPALSHDLHLLTRFAR*TIRKQREKKGAIDLSNTGAELKFKIDPTTGTPLAVAGKEESEIHHTIAELMILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAARVGASSSEGFAATLASVGGVGESGAGHKGPKEVEADSKAG---LLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASLGLGTPATPSPAS 1260
W DSGW V + D R+DLRG G SVDPPGCQDIDDAMHVR G +LEVGVHIADV +F+ LD+EAR R TT YL HRR DMLP LL+ D+CSLH GRDRL+VSV WE E E+G+ G P + VI SVA+MTYDQA L+ +G+I P PPGQAG V L P LS DL LLT FAR +R+QR + GA+DL+ ELKFK+ P TG P+AV K E EI+HTIAELMILAN VAE + FPS++L+R HAP ++S+L VAA G S VG GA + +A AG LLKSLA R MSEA YV TGTL E + G +R HFGLG+ YTHFTSPIRRYAD+ VHRLLLA+ GLG A +P++
Sbjct: 82 WRDSGWTVPEEDSTARKDLRGGGYRVFSVDPPGCQDIDDAMHVREIGGSGMVRRLEVGVHIADVARFVAHGSPLDREARQRGTTTYLSHRRFDMLPALLAGDICSLHGGRDRLAVSVFWEVEQLEDGK---------GLPSQFGQNLVIRSVAAMTYDQAHTLITKGRISDQPPV---PPGQAGAPVPPDLHPPLSGDLKLLTLFAR-WLRQQRSESGALDLTKAEGELKFKLHPVTGLPVAVTAKAELEINHTIAELMILANRTVAETVLRAFPSAALLRTHAPVQASRLGLLQEVAAAAGISVE------------VGSGGALQASLERSQAARGAGVGALLKSLATRVMSEAVYVCTGTLDEHSAGGGVTG------ERLSHFGLGIGSYTHFTSPIRRYADVVVHRLLLAATGLGYAAEAAPSA 478
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: A0A3R7EMY2_9STRA (DIS3-like exonuclease 1 (Fragment) n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7EMY2_9STRA) HSP 1 Score: 297 bits (761), Expect = 1.170e-87 Identity = 205/461 (44.47%), Postives = 248/461 (53.80%), Query Frame = 1
Query: 19 WRVQDADIIGRRDLRGAGLNTMSVDPPGCQDIDDAMHVRRKGNGKLEVGVHIADVTQFLVADGSLDKEARARATTVYLVHRRIDMLPTLLSSDLCSLHAGRDRLSVSVLWEAEENGEDIVISKRADGSPVCWFGRTVIHSVASMTYDQAQMLVEEGKIRKPPNHKEPPPGQAGRDVGEGLQPALSHDLHLLTRFAR*TIRKQREKKGAIDLSNTGAELKFKIDPT-------------TGTPLAVAGKEESEIHHTIAELMILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAARVGASSSEGFAATLA-SVGGVGESGAGHKGPKEVEADSKAGLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASLGLGTPATPSPASKLSLVCIPGHTPFHGMEPQALLPPSLAPSVVEM 1359
W V +I GR DLR SVDPPGCQDIDDAM + R NG L++GVHIADV F+ D +LD EA+ RATTVYLV RR DMLP LLS DLCS+H GRDRL+ SV WE + +IV + F ++++HS A+MTY QA L++ P G AG+ + LQPAL DL LL R RK R GA+DLS+ G ELKF P +G L V K EIH TIAELMILANS VAE++ FP S+++R H PP ++ G+A+ G TL S+ V +V+ D+ A LLKS+A RAMSEAEY+ A R RFGH+GLGL YTHFTSPIRRYADI VHR L A+L P P +S F PQA LP S PSV+ M
Sbjct: 100 WHVPPDEIDGRLDLRSTH-RVFSVDPPGCQDIDDAMSISRLPNGHLQLGVHIADVGYFVSPDSALDLEAQNRATTVYLVDRRYDMLPVLLSGDLCSIHCGRDRLAFSVFWELDPATLEIVPTATT-------FAKSILHSAAAMTYYQADRLMDGLAADDPAAVNSVGTGTAGQPIAAALQPALREDLLLLREIGRALYRK-RAASGAVDLSS-GGELKFSKVPDDVLDADGDDGGRGSGGGLTVTTKAALEIHSTIAELMILANSTVAERLVAAFPQSAMLRRHVPPSGNRFDQLVGLASSQGLVLDTSTNMTLQRSLDAV-----------QVDDDTMA-LLKSMATRAMSEAEYI-------------CASEATGHRLRFGHYGLGLEFYTHFTSPIRRYADIVVHRQLQATLLETYPRPPXXXXLIST--------FLKRGPQAALPASRVPSVLSM 517
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: A0A7S4R116_9STRA (DIS3-like exonuclease 1 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R116_9STRA) HSP 1 Score: 297 bits (761), Expect = 2.950e-87 Identity = 193/412 (46.84%), Postives = 240/412 (58.25%), Query Frame = 1
Query: 19 WRVQDADIIGRRDLRGAGLNTMSVDPPGCQDIDDAMHVRRKGNGKLEVGVHIADVTQFLVADGSLDKEARARATTVYLVHRRIDMLPTLLSSDLCSLHAGRDRLSVSVLWEAEENGEDIVISKRADGSPVCWFGRTVIHSVASMTYDQAQMLVEEGKIRKPPNHKEPPPGQ---AGRDVGEGLQPALSHDLHLLTRFAR*TIRKQREK-KGAIDLSN--TGAELKFKIDPTTGTPLAVAGKEESEIHHTIAELMILANSYVAEKIHTTFPSSSLVRVHAPPESSKL----SAFDGVAARVGASSSEGFAATLASVGGVGESGAGHKGPKEVEADSKAGLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASL 1224
W + D+ RRDLR + SVDPPGCQDIDD MH + NG +EVGVHIADV+ F+ +LD+EA R TT YLV RR DMLP++LSSDLCSLH DRL+VSV+W V+S WFGR++IH+VA+MTY QA ++ KPP+ AG V L P+L DL +LT+ AR +RK RE+ GA+DLS+ G+ELKF +D G P V K E EIHHTIAELMI+AN +VA KIH FPSSSL+R H E ++ SAF S+ A +L G+ GA DS L +SLA RAMSEA+YV TG S + + G H+GLG+ YTHFTSPIRRYAD+ VHRLLLA++
Sbjct: 158 WSITPEDVSTRRDLR-SNCTIFSVDPPGCQDIDDTMHAKVLPNGDIEVGVHIADVSHFVPHHSALDREAMIRGTTFYLVDRRFDMLPSILSSDLCSLHGQVDRLAVSVIW---------VLSPDLKTVKSTWFGRSIIHNVAAMTYQQAHNILHN----KPPDXXXXXXXXXLTAGSPVDTKLIPSLKKDLTILTKLAR-ILRKNREEIGGAVDLSSGDRGSELKFSLDEN-GLPTKVVAKTEMEIHHTIAELMIMANGHVASKIHGHFPSSSLLRNHRTVEQNRFEDLESAFKAGGVSFDGRSNMALAESLRQAKASGKDGA--------VIDS---LFQSLATRAMSEAQYVCTG------SKEASVG--------LSHYGLGIEKYTHFTSPIRRYADVVVHRLLLAAV 528
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: A0A485L742_9STRA (DIS3-like exonuclease 1 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L742_9STRA) HSP 1 Score: 300 bits (768), Expect = 8.700e-87 Identity = 204/452 (45.13%), Postives = 250/452 (55.31%), Query Frame = 1
Query: 19 WRVQDADIIGRRDLRGAGLNTMSVDPPGCQDIDDAMHVRRKGNGKLEVGVHIADVTQFLVADGSLDKEARARATTVYLVHRRIDMLPTLLSSDLCSLHAGRDRLSVSVLWEAEENGEDIVISKRADGSPVCWFGRTVIHSVASMTYDQAQMLVEEGKIRKPPNHKEPPPGQAGRDVGEGLQPALSHDLHLLTRFAR*TIRKQREKKGAIDLSNTGAELKFKIDPTTGTPLAVAGKEESEIHHTIAELMILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAARVG----ASSSEGFAATLASVGGVGESGAGHKGPKEVEADSKAGLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASLGLGTPATPSPASKLSLVCIPGHTPFHGMEPQALLPPSLAPSVVEME 1362
W V D +I RRDLR SVDPPGCQDIDDAM + NG +E+GVHIADV F+ D +LD EA+ RATTVYLV RR DMLP LLS DLCS+H RDRL+ SV WE + IV K WFG+T++HSVA+MTY QA L++ P G AG+ + L+ AL DL +L R T+ + R +GA+DL+ G ELKF T L V K EIH TIAELMILANS VA+++ TFP S+++R H PP ++ A +AA G SS+ +L V VE D+ A LLKS+A RAMSEAEY+ A TA RFGH+GLGL YTHFTSPIRRYAD+ VHR L ASL G T A+ L+ G LP SL PSV+ ++
Sbjct: 520 WTVPDDEIARRRDLR-TSHRVFSVDPPGCQDIDDAMSIAHLPNGNIELGVHIADVGYFVAPDSALDLEAQNRATTVYLVDRRYDMLPVLLSGDLCSIHCARDRLAFSVFWELDATSLAIVGGKT-------WFGKTILHSVAAMTYGQADRLLDGLSADDPAIPNVVGVGTAGQPIAAALESALREDLVVLRAIGR-TLYRGRALQGAVDLTQ-GGELKFST--TDDGELRVGTKAALEIHSTIAELMILANSTVAQRLVETFPQSAMLRRHVPPSGNRFDALIALAATQGISLDTSSNMALQQSLDIV------------RDRVEPDTLA-LLKSMATRAMSEAEYICAS------EATGTA-------LRFGHYGLGLEFYTHFTSPIRRYADVVVHRQLFASLHAGERTT---ATTLTTTRTTG----------VKLPASLVPSVLGID 920
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: A0A1W0A8G9_9STRA (DIS3-like exonuclease 1 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8G9_9STRA) HSP 1 Score: 298 bits (763), Expect = 1.260e-86 Identity = 188/402 (46.77%), Postives = 236/402 (58.71%), Query Frame = 1
Query: 19 WRVQDADIIGRRDLRGAGLNTMSVDPPGCQDIDDAMHVRRKGNGKLEVGVHIADVTQFLVADGSLDKEARARATTVYLVHRRIDMLPTLLSSDLCSLHAGRDRLSVSVLWEAEENGEDIVISKRADGSPVCWFGRTVIHSVASMTYDQAQMLVEEGKIRKPPNHKEPPPGQAGRDVGEGLQPALSHDLHLLTRFAR*TIRKQREKKGAIDLSNTGAELKFKIDPTTGTPLAVAGKEESEIHHTIAELMILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAARVGASSSEGFAATLASVGGVGESGAGHKGPKEVEADSKAGLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASL 1224
W++ ++ RRDLR SVDPPGCQDIDDAM + + NG E+GVHIADV+ F+ AD SLDKEA+ RATTVYLV RR DMLP LLS DLCSLH RDRL+ SV WE + E + D + F +T++HSVA+MTY QA +L+ P ++ P G AG V LQP L DL LLT AR K R GA+DLS G ELKF + + + K+ EIH TIAELMILANS VAE++ FP ++L+R H PP + +A G TL + + + + V+ D+ A LLKS+A RAMSEAEY+ S GN +DRFGH+GLGL++YTHFTSPIRRYAD+ VHR L +L
Sbjct: 480 WQIPTDELQNRRDLRNTH-RVFSVDPPGCQDIDDAMSITQLPNGNYELGVHIADVSHFVEADSSLDKEAQHRATTVYLVDRRYDMLPVLLSGDLCSLHGRRDRLAFSVFWELNDRLEIL-----PDNTT---FAKTIVHSVAAMTYQQADLLILGLPADDPSSNAVVPEGTAGHPVDGELQPLLKKDLTLLTAIARGLYAK-RAAGGAVDLSQRG-ELKFSLSGENESDWKIGVKQALEIHSTIAELMILANSTVAERLVRFFPETALLRRHVPPSGDRFEQLLTLATTQGL--------TLDTTSNMTLQSSLVRIESTVDEDTMA-LLKSMATRAMSEAEYICA-------SQAQALGN----QDRFGHYGLGLTYYTHFTSPIRRYADVVVHRQLCETL 850
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: A0A3R7ANP5_9STRA (DIS3-like exonuclease 1 n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7ANP5_9STRA) HSP 1 Score: 295 bits (754), Expect = 8.550e-85 Identity = 203/461 (44.03%), Postives = 248/461 (53.80%), Query Frame = 1
Query: 19 WRVQDADIIGRRDLRGAGLNTMSVDPPGCQDIDDAMHVRRKGNGKLEVGVHIADVTQFLVADGSLDKEARARATTVYLVHRRIDMLPTLLSSDLCSLHAGRDRLSVSVLWEAEENGEDIVISKRADGSPVCWFGRTVIHSVASMTYDQAQMLVEEGKIRKPPNHKEPPPGQAGRDVGEGLQPALSHDLHLLTRFAR*TIRKQREKKGAIDLSNTGAELKFKIDPT-------------TGTPLAVAGKEESEIHHTIAELMILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAARVGASSSEGFAATLA-SVGGVGESGAGHKGPKEVEADSKAGLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASLGLGTPATPSPASKLSLVCIPGHTPFHGMEPQALLPPSLAPSVVEM 1359
W V +I R DLR SVDPPGCQDIDDAM + R NG L++GVHIADV F+ D +LD EA+ RATTVYLV RR DMLP LLS DLCS+H GRDRL+ SV WE + +IV + F ++++HS A+MTY QA L++ P G AG+ + LQPAL DL +L R RK R GA+DLS+ G ELKF P +G L V K EIH TIAELMILANS VAE++ FP S+++R H PP ++ +A+ G TL S+ V +V+ D+ A LLKS+A RAMSEAEY+ AG R RFGH+GLGL YTHFTSPIRRYADI VHR L A+L P P+ +S F PQA LP S PSV+ M
Sbjct: 474 WHVPPDEIDARLDLRSTH-RVFSVDPPGCQDIDDAMSISRLPNGHLQLGVHIADVGYFVSPDSALDLEAQNRATTVYLVDRRYDMLPVLLSGDLCSIHCGRDRLAFSVFWELDPATLEIVPTATT-------FAKSILHSAAAMTYYQADRLMDGLAADDPAAVNSVGTGTAGQAIAAALQPALREDLLMLREIGRALYRK-RAASGAVDLSS-GGELKFSKVPDDVLDADGDDGGRGSGGGLTVTTKAALEIHSTIAELMILANSTVAERLVAAFPQSAMLRRHVPPSGNRFDQLVALASSQGLVLDTSTNMTLQRSLDAV-----------QVDDDTMA-LLKSMATRAMSEAEYI-------------CAGEATGHRLRFGHYGLGLEFYTHFTSPIRRYADIVVHRQLQATLLETYPRPPTTRPLIST--------FLKRGPQAALPASRVPSVLSM 891
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: A0A067CUY6_SAPPC (DIS3-like exonuclease 1 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CUY6_SAPPC) HSP 1 Score: 293 bits (751), Expect = 1.350e-84 Identity = 204/447 (45.64%), Postives = 253/447 (56.60%), Query Frame = 1
Query: 19 WRVQDADIIGRRDLRGAGLNTMSVDPPGCQDIDDAMHVRRKGNGKLEVGVHIADVTQFLVADGSLDKEARARATTVYLVHRRIDMLPTLLSSDLCSLHAGRDRLSVSVLWEAEENGEDIVISKRADGSPVCWFGRTVIHSVASMTYDQAQMLVEEGKIRKPPNHKEPPPGQAGRDVGEGLQPALSHDLHLLTRFAR*TIRKQREKKGAIDLSNTGAELKFKIDPTTGTPLAVAGKEESEIHHTIAELMILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAARVGASSSEGFAATL-ASVGGVGESGAGHKGPKEVEADSKAGLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASLGLGTPATPSPASKLSLVCIPGHTPFHGMEPQALLPPSLAPSVVE 1356
W + A++ RRDLR +SVDPPGCQDIDDAM VR+ NG E+GVHIADV F+ D +LDK+AR RATTVYLV RR DMLP LLS DLCSLH DRL+ SV WE + + ++ R F +T++H+VA+MTY QA L+ + P + K G AGR + LQP L DL LL R + QR GA+DL+ +G ELKF I T V KE EIH TIAELMILAN+ VA ++ FP ++LVR H PP + + +AA S TL AS+ V S V+AD+ A LLKS+A RAMSEAEY+ A G F H+GLGLSHYTHFTSPIRRYAD+ VHR LLA+L T T + A+K P + +LP SL PSV++
Sbjct: 475 WTIPSAEVASRRDLRQTH-RVLSVDPPGCQDIDDAMSVRKLPNGHYELGVHIADVGHFVPFDSALDKDARHRATTVYLVDRRFDMLPVLLSGDLCSLHGQTDRLAFSVFWELDADLR--ILPHRTT------FAKTIVHNVAAMTYGQADRLLSDLPANDPLDTKVVGEGTAGRPIASHLQPMLRDDLKLLRAIGR-RLYAQRAATGAVDLTQSG-ELKFMI--TGEFDWRVEIKESLEIHGTIAELMILANATVATRLVDCFPKTALVRRHVPPSGDRFKSLLALAATQQLSLDTTSNMTLQASLDAVATS---------VDADTLA-LLKSMATRAMSEAEYI---------VASEAVGG-------FAHYGLGLSHYTHFTSPIRRYADLVVHRQLLATLAPTT--TTAVATK----------PVRAVA-SLVLPASLTPSVLD 869
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: A0A6G0XVG1_9STRA (DIS3-like exonuclease 1 n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVG1_9STRA) HSP 1 Score: 293 bits (750), Expect = 1.570e-84 Identity = 200/447 (44.74%), Postives = 249/447 (55.70%), Query Frame = 1
Query: 25 VQDADIIGRRDLRGAGLNTMSVDPPGCQDIDDAMHVRRKGNGKLEVGVHIADVTQFLVADGSLDKEARARATTVYLVHRRIDMLPTLLSSDLCSLHAGRDRLSVSVLWEAEENGEDIVISKRADGSPVCWFGRTVIHSVASMTYDQAQMLVEEGKIRKPPNHKEPPPGQAGRDVGEGLQPALSHDLHLLTRFAR*TIRKQREKKGAIDLSNTGAELKFKIDPTTGTPLAVAGKEESEIHHTIAELMILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAARVGASSSEGFAATLA-SVGGVGESGAGHKGPKEVEADSKAGLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASLGLGTPATPSPASKLSLVCIPGHTPFHGMEPQALLPPSLAPSVVEME 1362
V D +I RRD+R + SVDPPGCQDIDDAM V+ NG E+GVHIADV+ F++ D LD EAR RATTVYLV RR DMLP LLS DLCS+H RDRL+ SV WE + + +IV K F ++++HSVA+MTY QA L+ P PG AG+ + LQP L +DL +L R + QR +GA+DLS G ELKF D L V K EIH TIAELMILANS VA+++ TFP S+++R H PP ++ +AA G TL S+ V V+AD+ A LLKS+A RAMSEAEY+ A +R RFGH+GLGL YTHFTSPIRRYAD+ VHR L SL A P+P + + V LP SL PSV+ ++
Sbjct: 464 VSDDEIARRRDIRASHC-VFSVDPPGCQDIDDAMSVQELPNGHYELGVHIADVSHFVLPDTPLDLEARHRATTVYLVDRRYDMLPVLLSGDLCSIHCARDRLAFSVFWELDADF-NIVPGKTT-------FTKSILHSVAAMTYGQADRLLAGLSADDPAVANTVGPGTAGQPIDSKLQPRLGNDLTILRSIGR-KLLNQRTLQGAVDLSK-GGELKFSTDDDG--ELRVGTKAALEIHSTIAELMILANSTVAQRLVETFPQSAMLRRHVPPSGNRFDQLIELAASQGIHLDPSSNMTLQQSLNAV-----------NVDADTLA-LLKSMATRAMSEAEYI-------------CASEATGQRLRFGHYGLGLEFYTHFTSPIRRYADLIVHRQLQESLVQDGVAAPAPIAAVKKVA------------DIQLPASLTPSVLGID 860 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3938.10233.1 >prot_H-paniculata_contig3938.10233.1 ID=prot_H-paniculata_contig3938.10233.1|Name=mRNA_H-paniculata_contig3938.10233.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=250bp MILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAARVGASSSEGback to top mRNA from alignment at H-paniculata_contig3938:216..14320- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3938.10233.1 ID=mRNA_H-paniculata_contig3938.10233.1|Name=mRNA_H-paniculata_contig3938.10233.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14105bp|location=Sequence derived from alignment at H-paniculata_contig3938:216..14320- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3938:216..14320- >mRNA_H-paniculata_contig3938.10233.1 ID=mRNA_H-paniculata_contig3938.10233.1|Name=mRNA_H-paniculata_contig3938.10233.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1500bp|location=Sequence derived from alignment at H-paniculata_contig3938:216..14320- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |