prot_H-paniculata_contig11584.1018.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11584.1018.1
Unique Nameprot_H-paniculata_contig11584.1018.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length39
Homology
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BLAST of mRNA_H-paniculata_contig11584.1018.1 vs. uniprot
Match: D8LH17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH17_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 6.340e-9
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:    1 VKDRLFDLERSVETAEWTGRKLQRENEGLQALIQRNRKR 39
            VK+RLFDLERSVE AEW+ RKL +ENEGLQ LI RNR+R
Sbjct:  356 VKERLFDLERSVEMAEWSERKLAKENEGLQGLISRNRQR 394
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11584.1018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH17_ECTSI6.340e-976.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11584contigH-paniculata_contig11584:564..680 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11584.1018.1mRNA_H-paniculata_contig11584.1018.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11584 564..680 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11584.1018.1 ID=prot_H-paniculata_contig11584.1018.1|Name=mRNA_H-paniculata_contig11584.1018.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=39bp
VKDRLFDLERSVETAEWTGRKLQRENEGLQALIQRNRKR
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