prot_H-paniculata_contig3938.10233.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3938.10233.1
Unique Nameprot_H-paniculata_contig3938.10233.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length250
Homology
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: D8LN43_ECTSI (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN43_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 1.290e-59
Identity = 147/257 (57.20%), Postives = 167/257 (64.98%), Query Frame = 0
Query:    1 MILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAARVGASS-SEGFAATLASVGGVGES-----GAGHKGPKEVEADSKAGLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASLGLG-------TPATPSPASKL----SLVCIPGHTPFHGMEPQALLPPSLAPSVVEMEEAALGKEAVAAAASNARLRAGAGDASFVANPDGTRTYNK 240
            MILANS VAEKI   FPS +LVRVHA P+ S+L+AF+GVAA+VG +S SE      +S GG+ +S     G   +G  E    SKAGLLKSLAVRAMSEAEYVSTGTLS+ ++  +  G  A    RFGHFGLGLSHYTHFTSPIRRYADI VHRLLLASLG+        T  T  P  +L         P        E    LP SLAPSV+EMEEAA+G     AAA     RAGAGDASFV NPDGTRTY+K
Sbjct:  805 MILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNSTSESSGKPNSSAGGLSQSLATVEGGALRGQGE-GGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQA--HGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLPSGDGFNAPPAANRGDDDEGVLALPSSLAPSVMEMEEAAVGMVEADAAAERRPRRAGAGDASFVINPDGTRTYSK 1058          
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: A0A6H5JSW4_9PHAE (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSW4_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 1.420e-52
Identity = 140/255 (54.90%), Postives = 159/255 (62.35%), Query Frame = 0
Query:    1 MILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAARVGASS-SEGFAATLASVGGVGES-----GAGHKGPKEVEADSKAGLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASLGLG-----------TPATPSPASKLSLVCIPGHTPFHGMEPQALLPPSLAPSVVEMEEAALGKEAVAAAASNARLRAGAGDASFVANPDGTRTY 238
            MILANS VAEKI   FPS +LVRVHA P+ S+L+AF+GVAA+VG +S SE      +S GG+ +S     G   +G  E    SKAGLLKSLAVRAMSEAEYVSTGTLS+ ++  +  G  A    RFGHFGLGLS YTHFTSPIRRYADI VHRLLLASLG+            T   P   S       P        E    LP SLAPSV+EMEE+A       AAA      AGAGDASFV NPDGTRT+
Sbjct:  399 MILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNSTSESSGKPNSSAGGLSQSLATVEGGALRGQGE-GGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQA--HGKGLEAQEGSRFGHFGLGLSLYTHFTSPIRRYADIVVHRLLLASLGVSVTRASNATHHITKPPPRLLSGDGFNVHPAAKREEVDEGVIALPSSLAPSVMEMEESADVNLETDAAAERRSRSAGAGDASFVINPDGTRTH 650          
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: A0A836CJZ0_9STRA (DIS3-like exonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ0_9STRA)

HSP 1 Score: 120 bits (300), Expect = 2.990e-27
Identity = 80/170 (47.06%), Postives = 97/170 (57.06%), Query Frame = 0
Query:    1 MILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAARVGASSSEGFAATLASVGGVGESGAGHKGPKEVEADSKAG---LLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASLGLGTPATPSPAS 167
            MILAN  VAE +   FPS++L+R HAP ++S+L     VAA  G S              VG  GA     +  +A   AG   LLKSLA R MSEA YV TGTL E  +     G      +R  HFGLG+  YTHFTSPIRRYAD+ VHRLLLA+ GLG  A  +P++
Sbjct:  327 MILANRTVAETVLRAFPSAALLRTHAPVQASRLGLLQEVAAAAGISVE------------VGSGGALQASLERSQAARGAGVGALLKSLATRVMSEAVYVCTGTLDEHSAGGGVTG------ERLSHFGLGIGSYTHFTSPIRRYADVVVHRLLLAATGLGYAAEAAPSA 478          
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: A0A3R7ANP5_9STRA (DIS3-like exonuclease 1 n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7ANP5_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.880e-22
Identity = 83/201 (41.29%), Postives = 103/201 (51.24%), Query Frame = 0
Query:    1 MILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAARVGASSSEGFAATLA-SVGGVGESGAGHKGPKEVEADSKAGLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASLGLGTPATPSPASKLSLVCIPGHTPFHGMEPQALLPPSLAPSVVEM 200
            MILANS VAE++   FP S+++R H PP  ++      +A+  G         TL  S+  V           +V+ D+ A LLKS+A RAMSEAEY+              AG     R RFGH+GLGL  YTHFTSPIRRYADI VHR L A+L    P  P+    +S         F    PQA LP S  PSV+ M
Sbjct:  724 MILANSTVAERLVAAFPQSAMLRRHVPPSGNRFDQLVALASSQGLVLDTSTNMTLQRSLDAV-----------QVDDDTMA-LLKSMATRAMSEAEYI-------------CAGEATGHRLRFGHYGLGLEFYTHFTSPIRRYADIVVHRQLQATLLETYPRPPTTRPLIST--------FLKRGPQAALPASRVPSVLSM 891          
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: A0A3R7EMY2_9STRA (DIS3-like exonuclease 1 (Fragment) n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7EMY2_9STRA)

HSP 1 Score: 105 bits (261), Expect = 4.960e-22
Identity = 83/201 (41.29%), Postives = 102/201 (50.75%), Query Frame = 0
Query:    1 MILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAARVGASSSEGFAATLA-SVGGVGESGAGHKGPKEVEADSKAGLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASLGLGTPATPSPASKLSLVCIPGHTPFHGMEPQALLPPSLAPSVVEM 200
            MILANS VAE++   FP S+++R H PP  ++     G+A+  G         TL  S+  V           +V+ D+ A LLKS+A RAMSEAEY+              A      R RFGH+GLGL  YTHFTSPIRRYADI VHR L A+L    P  P     +S         F    PQA LP S  PSV+ M
Sbjct:  350 MILANSTVAERLVAAFPQSAMLRRHVPPSGNRFDQLVGLASSQGLVLDTSTNMTLQRSLDAV-----------QVDDDTMA-LLKSMATRAMSEAEYI-------------CASEATGHRLRFGHYGLGLEFYTHFTSPIRRYADIVVHRQLQATLLETYPRPPXXXXLIST--------FLKRGPQAALPASRVPSVLSM 517          
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: A0A096PAC4_OSTTA (DIS3-like exonuclease 1 n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PAC4_OSTTA)

HSP 1 Score: 102 bits (255), Expect = 3.260e-21
Identity = 72/161 (44.72%), Postives = 94/161 (58.39%), Query Frame = 0
Query:    1 MILANSYVAEKIHTTFPSSSLVRVHAPP------ESSKLSAFDGVAARVGASSSEGFAATLASVGGVGESGAGHKGPKEVEADSKAGLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASL 155
            MILANS  A   H+ FPS +L+R HAPP      E S+L+A  GV  ++  SS E   A+LA +         ++   EV       L K LA RAMSEA+YVS+G++S   S+             FGH+GL L++YTHFTSPIRRYADI VHR L+A++
Sbjct:  703 MILANSAAARATHSVFPSCALLRRHAPPRQDGFAELSRLAATKGV--KLDCSSGEALNASLARIA--------NECDPEVTT-----LFKGLATRAMSEAQYVSSGSISATESS-------------FGHYGLALTYYTHFTSPIRRYADIVVHRQLIAAV 835          
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: A0A8K1FML7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FML7_PYTOL)

HSP 1 Score: 102 bits (255), Expect = 3.340e-21
Identity = 83/210 (39.52%), Postives = 109/210 (51.90%), Query Frame = 0
Query:    1 MILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAAR----VGASSSEGFAATLASVGGVGESGAGHKGPKEVEADSKA-GLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASLGLGTPATPSPASKLSLVCIPGHTPFHGMEPQALLPPSLAPSVVEMEEAAL 205
            MILANSYVA+KI T FPS++L+R H PP  ++      +A      + AS +     +L +              +   AD+K   LLKSLAVR MSEAEY+     SE  ++ N        +  F H+GLGL +YTHFTSPIRRYADI VHR LLA++ L             ++   G+           LP SL PSV+E +EA L
Sbjct:  800 MILANSYVAKKIVTAFPSNALLRRHPPPSGARFDQLICIAQTKDILIDASDNYTLQQSLVNA------------ERSGRADAKTMALLKSLAVRVMSEAEYICANA-SEATTSQN------GDKTSFAHYGLGLQYYTHFTSPIRRYADIIVHRQLLAAIALD-----GRGQSRQILRAQGNM-SDSKTASLALPQSLTPSVLEDDEAFL 984          
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: A0A662YGG3_9STRA (DIS3-like exonuclease 1 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGG3_9STRA)

HSP 1 Score: 102 bits (255), Expect = 3.350e-21
Identity = 83/207 (40.10%), Postives = 113/207 (54.59%), Query Frame = 0
Query:    1 MILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVA-AR---VGASSSEGFAATLASVGGVGESGAGHKGPKEVEADSKA-GLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASLGLGTPATPSPASKLSLVCIPGHTPFHGMEPQALLPPSLAPSVVEMEE 202
            MILANS VA ++   FP+ +L+R H PP   + S    +A AR   + A+S+     +LA+              +    DSK   LLKSLAVR M+EAEYVS+G ++   +AD  A N       F H+GLGL  YTHFTSPIRRYAD+ VHR LLA++    P++ S  ++          P  G+     LP SL PSV+E ++
Sbjct:  814 MILANSTVARRLVERFPTHALLRRHPPPSGDRFSQLVQLAKARDVVIDATSNFTLQQSLAAA------------ERSGRMDSKTMSLLKSLAVRVMTEAEYVSSGAVA---AADAAAANGDVTP--FAHYGLGLQFYTHFTSPIRRYADVIVHRQLLAAIAPPRPSSHSMPTR----------PVAGIATPLTLPASLTPSVLEEDD 993          
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: W2QZJ8_PHYPN (DIS3-like exonuclease 1 n=11 Tax=Phytophthora TaxID=4783 RepID=W2QZJ8_PHYPN)

HSP 1 Score: 102 bits (254), Expect = 4.530e-21
Identity = 81/207 (39.13%), Postives = 113/207 (54.59%), Query Frame = 0
Query:    1 MILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVA-AR---VGASSSEGFAATLASVGGVGESGAGHKGPKEVEADSKA-GLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASLGLGTPATPSPASKLSLVCIPGHTPFHGMEPQALLPPSLAPSVVEMEE 202
            MI ANS VA ++   FP+ +L+R H PP   + +    +A AR   + A+++     +LA+              +    DSK   LLKSLAVR M+EAEYVS+G ++   + D    N  A R  F H+GLGL +YTHFTSPIRRYAD+ VHR LLAS+   +P   S   + + +  P            +LP +LAPSV+E E+
Sbjct:  806 MIFANSTVARRLVERFPTHALLRRHPPPSGDRFTQLVQLAKARDVVIDATNNFTLQQSLAAA------------ERSGRMDSKTMSLLKSLAVRVMTEAEYVSSGAVA---AGDAATANGDATR--FAHYGLGLQYYTHFTSPIRRYADVIVHRQLLASIVAPSPLPKSVLQQPASITAP-----------LILPKTLAPSVLETED 984          
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Match: A0A6G0XVG1_9STRA (DIS3-like exonuclease 1 n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVG1_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.110e-20
Identity = 80/202 (39.60%), Postives = 103/202 (50.99%), Query Frame = 0
Query:    1 MILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAARVGASSSEGFAATLA-SVGGVGESGAGHKGPKEVEADSKAGLLKSLAVRAMSEAEYVSTGTLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRLLLASLGLGTPATPSPASKLSLVCIPGHTPFHGMEPQALLPPSLAPSVVEME 201
            MILANS VA+++  TFP S+++R H PP  ++      +AA  G         TL  S+  V            V+AD+ A LLKS+A RAMSEAEY+              A     +R RFGH+GLGL  YTHFTSPIRRYAD+ VHR L  SL     A P+P + +  V                LP SL PSV+ ++
Sbjct:  696 MILANSTVAQRLVETFPQSAMLRRHVPPSGNRFDQLIELAASQGIHLDPSSNMTLQQSLNAV-----------NVDADTLA-LLKSMATRAMSEAEYI-------------CASEATGQRLRFGHYGLGLEFYTHFTSPIRRYADLIVHRQLQESLVQDGVAAPAPIAAVKKVA------------DIQLPASLTPSVLGID 860          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3938.10233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN43_ECTSI1.290e-5957.20DIS3-like exonuclease 1 n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSW4_9PHAE1.420e-5254.90DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJZ0_9STRA2.990e-2747.06DIS3-like exonuclease 1 n=1 Tax=Tribonema minus Ta... [more]
A0A3R7ANP5_9STRA2.880e-2241.29DIS3-like exonuclease 1 n=11 Tax=Aphanomyces astac... [more]
A0A3R7EMY2_9STRA4.960e-2241.29DIS3-like exonuclease 1 (Fragment) n=5 Tax=Aphanom... [more]
A0A096PAC4_OSTTA3.260e-2144.72DIS3-like exonuclease 1 n=2 Tax=Ostreococcus tauri... [more]
A0A8K1FML7_PYTOL3.340e-2139.52Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662YGG3_9STRA3.350e-2140.10DIS3-like exonuclease 1 n=2 Tax=Nothophytophthora ... [more]
W2QZJ8_PHYPN4.530e-2139.13DIS3-like exonuclease 1 n=11 Tax=Phytophthora TaxI... [more]
A0A6G0XVG1_9STRA1.110e-2039.60DIS3-like exonuclease 1 n=2 Tax=Aphanomyces euteic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001900Ribonuclease II/RPFAMPF00773RNBcoord: 1..154
e-value: 7.8E-24
score: 84.6
IPR031192DIS3-like exonuclease 1PANTHERPTHR23355:SF30DIS3-LIKE EXONUCLEASE 1coord: 1..171
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 1..171
IPR022966Ribonuclease II/R, conserved sitePROSITEPS01175RIBONUCLEASE_IIcoord: 124..148
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3938contigH-paniculata_contig3938:216..4894 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3938.10233.1mRNA_H-paniculata_contig3938.10233.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3938 216..14320 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3938.10233.1 ID=prot_H-paniculata_contig3938.10233.1|Name=mRNA_H-paniculata_contig3938.10233.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=250bp
MILANSYVAEKIHTTFPSSSLVRVHAPPESSKLSAFDGVAARVGASSSEG
FAATLASVGGVGESGAGHKGPKEVEADSKAGLLKSLAVRAMSEAEYVSTG
TLSERRSADNTAGNHAARRDRFGHFGLGLSHYTHFTSPIRRYADIAVHRL
LLASLGLGTPATPSPASKLSLVCIPGHTPFHGMEPQALLPPSLAPSVVEM
EEAALGKEAVAAAASNARLRAGAGDASFVANPDGTRTYNKVCVIHTDRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001900RNase_II/R
IPR031192DIS3L
IPR022966RNase_II/R_CS
IPR012340NA-bd_OB-fold