mRNA_H-paniculata_contig3882.10133.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A6H5JWH3_9PHAE (Monogalactosyldiacylglycerol synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWH3_9PHAE) HSP 1 Score: 294 bits (752), Expect = 8.120e-90 Identity = 143/183 (78.14%), Postives = 161/183 (87.98%), Query Frame = 1
Query: 1 GGDGVGKLQDIATKVADRLATDHHPGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALGRPRASLDIARSIVSNLMPGIDEHTQSSSRPAS 549
GGDGVGKL DIATKVADRLA+DHHPGQ+VVVCGTN K REALE +SWP +GSGV V++LGFVSNMDEWM+ASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVT+N FGLYR++P DIAHEVSDLL DREKLE MG +A ++GRP A+LDIARS+VS ++PG+ E Q S S
Sbjct: 383 GGDGVGKLHDIATKVADRLASDHHPGQLVVVCGTNNKTREALEAHSWPGEGSGVNVRVLGFVSNMDEWMSASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTDNHFGLYRKKPRDIAHEVSDLLGDREKLEAMGRNAMSMGRPHATLDIARSLVSTMLPGVTEVEQPPSPSTS 565
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: D8LHP4_ECTSI (Monogalactosyldiacylglycerol synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHP4_ECTSI) HSP 1 Score: 235 bits (600), Expect = 6.280e-68 Identity = 111/129 (86.05%), Postives = 122/129 (94.57%), Query Frame = 1
Query: 1 GGDGVGKLQDIATKVADRLATDHHPGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHE 387
GGDGVGKL DIATKVADRLA+DHHPGQVVVVCGTN K+REALE ++WP +GSGV V++LGFVSNMDEWM+ASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVT+N FGLYR++P DIAHE
Sbjct: 362 GGDGVGKLHDIATKVADRLASDHHPGQVVVVCGTNNKMREALEAHAWPGEGSGVNVRVLGFVSNMDEWMSASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTDNHFGLYRKKPRDIAHE 490
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A835YZJ8_9STRA (Monogalactosyldiacylglycerol synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZJ8_9STRA) HSP 1 Score: 199 bits (506), Expect = 1.270e-55 Identity = 100/171 (58.48%), Postives = 126/171 (73.68%), Query Frame = 1
Query: 1 GGDGVGKLQDIATKVADRLATDHHPGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALGRPRASLDIARSIVSNLMPGI 513
GGDGVG+L +IA VAD+L+ D Q+VVVCG NE +R AL+ WP V V +LGF+ ++D +MAA+D+LVTKAGPGTIAEAC G+P+ILSSFLPGQE+GNVP+VTE FG Y RP IAH VS LL D +L+EMG AR+ GRPRA+LDIA +V ++P +
Sbjct: 211 GGDGVGRLSEIAHSVADQLSADMPLSQLVVVCGRNEAVRAALQARPWPPN---VQVTVLGFIPHLDMYMAAADVLVTKAGPGTIAEACALGVPLILSSFLPGQESGNVPFVTEGGFGTYEHRPRGIAHAVSALLLDPPRLQEMGRKARSAGRPRATLDIAADLVQTMLPPV 378
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A7S2BT71_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BT71_9STRA) HSP 1 Score: 172 bits (435), Expect = 3.330e-47 Identity = 90/164 (54.88%), Postives = 113/164 (68.90%), Query Frame = 1
Query: 1 GGDGVGKLQDIATKVADRLATDHHPGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALGRPRASLDIARSIV 492
GGDGVG + IA + D L HP Q+VVVCG+N KI++ +E ++ K V V + GFVSNM+++MAASD +VTKAGPGTIAEA RGLP +LS FLPGQEAGNVP+VTE FG Y +P IA V+D +A ++L EM A+ GRP A+ DIAR I
Sbjct: 22 GGDGVGGIAKIAEALGDELKDVEHPSQLVVVCGSNAKIKKKIEEMTFNPK---VKVSVQGFVSNMEDFMAASDCIVTKAGPGTIAEAMCRGLPTMLSCFLPGQEAGNVPFVTEGGFGEYSNKPGQIASTVADWIAHPDQLSEMQHAAKEAGRPSATYDIARDIA 182
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A7S1TX56_9STRA (Monogalactosyldiacylglycerol synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX56_9STRA) HSP 1 Score: 177 bits (450), Expect = 4.280e-47 Identity = 95/170 (55.88%), Postives = 114/170 (67.06%), Query Frame = 1
Query: 1 GGDGVGKLQDIATKVADRLATDHH-PGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALGRPRASLDIARSIVSNLMP 507
GGDGVG++ IAT++A L D P Q+ V+CG NE+++ LE WPE V V + GFV NMDEWM ASD +VTKAGPGTIAEAC GLP++LS+FLPGQEAGNVP+V + FG Y RP IA VS L D +KLEEM + GRP A+ IAR I S L P
Sbjct: 248 GGDGVGRIGKIATELAMELGADGGGPAQMAVICGKNEELKAQLEAQKWPEN---VHVSVQGFVRNMDEWMGASDCIVTKAGPGTIAEACASGLPIMLSAFLPGQEAGNVPFVVKGGFGAYNTRPKVIAKTVSGWLKDPKKLEEMSRKSLNAGRPEATKAIARDIGSLLYP 414
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A6H5K8U7_9PHAE (Monogalactosyldiacylglycerol synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8U7_9PHAE) HSP 1 Score: 171 bits (432), Expect = 6.100e-44 Identity = 92/163 (56.44%), Postives = 109/163 (66.87%), Query Frame = 1
Query: 1 GGDGVGKLQDIATKVADRLATDHHPGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALGRPRASLDIARSI 489
GGDGVG LQ IA V +L D QVVVVCGTN +++ +LE SW S V + + GFVSNMDEWM A D +VTKAGPGTIAEA RGLP++LS+FLPGQEAGNVP+VTE FG + + PA IA VS L D L EM + AR RP+A+ I I
Sbjct: 293 GGDGVGGLQGIADSVGHKLGEDKAETQVVVVCGTNNEVKTSLEKGSW---ASNVHMHVKGFVSNMDEWMGAVDCIVTKAGPGTIAEAMIRGLPIMLSAFLPGQEAGNVPFVTEGGFGSFSKDPAKIADTVSRWLRDDALLAEMSSKAREASRPQATYKICSDI 452
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A6U2C4A3_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2C4A3_HEMAN) HSP 1 Score: 160 bits (405), Expect = 1.560e-43 Identity = 86/162 (53.09%), Postives = 107/162 (66.05%), Query Frame = 1
Query: 13 VGKLQDIATKVADRLATDHHPGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALG--RPRASLDIARSIV 492
VG L+ +A V +RL QVVVVCG NEK++ ALE WP+ V+VK+LGFV+NMD++M A+D LVTKAGPGTIAEA GLP +LS FLPGQEAGN+PYVT+N FG + + P +A V L +KL EM A +G RA+ DIAR I
Sbjct: 1 VGGLEKVAANVGERLKEFDGKAQVVVVCGKNEKVKAALEERPWPDN---VSVKVLGFVTNMDDYMVAADCLVTKAGPGTIAEASITGLPTMLSGFLPGQEAGNIPYVTQNGFGGFEKDPRKLADCVKTWLGQPDKLAEMSERASRVGMVHARATKDIAREIA 159
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A7S0VI56_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VI56_9CRYP) HSP 1 Score: 160 bits (404), Expect = 1.930e-43 Identity = 82/155 (52.90%), Postives = 105/155 (67.74%), Query Frame = 1
Query: 1 GGDGVGKLQDIATKVADRLATDHHPGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALGRPRA 465
GGDGVG L+ IA V D+L QVVVVCG NEK++ AL + +WPE V+V++LGFV+NMD++M A+D LVTKAGPGTIAEA GLP +LS FLPGQEAGN+PYVTEN FG + + P + V + L ++L M A +G+ A
Sbjct: 6 GGDGVGGLERIAANVGDKLGGFEGKAQVVVVCGKNEKVKAALASRAWPEN---VSVRVLGFVTNMDDYMVAADCLVTKAGPGTIAEASITGLPTMLSGFLPGQEAGNIPYVTENGFGGFEKDPKRLGERVKEWLGQPDELAAMSERAGRVGQVHA 157
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A8J2WFQ1_9STRA (Monogalactosyldiacylglycerol synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WFQ1_9STRA) HSP 1 Score: 168 bits (425), Expect = 4.460e-43 Identity = 88/170 (51.76%), Postives = 109/170 (64.12%), Query Frame = 1
Query: 1 GGDGVGKLQDIATKVADRLATDHHPGQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALGRPRASLDIARSIVSNLMPG 510
GGDGVG + +AT + D L P +VVVCG N ++++ LE WP+ V ILGFV NMDEWMAASD +VTKAGPGTIAEA TRGLP +LSS LPGQEAGNV +V EN FG + ++PA I ++ +D E + + A RP A+LDIAR I L G
Sbjct: 294 GGDGVGGIAKVATALGDALGEAKDPSGLVVVCGKNAQVKKELEERQWPDN---VKPTILGFVDNMDEWMAASDCIVTKAGPGTIAEAATRGLPCLLSSHLPGQEAGNVKFVVENGFGAFVKKPAKIGETIAKWFSDLNLRERLSSKALEAARPSATLDIARDIGGLLFEG 460
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Match: A0A7S1XF87_9RHOD (Monogalactosyldiacylglycerol synthase n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XF87_9RHOD) HSP 1 Score: 166 bits (419), Expect = 1.180e-42 Identity = 88/165 (53.33%), Postives = 112/165 (67.88%), Query Frame = 1
Query: 1 GGDGVGKLQDIATKVADRLATDHHP--GQVVVVCGTNEKIREALENYSWPEKGSGVTVKILGFVSNMDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENKFGLYRQRPADIAHEVSDLLADREKLEEMGAHARALGRPRASLDIARSI 489
GGDGVG + +A VA RL QVVV+CG NE ++ L +P V V++ G+V+NM EWMAA D +VTKAGPGTIAEA RGLP+ILS++LPGQE GNVP+VT+ G + + PA+IA V+ +D KL+EM ARA+GRPRA+ DIARSI
Sbjct: 232 GGDGVGGVGPVARAVAKRLGASEKSMKSQVVVICGKNENLKRELLATDFP-----VPVRVEGYVNNMSEWMAACDTIVTKAGPGTIAEALIRGLPIILSAYLPGQETGNVPFVTDAGVGSFSRDPAEIAETVASWFSDETKLQEMSKKARAMGRPRATYDIARSI 391 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3882.10133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3882.10133.1 >prot_H-paniculata_contig3882.10133.1 ID=prot_H-paniculata_contig3882.10133.1|Name=mRNA_H-paniculata_contig3882.10133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp MDEWMAASDLLVTKAGPGTIAEACTRGLPVILSSFLPGQEAGNVPYVTENback to top mRNA from alignment at H-paniculata_contig3882:1346..4567- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3882.10133.1 ID=mRNA_H-paniculata_contig3882.10133.1|Name=mRNA_H-paniculata_contig3882.10133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3222bp|location=Sequence derived from alignment at H-paniculata_contig3882:1346..4567- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3882:1346..4567- >mRNA_H-paniculata_contig3882.10133.1 ID=mRNA_H-paniculata_contig3882.10133.1|Name=mRNA_H-paniculata_contig3882.10133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=756bp|location=Sequence derived from alignment at H-paniculata_contig3882:1346..4567- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |