prot_H-paniculata_contig3893.10153.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3893.10153.1
Unique Nameprot_H-paniculata_contig3893.10153.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1640
Homology
BLAST of mRNA_H-paniculata_contig3893.10153.1 vs. uniprot
Match: D8LC53_ECTSI (Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC53_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 1.040e-30
Identity = 118/298 (39.60%), Postives = 160/298 (53.69%), Query Frame = 0
Query:   47 RHQYEGIVIYLMRLVNKPTTSQGLELWEGMDPGWEKVLRSKAQARMENAEEGGEDPAAAQTSARSPSGVGAV----STPSTAHNSIQSVGSARGLG-----PARTPSALQFGNR------MSISVQSSQTESMSPPRVAISTTHQVFFVGGCCTARAKPQVDLPLHELKPKKRRKRRRPSAICMTIFFAGIAETSSQMHQQPLAYIRAGAVSRVRANRRIRAERRGSGDGRRREYSTDPAEVLAWQASKAKNAQQERLIAKAREALLEEQREAAM--EASTTTLGDDDTSVDTLNTAE 327
            RHQYEGIV+YLM LVN P TSQGL+LWEG+DP WEK+LRS+AQAR+E+  E         ++A + +G+ +V    +TPST  NS++S  SA GLG     PAR       G+R            + + + M PPR   ++T          +A +  QV   +H  +   R +    +A       AG A +SS   +       +   S  R  RR R      G+   R +S   A+VLAWQA+K K+A+Q RLI KAREAL E + EA M    S T+LGDD+ S+DT NTA+
Sbjct:  118 RHQYEGIVVYLMGLVNNPETSQGLKLWEGLDPSWEKMLRSRAQARVEDGTEEDVGKPQEMSTAAAAAGLSSVRLGVTTPSTTRNSLRSSESAMGLGVSNRTPARRDVFSTSGSRDRGGXXXXXXXXTRERKMMMPPRGETASTKGSTKERKIMSAPSAAQVQPGVHHQRTTARNRGSDSAAPA-----AGTAMSSSDGARVDGTRSGSRPSSATRRRRRSREGDAPPGETSPRVFSNGAADVLAWQATKVKSAKQGRLIEKAREALRETEHEAEMARSRSMTSLGDDEGSIDTCNTAD 410          
BLAST of mRNA_H-paniculata_contig3893.10153.1 vs. uniprot
Match: A0A6H5J6H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6H7_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 8.040e-27
Identity = 114/299 (38.13%), Postives = 152/299 (50.84%), Query Frame = 0
Query:   47 RHQYEGIVIYLMRLVNKPTTSQGLELWEGMDPGWEKVLRSKAQARMENAEEGGEDPAAAQTSARSPSGVGAV----STPSTAHNSIQSVGSARGLG-----PARTPSALQFGNR------MSISVQSSQTESMSPPRVAISTTHQVFFVGGCCTARAKPQVDLPLHELKPKKRRKRRRPSAICMTIFFAGIAETSSQMHQQPLAYIRAGAVSRVRANRRIRAER-RGSGDGRRREYSTDPAEVLAWQASKAKNAQQERLIAKAREALLEEQREA--AMEASTTTLGDDDTSVDTLNTAE 327
            RHQY+GI IYLM LVN P TSQ L+LWEG+DP WEK+LRS+AQAR+E+  E         ++A + +G+ +V    +TPST HNS+ S  SA G+G     PAR       GNR                    PPR   ++T          +A++  QV   +H  +   R    R S        AG++ +              GA        R+  ER    G+   R +S   A+VLAWQA+K K+A+Q RLI KAREAL E + EA  A   S T+LGDD+ S+DT NTA+
Sbjct:  200 RHQYKGIAIYLMGLVNNPETSQELKLWEGLDPSWEKMLRSRAQARVEDGTEEDVGRPRDMSTAAAAAGLSSVRLGVTTPSTTHNSLMSSESAMGIGVSNRTPARRDVFSTSGNRDRGXXXXXXXXXXXXXXXXXPPRGQAASTKGXXXXXXXMSAQSAAQVQPGVHHQRTTTRN---RGSGSASPAAGAGMSSSD-------------GA--------RVDGERDEPPGETSPRVFSNGAADVLAWQATKVKSAKQGRLIEKAREALRETEYEAELARSRSMTSLGDDEASIDTCNTAD 474          
BLAST of mRNA_H-paniculata_contig3893.10153.1 vs. uniprot
Match: A0A8B6GL30_MYTGA (NF-kappa-B inhibitor-like protein 2 n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GL30_MYTGA)

HSP 1 Score: 58.2 bits (139), Expect = 3.090e-6
Identity = 25/58 (43.10%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    1 RNEFAQTPLHAACVSGNIDVVQRLVQGGADISAQDAAEDTPFHEACRHQYEGIVIYLM 58
            RNE  +TPLH AC+ GN+  VQ+L++ G  ++ +D     P HEA  H    IV+YL+
Sbjct:   15 RNEKGETPLHRACIEGNLKKVQKLIEQGHPVNPRDHCGWIPLHEAANHDVYEIVLYLL 72          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3893.10153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LC53_ECTSI1.040e-3039.60Ankyrin domain protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5J6H7_9PHAE8.040e-2738.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8B6GL30_MYTGA3.090e-643.10NF-kappa-B inhibitor-like protein 2 n=1 Tax=Mytilu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 281..303
NoneNo IPR availablePFAMPF13637Ank_4coord: 7..57
e-value: 7.2E-9
score: 36.0
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 4..33
e-value: 4.2E-4
score: 29.6
coord: 37..66
e-value: 34.0
score: 13.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 4..36
score: 13.624
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..112
e-value: 1.0E-13
score: 53.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 4..59
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..59
score: 17.98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3893contigH-paniculata_contig3893:689..13146 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3893.10153.1mRNA_H-paniculata_contig3893.10153.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3893 689..13147 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3893.10153.1 ID=prot_H-paniculata_contig3893.10153.1|Name=mRNA_H-paniculata_contig3893.10153.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1640bp
RNEFAQTPLHAACVSGNIDVVQRLVQGGADISAQDAAEDTPFHEACRHQY
EGIVIYLMRLVNKPTTSQGLELWEGMDPGWEKVLRSKAQARMENAEEGGE
DPAAAQTSARSPSGVGAVSTPSTAHNSIQSVGSARGLGPARTPSALQFGN
RMSISVQSSQTESMSPPRVAISTTHQVFFVGGCCTARAKPQVDLPLHELK
PKKRRKRRRPSAICMTIFFAGIAETSSQMHQQPLAYIRAGAVSRVRANRR
IRAERRGSGDGRRREYSTDPAEVLAWQASKAKNAQQERLIAKAREALLEE
QREAAMEASTTTLGDDDTSVDTLNTAEGDSNTAGTPRIMVDRVPQAGSGG
SGGGDGSNSHHYHHHNHPTINESNGVYSKPPIPIAKVNGSMIRTQGGRET
LSSSARAGAGTGEAGEVMNDSGSGRRSSASLVASRENAPVRVPSHDKEKR
HRASGGYGCHRSETIELESSGRAMRCSTPRPMTSPPATFRDAKWHASTPL
REGRRRAMRKGKPVALASPRAREPGTHNGFTYAPSSSSRRSERRSIALPA
GPTGGGSSSSGNSRSTRPPLGADGHGQPPVEMGLGFGGGGGSDRHPSTVT
NASSMSRRGDGRDRASEREYYRREKETAKSSSSGGHGERELSVSGSSRRR
NSSGNRERERFSPRPGSRRHSSGGQWEGEQSSPRSGRRYRRPAAAGSTPD
RGGVPHHLEHCRADGSNGAVAEAGSVQQRSDRHTSSSSGGNKLGSTFPRR
SSRGHGDHRDHRRSADGRHHHGPGSGHSADRASPDLTDKASSQRSVRRDA
SAGAAGAAGPISSATGAPAAKVSYPVRSFKRIDSLSQAIRAAHVGNDNDG
GRETKEGAPIAAAAPAAGRDVQEMVNQAILDARGGGEGTSEEDARGNEDR
VAVPSKKAAARPDRKSYDSTAGNEESLVATRSSGTRKMHSRSPTSKWPNL
SGRGSPRHLPKSWDMTEFLPERRTTVLAFDLPVKRPSPYRTRLSSTSTSE
RGQRPLKANNGTTKQQGSRQKLSGSRGRKEQRVSGAGERRVAGSFEDECP
PGMEALQVKDGVGVGSANDSLAPPQHVNRPSSQVNQAAAMAADVDAAPTE
ESPRPRKSWLAAVQRSSKAVAMAFGASQNLIFTESENVDKSSSGKQQAES
AAAVPTSPTLVNSGDGGVSSPKPSDVDVTWDRDIEATLEASADRAASSYI
RKRSGEILTGSLDVNTSELGKRALWGISDPLILADSLSETLANAGEPPAP
TEELIPVKLELVAVVPTEESISVVTTVSASSRRTSIVSPSAPPRLALSKV
SRVPKATSVVAPPAATEAVIAETQSLRVPEVEHAEATAPATTVEDEVVIK
EGGKDEVVVVDEKNGEELHSVAATGVLPPRSASQVTSTAFFPATAESINP
GVPRSRSMLGLPGRAPAKVAMPIAGGRAAWNEFLAAAEVNPAGAGAGAGA
GAGAGAGASENGTGSRVEDSTRISPPDVGASADIVHGECTGATLEDGEAG
DKSTAAAALALESRGPPRGFKALVAAEGPNKGPAGAYPGNSMWRLAAGAS
SAAARTREGVAANGHGGYSNPLAVMRANDGGGAGGSVAGGSGAATSGSVT
NPLAGLRGVGAMAVSGRANPLARGGVTNPLARGGGLGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom