prot_H-paniculata_contig3898.10159.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3898.10159.1
Unique Nameprot_H-paniculata_contig3898.10159.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length370
Homology
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BLAST of mRNA_H-paniculata_contig3898.10159.1 vs. uniprot
Match: D7G308_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G308_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 8.710e-23
Identity = 71/159 (44.65%), Postives = 96/159 (60.38%), Query Frame = 0 
Query:   32 KLGRSYSEAGSVALREVWQ-ASGATCATAFKEEARTQYSLQLKSVSLEAAAEQRYFNEWARRERLEQSTARYCRPRQAPRLGEPGWTWAGRSTRLERTAAEEQRKAEASRKVQEAASET-----YRIAIEAALEAGARLGAAQILAAEALDRAMDETLG 184
            +L  + + A    LR  W   +GA CA  +  EA  + SLQ  S S   A +Q+YF+EWARRERLE S  RYCRP + PR GEPGWTWA  S R+ R  AE  RK E ++  ++ A++      Y  A+EAA + G   G A+ILAAEA+++A++ T G
Sbjct:  185 RLPHTMAAAELAPLRAAWDDGAGALCAEKYSSEATRRGSLQAVSTSSTTAQDQKYFDEWARRERLEDSAGRYCRPHRPPRWGEPGWTWADHSERVLRERAEATRKEEENKARRQEAADGHAKMFYEAAVEAAKKNGVSPGTAKILAAEAVEKALEGTNG 343
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BLAST of mRNA_H-paniculata_contig3898.10159.1 vs. uniprot
Match: A0A6H5KD78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD78_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 3.200e-21
Identity = 78/174 (44.83%), Postives = 100/174 (57.47%), Query Frame = 0 
Query:   27 EVPVPKLGRSYSEAGSVALREVWQ-ASGATCATAFKEEARTQYSLQLKSVSLEAAAEQRYFNEWARRERLEQSTARYCRPRQAPRLGEPGWTWAGRSTRL-----ERTAAEEQRKA---EASR---KVQEAASET----YRIAIEAALEAGARLGAAQILAAEALDRAMDETLG 184
            EV +P    + + A    LR  W   +G  CA  +  EA  + SLQ  S S   A EQ+YF+EWARRERLE S  RYCRP + PR GEPGWTWA  S R+     E T  EE+ KA   EA+    KV  A+S      Y  A+EAA + G  LG A+ILAAEA+++A+++  G
Sbjct:  151 EVRIP---HTMAAAELAPLRAAWDDGAGTLCAEKYSSEATRRGSLQAMSPSSTTAQEQKYFDEWARRERLEDSVGRYCRPHRPPRWGEPGWTWADHSERVLRERAEATRTEEENKARRQEAANGHAKVSSASSVRSVIFYEAAVEAAKKNGVSLGTAKILAAEAVEKALEDANG 321
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3898.10159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G308_ECTSI8.710e-2344.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KD78_9PHAE3.200e-2144.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 128..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3898contigH-paniculata_contig3898:10588..12672 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3898.10159.1mRNA_H-paniculata_contig3898.10159.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3898 10586..12672 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3898.10159.1 ID=prot_H-paniculata_contig3898.10159.1|Name=mRNA_H-paniculata_contig3898.10159.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=370bp
TSAGGAGDRDALENSQKTGKSSVPLLEVPVPKLGRSYSEAGSVALREVWQ
ASGATCATAFKEEARTQYSLQLKSVSLEAAAEQRYFNEWARRERLEQSTA
RYCRPRQAPRLGEPGWTWAGRSTRLERTAAEEQRKAEASRKVQEAASETY
RIAIEAALEAGARLGAAQILAAEALDRAMDETLGAGVSEEAQLAARERVV
KAVRLMAEGADGEAAAARSRKQVDGVVDPESLHDRSLDSEVIFDKGRRRE
RRNLVATGAAKDEVTIAFYPGGRGPRLIPSPHTNPDAPIADVSVVSVLSP
SGSGQSIPPPMCPLRLVDLMEEALHVAADTPSSEEKMWDPTVAALSDGAA
AAAERARSRTQGSMGRMLTA
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