mRNA_H-paniculata_contig3882.10133.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3882.10133.1
Unique NamemRNA_H-paniculata_contig3882.10133.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A6H5JWH3_9PHAE (Monogalactosyldiacylglycerol synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWH3_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 8.120e-90
Identity = 143/183 (78.14%), Postives = 161/183 (87.98%), Query Frame = 1
Query:    1 GGDGVGKLQDIATKVADRLATDHHPGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALGRPRASLDIARSIVSNLMPGIDEHTQSSSRPAS 549
            GGDGVGKL DIATKVADRLA+DHHPGQ+VVVCGTN K REALE +SWP +GSGV V++LGFVSNMDEWM+ASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVT+N FGLYR++P DIAHEVSDLL DREKLE MG +A ++GRP A+LDIARS+VS ++PG+ E  Q  S   S
Sbjct:  383 GGDGVGKLHDIATKVADRLASDHHPGQLVVVCGTNNKTREALEAHSWPGEGSGVNVRVLGFVSNMDEWMSASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTDNHFGLYRKKPRDIAHEVSDLLGDREKLEAMGRNAMSMGRPHATLDIARSLVSTMLPGVTEVEQPPSPSTS 565          
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: D8LHP4_ECTSI (Monogalactosyldiacylglycerol synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHP4_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 6.280e-68
Identity = 111/129 (86.05%), Postives = 122/129 (94.57%), Query Frame = 1
Query:    1 GGDGVGKLQDIATKVADRLATDHHPGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHE 387
            GGDGVGKL DIATKVADRLA+DHHPGQVVVVCGTN K+REALE ++WP +GSGV V++LGFVSNMDEWM+ASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVT+N FGLYR++P DIAHE
Sbjct:  362 GGDGVGKLHDIATKVADRLASDHHPGQVVVVCGTNNKMREALEAHAWPGEGSGVNVRVLGFVSNMDEWMSASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTDNHFGLYRKKPRDIAHE 490          
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A835YZJ8_9STRA (Monogalactosyldiacylglycerol synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZJ8_9STRA)

HSP 1 Score: 199 bits (506), Expect = 1.270e-55
Identity = 100/171 (58.48%), Postives = 126/171 (73.68%), Query Frame = 1
Query:    1 GGDGVGKLQDIATKVADRLATDHHPGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALGRPRASLDIARSIVSNLMPGI 513
            GGDGVG+L +IA  VAD+L+ D    Q+VVVCG NE +R AL+   WP     V V +LGF+ ++D +MAA+D+LVTKAGPGTIAEAC  G+P+ILSSFLPGQE+GNVP+VTE  FG Y  RP  IAH VS LL D  +L+EMG  AR+ GRPRA+LDIA  +V  ++P +
Sbjct:  211 GGDGVGRLSEIAHSVADQLSADMPLSQLVVVCGRNEAVRAALQARPWPPN---VQVTVLGFIPHLDMYMAAADVLVTKAGPGTIAEACALGVPLILSSFLPGQESGNVPFVTEGGFGTYEHRPRGIAHAVSALLLDPPRLQEMGRKARSAGRPRATLDIAADLVQTMLPPV 378          
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A7S2BT71_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BT71_9STRA)

HSP 1 Score: 172 bits (435), Expect = 3.330e-47
Identity = 90/164 (54.88%), Postives = 113/164 (68.90%), Query Frame = 1
Query:    1 GGDGVGKLQDIATKVADRLATDHHPGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALGRPRASLDIARSIV 492
            GGDGVG +  IA  + D L    HP Q+VVVCG+N KI++ +E  ++  K   V V + GFVSNM+++MAASD +VTKAGPGTIAEA  RGLP +LS FLPGQEAGNVP+VTE  FG Y  +P  IA  V+D +A  ++L EM   A+  GRP A+ DIAR I 
Sbjct:   22 GGDGVGGIAKIAEALGDELKDVEHPSQLVVVCGSNAKIKKKIEEMTFNPK---VKVSVQGFVSNMEDFMAASDCIVTKAGPGTIAEAMCRGLPTMLSCFLPGQEAGNVPFVTEGGFGEYSNKPGQIASTVADWIAHPDQLSEMQHAAKEAGRPSATYDIARDIA 182          
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A7S1TX56_9STRA (Monogalactosyldiacylglycerol synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX56_9STRA)

HSP 1 Score: 177 bits (450), Expect = 4.280e-47
Identity = 95/170 (55.88%), Postives = 114/170 (67.06%), Query Frame = 1
Query:    1 GGDGVGKLQDIATKVADRLATDHH-PGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALGRPRASLDIARSIVSNLMP 507
            GGDGVG++  IAT++A  L  D   P Q+ V+CG NE+++  LE   WPE    V V + GFV NMDEWM ASD +VTKAGPGTIAEAC  GLP++LS+FLPGQEAGNVP+V +  FG Y  RP  IA  VS  L D +KLEEM   +   GRP A+  IAR I S L P
Sbjct:  248 GGDGVGRIGKIATELAMELGADGGGPAQMAVICGKNEELKAQLEAQKWPEN---VHVSVQGFVRNMDEWMGASDCIVTKAGPGTIAEACASGLPIMLSAFLPGQEAGNVPFVVKGGFGAYNTRPKVIAKTVSGWLKDPKKLEEMSRKSLNAGRPEATKAIARDIGSLLYP 414          
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A6H5K8U7_9PHAE (Monogalactosyldiacylglycerol synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8U7_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 6.100e-44
Identity = 92/163 (56.44%), Postives = 109/163 (66.87%), Query Frame = 1
Query:    1 GGDGVGKLQDIATKVADRLATDHHPGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALGRPRASLDIARSI 489
            GGDGVG LQ IA  V  +L  D    QVVVVCGTN +++ +LE  SW    S V + + GFVSNMDEWM A D +VTKAGPGTIAEA  RGLP++LS+FLPGQEAGNVP+VTE  FG + + PA IA  VS  L D   L EM + AR   RP+A+  I   I
Sbjct:  293 GGDGVGGLQGIADSVGHKLGEDKAETQVVVVCGTNNEVKTSLEKGSW---ASNVHMHVKGFVSNMDEWMGAVDCIVTKAGPGTIAEAMIRGLPIMLSAFLPGQEAGNVPFVTEGGFGSFSKDPAKIADTVSRWLRDDALLAEMSSKAREASRPQATYKICSDI 452          
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A6U2C4A3_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2C4A3_HEMAN)

HSP 1 Score: 160 bits (405), Expect = 1.560e-43
Identity = 86/162 (53.09%), Postives = 107/162 (66.05%), Query Frame = 1
Query:   13 VGKLQDIATKVADRLATDHHPGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALG--RPRASLDIARSIV 492
            VG L+ +A  V +RL       QVVVVCG NEK++ ALE   WP+    V+VK+LGFV+NMD++M A+D LVTKAGPGTIAEA   GLP +LS FLPGQEAGN+PYVT+N FG + + P  +A  V   L   +KL EM   A  +G    RA+ DIAR I 
Sbjct:    1 VGGLEKVAANVGERLKEFDGKAQVVVVCGKNEKVKAALEERPWPDN---VSVKVLGFVTNMDDYMVAADCLVTKAGPGTIAEASITGLPTMLSGFLPGQEAGNIPYVTQNGFGGFEKDPRKLADCVKTWLGQPDKLAEMSERASRVGMVHARATKDIAREIA 159          
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A7S0VI56_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VI56_9CRYP)

HSP 1 Score: 160 bits (404), Expect = 1.930e-43
Identity = 82/155 (52.90%), Postives = 105/155 (67.74%), Query Frame = 1
Query:    1 GGDGVGKLQDIATKVADRLATDHHPGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALGRPRA 465
            GGDGVG L+ IA  V D+L       QVVVVCG NEK++ AL + +WPE    V+V++LGFV+NMD++M A+D LVTKAGPGTIAEA   GLP +LS FLPGQEAGN+PYVTEN FG + + P  +   V + L   ++L  M   A  +G+  A
Sbjct:    6 GGDGVGGLERIAANVGDKLGGFEGKAQVVVVCGKNEKVKAALASRAWPEN---VSVRVLGFVTNMDDYMVAADCLVTKAGPGTIAEASITGLPTMLSGFLPGQEAGNIPYVTENGFGGFEKDPKRLGERVKEWLGQPDELAAMSERAGRVGQVHA 157          
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A8J2WFQ1_9STRA (Monogalactosyldiacylglycerol synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WFQ1_9STRA)

HSP 1 Score: 168 bits (425), Expect = 4.460e-43
Identity = 88/170 (51.76%), Postives = 109/170 (64.12%), Query Frame = 1
Query:    1 GGDGVGKLQDIATKVADRLATDHHPGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALGRPRASLDIARSIVSNLMPG 510
            GGDGVG +  +AT + D L     P  +VVVCG N ++++ LE   WP+    V   ILGFV NMDEWMAASD +VTKAGPGTIAEA TRGLP +LSS LPGQEAGNV +V EN FG + ++PA I   ++   +D    E + + A    RP A+LDIAR I   L  G
Sbjct:  294 GGDGVGGIAKVATALGDALGEAKDPSGLVVVCGKNAQVKKELEERQWPDN---VKPTILGFVDNMDEWMAASDCIVTKAGPGTIAEAATRGLPCLLSSHLPGQEAGNVKFVVENGFGAFVKKPAKIGETIAKWFSDLNLRERLSSKALEAARPSATLDIARDIGGLLFEG 460          
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A7S1XF87_9RHOD (Monogalactosyldiacylglycerol synthase n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XF87_9RHOD)

HSP 1 Score: 166 bits (419), Expect = 1.180e-42
Identity = 88/165 (53.33%), Postives = 112/165 (67.88%), Query Frame = 1
Query:    1 GGDGVGKLQDIATKVADRLATDHHP--GQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALGRPRASLDIARSI 489
            GGDGVG +  +A  VA RL         QVVV+CG NE ++  L    +P     V V++ G+V+NM EWMAA D +VTKAGPGTIAEA  RGLP+ILS++LPGQE GNVP+VT+   G + + PA+IA  V+   +D  KL+EM   ARA+GRPRA+ DIARSI
Sbjct:  232 GGDGVGGVGPVARAVAKRLGASEKSMKSQVVVICGKNENLKRELLATDFP-----VPVRVEGYVNNMSEWMAACDTIVTKAGPGTIAEALIRGLPIILSAYLPGQETGNVPFVTDAGVGSFSRDPAEIAETVASWFSDETKLQEMSKKARAMGRPRATYDIARSI 391          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWH3_9PHAE8.120e-9078.14Monogalactosyldiacylglycerol synthase n=1 Tax=Ecto... [more]
D8LHP4_ECTSI6.280e-6886.05Monogalactosyldiacylglycerol synthase n=1 Tax=Ecto... [more]
A0A835YZJ8_9STRA1.270e-5558.48Monogalactosyldiacylglycerol synthase n=1 Tax=Trib... [more]
A0A7S2BT71_9STRA3.330e-4754.88Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1TX56_9STRA4.280e-4755.88Monogalactosyldiacylglycerol synthase n=1 Tax=Phae... [more]
A0A6H5K8U7_9PHAE6.100e-4456.44Monogalactosyldiacylglycerol synthase n=1 Tax=Ecto... [more]
A0A6U2C4A3_HEMAN1.560e-4353.09Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0VI56_9CRYP1.930e-4352.90Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A8J2WFQ1_9STRA4.460e-4351.76Monogalactosyldiacylglycerol synthase n=1 Tax=Pela... [more]
A0A7S1XF87_9RHOD1.180e-4253.33Monogalactosyldiacylglycerol synthase n=1 Tax=Comp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3882contigH-paniculata_contig3882:1346..4567 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score127.5
Seed ortholog evalue4.4e-27
Seed eggNOG ortholog2880.D8LHP4
Preferred nameMGD1
KEGG rclassRC00005,RC00059
KEGG koko:K03715
KEGG ReactionR02691
KEGG Pathwayko00561,ko01100,map00561,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006643,GO:0006664,GO:0006950,GO:0006996,GO:0007154,GO:0007275,GO:0008150,GO:0008152,GO:0008194,GO:0008378,GO:0008610,GO:0009058,GO:0009247,GO:0009267,GO:0009507,GO:0009526,GO:0009527,GO:0009528,GO:0009536,GO:0009605,GO:0009657,GO:0009668,GO:0009706,GO:0009707,GO:0009790,GO:0009791,GO:0009793,GO:0009941,GO:0009987,GO:0009991,GO:0010027,GO:0010154,GO:0016020,GO:0016036,GO:0016043,GO:0016740,GO:0016757,GO:0016758,GO:0019374,GO:0019752,GO:0019866,GO:0019867,GO:0022414,GO:0031090,GO:0031667,GO:0031668,GO:0031669,GO:0031967,GO:0031968,GO:0031969,GO:0031975,GO:0032501,GO:0032502,GO:0032787,GO:0033554,GO:0035250,GO:0042170,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046467,GO:0046509,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050896,GO:0051716,GO:0061024,GO:0061458,GO:0071496,GO:0071704,GO:0071840,GO:0098588,GO:0098805,GO:1901135,GO:1901137,GO:1901576,GO:1903509
EggNOG free text desc.1,2-diacylglycerol 3-beta-galactosyltransferase activity
EggNOG OGs2QPXV@2759,COG0707@1
EC2.4.1.46
COG Functional cat.M
CAZyGT28
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Exons4
Model size1452
Cds size378
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3882.10133.1prot_H-paniculata_contig3882.10133.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3882 2228..3811 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930190.7309358-UTR-H-paniculata_contig3882:1345..22271622930190.7309358-UTR-H-paniculata_contig3882:1345..2227Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3882 1346..2227 -
1691481184.819103-UTR-H-paniculata_contig3882:1345..22271691481184.819103-UTR-H-paniculata_contig3882:1345..2227Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3882 1346..2227 -
1622930190.7868075-UTR-H-paniculata_contig3882:3811..39611622930190.7868075-UTR-H-paniculata_contig3882:3811..3961Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3882 3812..3961 -
1691481184.861056-UTR-H-paniculata_contig3882:3811..39611691481184.861056-UTR-H-paniculata_contig3882:3811..3961Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3882 3812..3961 -
1622930190.8078828-UTR-H-paniculata_contig3882:4525..45671622930190.8078828-UTR-H-paniculata_contig3882:4525..4567Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3882 4526..4567 -
1691481184.8733988-UTR-H-paniculata_contig3882:4525..45671691481184.8733988-UTR-H-paniculata_contig3882:4525..4567Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3882 4526..4567 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930190.7463648-CDS-H-paniculata_contig3882:2227..24881622930190.7463648-CDS-H-paniculata_contig3882:2227..2488Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3882 2228..2488 -
1691481184.8327994-CDS-H-paniculata_contig3882:2227..24881691481184.8327994-CDS-H-paniculata_contig3882:2227..2488Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3882 2228..2488 -
1622930190.7586923-CDS-H-paniculata_contig3882:3073..31481622930190.7586923-CDS-H-paniculata_contig3882:3073..3148Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3882 3074..3148 -
1691481184.8420753-CDS-H-paniculata_contig3882:3073..31481691481184.8420753-CDS-H-paniculata_contig3882:3073..3148Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3882 3074..3148 -
1622930190.7717342-CDS-H-paniculata_contig3882:3769..38111622930190.7717342-CDS-H-paniculata_contig3882:3769..3811Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3882 3770..3811 -
1691481184.8513827-CDS-H-paniculata_contig3882:3769..38111691481184.8513827-CDS-H-paniculata_contig3882:3769..3811Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3882 3770..3811 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3882.10133.1

>prot_H-paniculata_contig3882.10133.1 ID=prot_H-paniculata_contig3882.10133.1|Name=mRNA_H-paniculata_contig3882.10133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp
MDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTEN
KFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALGRPRASLDIARSIV
SNLMPGIDEHTQSSSRPASSSSSSS*
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mRNA from alignment at H-paniculata_contig3882:1346..4567-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3882.10133.1 ID=mRNA_H-paniculata_contig3882.10133.1|Name=mRNA_H-paniculata_contig3882.10133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3222bp|location=Sequence derived from alignment at H-paniculata_contig3882:1346..4567- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGGGCGACGGGGTGGGGAAGCTGCAGGACATCGCCACCAAGGTGTGTGT GTGTATGTGTGTTTGTGTCTGAGAGAGAGAAAGCGCAGTAGACGGCCAAA TTAAACATACAAGCAAGTAGAGCCACGACCACGCTAACCATTGCAGTTGG TGCTTGTTACTCGATCCACGGACTCGGTGCTCTCGCAGTGAGGGCTCGTA TATCAGGCAGCGCTGCTCGCTACTATATACTACGGTCGCGTCAAAATTCG TGTTTGACGAATTACTTTGTATACATTTGAAATAACTGCTCCGAAATGAA GCCATGATCTTGTAAAATACACAGTACGCTTGAATGCCTATGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTGTTTTTGTATAATGAAAAGGGCGTGGCTC ATCACAGGAACACAGGGGAACCCGTGGTAGGCCGGGGTGGGAGGGGTGGG AGGGCATAGTTGTTGACACTCATCGCCCAAAAGACTGATCACATAAGGGA AGGATGAGGCTGCATGCACACCTATTGCAAGAAACAGGTCAAGTAATCGA AAACTAGCTTATAGATCGGCCGGGCACACTCGATTTTTCTGGGAAATTTA TCGCAGGTGGCGGATCGGTTGGCGACGGATCACCACCCGGGGCAAGTGGT GGTGGTATGCGGCACCAATGAGAAGATACGGGAGGCACTAGAGAATTACT CGTGGCCAGAGAAAGGCAGCGGGGTGACAGTGAAGATCTTGGGGTTCGTG TCGAATATGGACGAGTGGATGGCAGCCTCAGACCTCTTGGTGACTAAGGT ACTATCATCGATCATATTCATATCTACCTCTAGATACCTCCTGCTTGTAT GTCTGCAATTTCCAACTTGCTCATAAGAAAGGTTGGGGCTGAGATTTGAA TTTCTAAAGAAAATGGCATTTGGAAGAGAGTATTAAGGTGAAATTGCAGC CCTGTATTACCTCATATATAAATGTATTTTGCAAATACGGGTTTCCTTGT GTCGCCTGGATATGAAATGCATCCTAAGCATAGTTTAAAGTTTGTTGGGA GTATCGAGCAGGTTGGTGTTGTCTGTACCTTTTTTTTTTTTCGCTGTCTG TAGTGGCCGTCGAGGACAGTAGAGTTCATTGATTACCCTCTCTTCTATTT TTACAATACCGGGAGTTTTTTTTTTAGTGAGGATAGTGATGGTAGTGTTG GTGATGGTAATGGTGGTGGTGCCTGTCGGAGATGTTGAAGCGCCTCTGTT CTCACAACTGAGTATACTTATGAGACAGAGGAAGTACATATATATATATA TATAAATATGTAATCCCCTGAAGTATCTCATTTTCTGTCTCATTTTTATT ATATTTTTTTTGTCGTGTGTATGTGTATGTGTATGTGTGTATGTGTGTAT TTGTGTTTGTCTTTCACAGGCTGGACCAGGGACGATTGCAGAGGCATGCA CGAGGGGCCTTCCTGTCATCTTGTCTTCTTTCTTGCCAGGGCAGGTCAGT GATGATTATTCAGTAATCGCTCACTCTCCAGCCAGTCTACCATATTTATA ATAAATGACTTTAGAGCTCTTTTGAGAGCTCTCTTCAAGGAGCGAGTGTT CACTGTCTCGTTCTGCGATGGCAAGGGGCGTATACGCTGTTTTTATAACA AGGGCACCGTCTCCTGGGAGGGTTGAAACCGAGGGTTGATTAGGATTGTT TTACTAAAAGCGAGTCGAAAACCATTTCGCGTGCTCGATGCGCTTGGGGG TGTCAGTGACACAAACAAGTGTGGCTTGAATGGCGACCACCCACCTCCTC ATTTCGTATGTAAGGGCGACTCCAATTGAAACGGACATAGCAGATACCGC TTAATTGAATTTTTCATTCCATAGGAGGAGACCGATGGTGTAAAAGCCCT TCCGCATACGTGACACACCGGAACTCTAAATGTGAATTTTACTTTTTGTA ACTGGGCACATGATACACGAACAAAACGGACACAAGAAAAAAATCCGGTC CACCACGATCACAAAAGAAACAAATGGAAACAAATATGACATTAACAATT GTACTTCGCTGTTATACTTGATCCTGCAGGAAGCCGGCAACGTTCCGTAC GTGACCGAGAACAAGTTCGGTCTGTATCGACAGAGGCCCGCGGATATCGC GCACGAAGTCAGCGACTTGCTGGCGGACCGCGAAAAGTTGGAGGAAATGG GGGCGCACGCCCGGGCGCTGGGCCGACCGCGCGCCTCGCTCGACATCGCG CGTTCCATCGTCAGTAATCTTATGCCTGGCATAGATGAGCATACCCAGTC ATCATCCAGACCTGCATCATCATCGTCATCATCTTCCTGAAGGAAAAAGC ACGAGGAAAATGGCAATGTCGGATTTTGTGGTGGGGGCTATATGACATGT TATGTCAAATTAGTTGGTGCTTCTTTTAGTTGAAATTAAACCATTCCTTC CGAATATTGTTTGTCGCTCCATCACCGAATGAACGGTGTTAATTTTTTTT TTTAAAGGCGCATTTTTTTTTTTTCCCTTGGTTTTAGGTGGGGGGGGTTG GACGTGGGGTTGGTTTGTAGACGGCGCAAGGGTTGAGGATTTGATAGAGA TGGGGAGAGGGATAGAGCGAATTGGATGCTTGGGAAGGCAGGGAAGGGAG CCATAACTAAGGAGCATTGGTGAAGTTTCACTTTTTCCCACAGCAATACT CCGCCCCCCCCCCCTCCTCTCCCCCCTGTATTTCAGCCGCATTGTATTGG GTGATCGGGACACTTACCGAGGTGCGACAAGAAAATATTAGGAGTGCCAC ATTTGGCAGAACCCTGGGGCTATGAGGCACTCAACGGTTCACGTTGTCTA CCGTTGACGGGGTGTGTGAGAGCGGGACCCAAGGAGACACTCTTAGAGTA TATTTCGTTTGTTTCTGGTGATGAGAGACAGTCACGCTTATTTTTTTTCT TCTCGCGTAGAAATTGTATGGCATTCAAGCACCCGAAAAATTGTTGTGGT GGATGGGGATGGATGGGTCGAGCACGGTCGGTCGGTGGGTGAAAAGCGAC ATTTCTACAGTTGGTAATATTTGGATGGGAGAGAGCCTTTCTCGCCAGTT TTATTCCGTACGTGGTCGTCAAAATAGAGCTTCTGTGCATTCAACACAAT TGCTATTTTTTGCTTGCTTGACTTAATTCACCCTTCAGGCACATAACTAA TCTATATCCGAATCCTATTCTT
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Coding sequence (CDS) from alignment at H-paniculata_contig3882:1346..4567-

>mRNA_H-paniculata_contig3882.10133.1 ID=mRNA_H-paniculata_contig3882.10133.1|Name=mRNA_H-paniculata_contig3882.10133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=756bp|location=Sequence derived from alignment at H-paniculata_contig3882:1346..4567- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACGAGTGGATGGCAGCCTCAGACCTCTTGGTGACTAAGATGGACGA
GTGGATGGCAGCCTCAGACCTCTTGGTGACTAAGGCTGGACCAGGGACGA
TTGCAGAGGCATGCACGAGGGGCCTTCCTGTCATCTTGTCTTCTTTCTTG
CCAGGGCAGGCTGGACCAGGGACGATTGCAGAGGCATGCACGAGGGGCCT
TCCTGTCATCTTGTCTTCTTTCTTGCCAGGGCAGGAAGCCGGCAACGTTC
CGTACGTGACCGAGAACAAGTTCGGTCTGTATCGACAGAGGCCCGCGGAT
ATCGCGCACGAAGTCAGCGACTTGCTGGCGGACCGCGAAAAGTTGGAGGA
AATGGGGGCGCACGCCCGGGCGCTGGGCCGACCGCGCGCCTCGCTCGACA
TCGCGCGTTCCATCGTCAGTAATCTTATGCCTGGCATAGATGAGCATACC
CAGTCATCATCCAGACCTGCATCATCATCGTCATCATCTTCCTGAGAAGC
CGGCAACGTTCCGTACGTGACCGAGAACAAGTTCGGTCTGTATCGACAGA
GGCCCGCGGATATCGCGCACGAAGTCAGCGACTTGCTGGCGGACCGCGAA
AAGTTGGAGGAAATGGGGGCGCACGCCCGGGCGCTGGGCCGACCGCGCGC
CTCGCTCGACATCGCGCGTTCCATCGTCAGTAATCTTATGCCTGGCATAG
ATGAGCATACCCAGTCATCATCCAGACCTGCATCATCATCGTCATCATCT
TCCTGA
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