mRNA_H-paniculata_contig39337.10225.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig39337.10225.1 vs. uniprot
Match: A0A7R9YAC1_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAC1_9STRA) HSP 1 Score: 100 bits (248), Expect = 8.790e-23 Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 1
Query: 19 KRFELARFDLVHHLNQLETKKKFQLVDRTCSALYAFLGLFHQCHLLVANTEPQMRELQNALEQSRK 216
KR ELARFDLVH LNQLE KKKFQLV+R C+ LYA LG FHQCH+++AN EP+MR+LQ AL+ +RK
Sbjct: 319 KRHELARFDLVHELNQLEMKKKFQLVERVCNGLYAELGYFHQCHIVMANMEPRMRDLQLALQLARK 384
BLAST of mRNA_H-paniculata_contig39337.10225.1 vs. uniprot
Match: A0A6H5L2J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J8_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 1.200e-22 Identity = 48/75 (64.00%), Postives = 64/75 (85.33%), Query Frame = 1
Query: 1 EVAMAKKRFELARFDLVHHLNQLETKKKFQLVDRTCSALYAFLGLFHQCHLLVANTEPQMRELQNALEQSRKVST 225
EVA++KKRFE+ARFD VHHL+QLETKKK ++V RTC+AL+AFL LF +C+ LVA+TE ++REL+ AL SR+ S+
Sbjct: 154 EVALSKKRFEMARFDFVHHLSQLETKKKHEVVGRTCTALHAFLALFQRCNGLVASTEQRLRELECALTLSRQASS 228
BLAST of mRNA_H-paniculata_contig39337.10225.1 vs. uniprot
Match: A0A835ZCL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCL2_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.650e-22 Identity = 54/101 (53.47%), Postives = 61/101 (60.40%), Query Frame = 1
Query: 4 VAMAKKRFELARFDLVHHLNQLETKKKFQL------------------------------VDRTCSALYAFLGLFHQCHLLVANTEPQMRELQNALEQSRK 216
VA ++RFEL+RFDLVHHLNQLETKKKFQL V+R CSALYAFLG FHQCH LVA EP MR+LQ+AL +RK
Sbjct: 506 VAATRRRFELSRFDLVHHLNQLETKKKFQLAVGQRLARQNKKRGTLSTGDAQRLAFAVDEVERVCSALYAFLGYFHQCHTLVATVEPSMRDLQHALHLARK 606
BLAST of mRNA_H-paniculata_contig39337.10225.1 vs. uniprot
Match: A0A7S1U8B4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8B4_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 3.370e-21 Identity = 42/66 (63.64%), Postives = 53/66 (80.30%), Query Frame = 1
Query: 19 KRFELARFDLVHHLNQLETKKKFQLVDRTCSALYAFLGLFHQCHLLVANTEPQMRELQNALEQSRK 216
KR ELARFDLVH LNQLE +KKFQ+ +R C+ LYA LG FHQCH+++A EP MR++Q+AL +RK
Sbjct: 255 KRHELARFDLVHELNQLEMRKKFQIAERVCNGLYADLGFFHQCHIVMATLEPSMRDMQHALSVARK 320
BLAST of mRNA_H-paniculata_contig39337.10225.1 vs. uniprot
Match: D7FVG0_ECTSI (Centaurin, beta 5, isoform CRA_a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVG0_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 1.720e-20 Identity = 46/72 (63.89%), Postives = 61/72 (84.72%), Query Frame = 1
Query: 1 EVAMAKKRFELARFDLVHHLNQLETKKKFQLVDRTCSALYAFLGLFHQCHLLVANTEPQMRELQNALEQSRK 216
EVA++KKRFE+ARFDLV HL+ LETKKK ++V RTC+AL+AFL LF +C+ LVA+TE ++REL+ AL SR+
Sbjct: 37 EVALSKKRFEMARFDLVRHLSLLETKKKHEVVGRTCTALHAFLALFQRCNGLVASTEQRLRELECALTLSRQ 108
BLAST of mRNA_H-paniculata_contig39337.10225.1 vs. uniprot
Match: A0A4D9CVE4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVE4_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 2.010e-16 Identity = 41/67 (61.19%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 16 KKRFELARFDLVHHLNQLETKKKFQLVDRTCSALYAFLGLFHQCHLLVANTEPQMRELQNALEQSRK 216
++R+EL R DLV+ LNQLETKKKFQLV+R ALYA+LG FHQ H +A EP MR+LQ L SR+
Sbjct: 489 RRRYELGRIDLVNTLNQLETKKKFQLVERVLCALYAYLGYFHQGHEALAAIEPSMRDLQCQLSLSRR 555
BLAST of mRNA_H-paniculata_contig39337.10225.1 vs. uniprot
Match: A0A662XKE9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XKE9_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 2.410e-15 Identity = 40/72 (55.56%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 1 EVAMAKKRFELARFDLVHHLNQLETKKKFQLVDRTCSALYAFLGLFHQCHLLVANTEPQMRELQNALEQSRK 216
EV A++RFELARFDLV +LN+L+ KKF LV+ S LYA LG FH CH LV EP +RE Q ++ SR+
Sbjct: 427 EVVQARRRFELARFDLVRYLNRLDCMKKFVLVECFNSTLYALLGHFHACHELVKAVEPALRERQEMMQVSRQ 498
BLAST of mRNA_H-paniculata_contig39337.10225.1 vs. uniprot
Match: D0N718_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N718_PHYIT) HSP 1 Score: 77.0 bits (188), Expect = 1.150e-14 Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 1 EVAMAKKRFELARFDLVHHLNQLETKKKFQLVDRTCSALYAFLGLFHQCHLLVANTEPQMRELQNALEQSRK 216
+V A++RFELARFDLV H+N+++ KKF LV+ S LYA LG FH CH L+ + EP +R Q ++ SRK
Sbjct: 704 DVVTARRRFELARFDLVRHMNRVDCMKKFVLVECFNSILYAQLGHFHACHELIKSVEPSLRRRQEMMQLSRK 775
BLAST of mRNA_H-paniculata_contig39337.10225.1 vs. uniprot
Match: A0A0P1ANE9_PLAHL (Arf-gap with coiled-ank repeat and ph domain-containing protein 2-like isoform x1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ANE9_PLAHL) HSP 1 Score: 76.6 bits (187), Expect = 1.560e-14 Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = 1
Query: 1 EVAMAKKRFELARFDLVHHLNQLETKKKFQLVDRTCSALYAFLGLFHQCHLLVANTEPQMRELQNALEQSRK 216
EV +A++RFELARFDLV ++N++++ KK+ LV+ S +YA LG FH CH LV + EP +R+ Q L+ SRK
Sbjct: 362 EVLIARRRFELARFDLVRYMNRIDSMKKYVLVECFNSIMYAQLGHFHACHELVKSIEPSLRKRQEMLQVSRK 433
BLAST of mRNA_H-paniculata_contig39337.10225.1 vs. uniprot
Match: H3GSJ5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSJ5_PHYRM) HSP 1 Score: 76.3 bits (186), Expect = 2.140e-14 Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 1
Query: 1 EVAMAKKRFELARFDLVHHLNQLETKKKFQLVDRTCSALYAFLGLFHQCHLLVANTEPQMRELQNALEQSRK 216
+V +A++RFELARFDLV ++N+++ KKF LV+ S LYA LG FH CH LV + EP +R+ Q ++ SRK
Sbjct: 360 DVVVARRRFELARFDLVRYMNRIDCMKKFVLVECFNSILYAQLGHFHACHELVKSVEPTLRKRQEMMQVSRK 431 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39337.10225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig39337.10225.1 >prot_H-paniculata_contig39337.10225.1 ID=prot_H-paniculata_contig39337.10225.1|Name=mRNA_H-paniculata_contig39337.10225.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp MAKKRFELARFDLVHHLNQLETKKKFQLVDRTCSALYAFLGLFHQCHLLVback to top mRNA from alignment at H-paniculata_contig39337:82..321- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig39337.10225.1 ID=mRNA_H-paniculata_contig39337.10225.1|Name=mRNA_H-paniculata_contig39337.10225.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=240bp|location=Sequence derived from alignment at H-paniculata_contig39337:82..321- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig39337:82..321- >mRNA_H-paniculata_contig39337.10225.1 ID=mRNA_H-paniculata_contig39337.10225.1|Name=mRNA_H-paniculata_contig39337.10225.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=462bp|location=Sequence derived from alignment at H-paniculata_contig39337:82..321- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |