prot_H-paniculata_contig3881.10132.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3881.10132.1
Unique Nameprot_H-paniculata_contig3881.10132.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length837
Homology
BLAST of mRNA_H-paniculata_contig3881.10132.1 vs. uniprot
Match: D7FSX8_ECTSI (Ubiquitin carboxyl-terminal hydrolase 64E n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX8_ECTSI)

HSP 1 Score: 385 bits (988), Expect = 4.500e-111
Identity = 303/656 (46.19%), Postives = 363/656 (55.34%), Query Frame = 0
Query:  180 SGSKEASAVAGMGN-DGLAGGI---WSIVNEEKVELADSDDEVPLPDGMPAFRDLEDAMLVRDLKKDRLPGRIIRGRDGSGKTAGGLFVAQPISELRLASSSALVLCLRPRLPQAPLDPASEQEARXXXXXXXXXXEMLENGQARPEGGEQVDKARGIAAEGGATKEGWEKLDMARRTLEALEANLADLVMKREHREDVLESAFKNCEKVARNAKNLEHENSVRAWEKQIKAEREAIHETRQREENPLEAEVKAMRRSMEREKQRLTKLELEKDSVQQQXXXQLAKQNDKSAVPA-ETDTLFTRVRGVMFSAAKATLEFVRGTDTEASKDEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKEWGT---LSSAPKSGKGSKGGSKKFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI--------------------TAANAARASNDEIESRRTDPTTDLHLWTFLRRNPLGDRGQLPSDEPTWPGPLKEVIVENTSQPTLENLNDALGKAYGLPASRVWAIKNNWLKHEWVRLTPEMGLKKVKKKSNKKKGVGGDGRRQVTNIRDAPYSLKDGDVVAVVDKEEDPEGQADLTRAEDEAYREQGTALPQTSGGPKRRRXKKTLANRAATEIGLTLGGAD 807
            S S   SA AG G  D LA  I   W  V E K E ADSDDE+PLP+GMP F+ LE+AMLVR+L+KDRLPG+IIR  D  G TAGGLFV Q ISEL L SS ALVLCLRPRLPQ PL   +    R          E+LENGQA        D                               NL D+  KR+     LE  +    K ++N ++ E + S++AW+K++ A +E I  T  +EE PL+ EVK+M+ ++E       K E E+D              +K+A    E+ ++FTRV+GV+FS AKAT  F R  DT                                                   +WG      +A  SGK  KGG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     T A+  R   DE+E RRTDP TDLHLWTF R+NPLGD G LP DEP WPGPLKEVIVE+ SQPTL+NL++ALGKAYG+PA+RV AIK+NW KH+WVRLT EMG+KK+KK        G  G+R VTN+R+APYS KDGDVVAVVDK ED  G+ADL RA+DEAYRE G    +T        X    + RA  E+GLTLGG D
Sbjct: 1860 SSSANCSAAAGEGGGDKLAASIDREW--VKEVKEERADSDDEIPLPEGMPGFQTLEEAMLVRELRKDRLPGKIIRSSDVGGNTAGGLFVGQTISELNLCSSVALVLCLRPRLPQTPLVQEASMSRREKLAE-----ELLENGQANG------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLEDMQKKRDVDIRALELGWTTYNKASKNNRSPEQDRSMKAWKKELNARKERIDNTHLKEERPLDKEVKSMKTAVEXXXXXXXKTEKEED-------------REKAAAQGLESASIFTRVKGVLFSGAKATFGFGRTDDTPDDN---------------AGIAIAAAQLKSNREQESIAMEKETDKELEASDWGVPKARGNANSSGK--KGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAMASPETTLADLLRKREDEVERRRTDPVTDLHLWTFWRKNPLGDGGTLPIDEPEWPGPLKEVIVEDVSQPTLDNLHEALGKAYGIPATRVRAIKHNWGKHQWVRLTREMGIKKMKK--------GKKGKRLVTNLREAPYSFKDGDVVAVVDKMEDESGEADLARADDEAYREHGKGQAKTKKXXXXXXXXXPASKRAVPEVGLTLGGGD 2464          
BLAST of mRNA_H-paniculata_contig3881.10132.1 vs. uniprot
Match: A0A6H5JDC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDC1_9PHAE)

HSP 1 Score: 362 bits (929), Expect = 1.680e-105
Identity = 300/647 (46.37%), Postives = 365/647 (56.41%), Query Frame = 0
Query:  180 SGSKEASAVAGMGN-DGLAGGI-WSIVNEEKVELADSDDEVPLPDGMPAFRDLEDAMLVRDLKKDRLPGRIIRGRDGSGKTAGGLFVAQPISELRLASSSALVLCLRPRLPQAPLDPASEQEARXXXXXXXXXXEMLENGQARPEGGEQVDKARGIAAEGGATKEGWEKLDMARRTLEALEANLADLVMKREHREDVLESAFKNCEKVARNAKNLEHENSVRAWEKQIKAEREAIHETRQREENPLEAEVKAMRRSMEREKQRLTKLELEKDSVQQQXXXQLAKQNDKSAVPA-ETDTLFTRVRGVMFSAAKATLEFVRGTDT--------------EASKDEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKEWGTLSSAPKSGKGSKGGSKKFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITAANAARASNDEIESRRTDPTTDLHLWTFLRRNPLGDRGQLPSDEPTWPGPLKEVIVENTSQPTLENLNDALGKAYGLPASRVWAIKNNWLKHEWVRLTPEMGLKKVKKKSNKKKGVGGDGRRQVTNIRDAPYSLKDGDVVAVVDKEEDPEGQADLTRAEDEA----YREQGTALPQTSGGPKRRRXKKTLANRAATEIGLTLGG 805
            S S   SA AG G  D  A  I    V E K E ADSDDE+PLP+GMP F+ LE+AMLVR+L+KDRLPG+IIR  D  G TAGGLFV Q ISEL L SS ALVLCLRPRLPQ PL   +    R          E+LENGQA  + G                                   NL D+  KR+     L+  +    K  +N ++ E +  ++ W+K++ A +E I     +EE PL+ EVK+M+ ++E+ K+ + K E E+D              +K+A    E+ ++FTRV+GV+FS AKAT  F R  D               ++++++E                          XXXXXXXXXXXXXXXX                         XXXXXXXXXXXXXXXXXXXXXXXXX      T A+  R   DE+E RRTDP TDLHLWTF R+NPLGD G LP DEP WPGPLKEVIVEN SQPTL+NL++ALGKAYG+PASRV AIK+NW KH+WVRLT EMG+KK+KK        G  G+R VTN+R+APYS KDGDVVAVVDK ED  G+ADL RA+DEA    YRE G              X    + RA  E+GLTLGG
Sbjct:  608 SSSANCSAAAGQGEGDKSAASIDRQGVEEVKEEHADSDDEIPLPEGMPGFQTLEEAMLVRELRKDRLPGKIIRSSDVGGNTAGGLFVGQTISELNLCSSVALVLCLRPRLPQTPLVQEASMSRREKLAE-----ELLENGQANGDHGTXXXXXXXXXXXX------XXXXXXXXXXXXXXXXNLEDMQKKRDVDIRALDLGWTTYSKALKNTRSPEQDRLMKTWKKELNARKERIDNAHLKEERPLDKEVKSMKTAVEKMKRSIKKTEKEED-------------REKAAAQGLESASIFTRVKGVLFSGAKATFGFGRTDDAPDDNASIAIAAAQLKSNREQESIAMEKEMDKELEASDWGVPKARGNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXMASPETTLADLLRKREDEVERRRTDPVTDLHLWTFCRKNPLGDGGTLPIDEPEWPGPLKEVIVENVSQPTLDNLHEALGKAYGIPASRVRAIKHNWGKHQWVRLTREMGIKKMKK--------GKKGKRLVTNLREAPYSFKDGDVVAVVDKMEDESGEADLARADDEASASAYREHGKXXXXXXXXXXXX-XXXPASKRAMPEVGLTLGG 1213          
BLAST of mRNA_H-paniculata_contig3881.10132.1 vs. uniprot
Match: A0A7S3UXB8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXB8_HETAK)

HSP 1 Score: 62.4 bits (150), Expect = 3.270e-7
Identity = 51/161 (31.68%), Postives = 74/161 (45.96%), Query Frame = 0
Query:  610 ARASNDEIESRRTDPTTDLHLWTFLRRNPLG----DRGQLPSDEPTWPGPLKEVIVENTSQPTLENLNDALGKAYGLPASRVWAIKNNWLKHEWVRLTPEMGL--KKVKKKSNKKKGVGGDGRRQVTNIRDAPYSLKDGDVVAVVDKEEDPEGQADLTRAE 764
            A+     +  RRT P   + LW   R  PLG    D+ Q    +P WP   KEVI+   +QP L +LN  L  ++G+    V   ++     EW+ LT  + L  KK                 Q  NI+DAP+S+K G+ + VVDK E P+ +  +   E
Sbjct:   45 AQIDEPVVAERRTAPGA-ISLWV-QRARPLGADAEDQAQKLDLQPEWPP--KEVILIAGTQPNLGHLNRFLASSFGIENDNVLVSRHCLESFEWINLTSALTLTTKKGXXXXXXXXXXXKSKSPQPRNIKDAPFSVKSGEHLLVVDKSEFPDSKTIVLETE 201          
BLAST of mRNA_H-paniculata_contig3881.10132.1 vs. uniprot
Match: A0A2G8KR90_STIJA (Putative ubiquitin carboxyl-terminal hydrolase 40-like n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KR90_STIJA)

HSP 1 Score: 63.9 bits (154), Expect = 1.340e-6
Identity = 38/112 (33.93%), Postives = 60/112 (53.57%), Query Frame = 0
Query:  655 PLKEVIVENTSQPTLENLNDALGKAYGLPASRVWAIKNNWLKHEWVRLTPEMGLKKVKKKSNKKKGVGGDGRRQVTNIRDAPYSLKDGDVVAVVDKEEDPEGQADLTRAEDE 766
            P+++ + + T  P+ E+L  AL     +P  R+   K    K++W+ +     + +  KK  KK      G+ +V N++  PYSL+DGDV+AV D E DP  Q D T  ED+
Sbjct: 1112 PVEDFVWDTTGGPSPEDLKQALSIGTSIPVDRLLLAKKLPDKYDWLIILSSAVMGERGKKGKKK------GKPKVFNLKQGPYSLRDGDVIAVKDLEFDPLNQDDFTTEEDD 1217          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3881.10132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FSX8_ECTSI4.500e-11146.19Ubiquitin carboxyl-terminal hydrolase 64E n=1 Tax=... [more]
A0A6H5JDC1_9PHAE1.680e-10546.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3UXB8_HETAK3.270e-731.68Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2G8KR90_STIJA1.340e-633.93Putative ubiquitin carboxyl-terminal hydrolase 40-... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 531..551
NoneNo IPR availableCOILSCoilCoilcoord: 375..418
NoneNo IPR availableCOILSCoilCoilcoord: 427..461
NoneNo IPR availableCOILSCoilCoilcoord: 347..367
NoneNo IPR availablePANTHERPTHR31780FAMILY NOT NAMEDcoord: 56..463
coord: 541..833

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3881contigH-paniculata_contig3881:4791..15063 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3881.10132.1mRNA_H-paniculata_contig3881.10132.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3881 3331..15086 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3881.10132.1 ID=prot_H-paniculata_contig3881.10132.1|Name=mRNA_H-paniculata_contig3881.10132.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=837bp
MCLRNLGRIYLDERKSLTELRATLKNHLEKALSKAAKQVAQEAAARAAEQ
ATAAAAAADITAVAESAAERASADKEEDVMREEEIENIRQSIKTKSANKP
RKKRNAARAAAAAAAAAAAAATIAEAEPESTATQGSPQGDGDPCQPDPWS
SSAPNGHSGLAPFHEATNGGQKGLRSRDSSGSKEASAVAGMGNDGLAGGI
WSIVNEEKVELADSDDEVPLPDGMPAFRDLEDAMLVRDLKKDRLPGRIIR
GRDGSGKTAGGLFVAQPISELRLASSSALVLCLRPRLPQAPLDPASEQEA
REREGRERLAKEMLENGQARPEGGEQVDKARGIAAEGGATKEGWEKLDMA
RRTLEALEANLADLVMKREHREDVLESAFKNCEKVARNAKNLEHENSVRA
WEKQIKAEREAIHETRQREENPLEAEVKAMRRSMEREKQRLTKLELEKDS
VQQQQQQQLAKQNDKSAVPAETDTLFTRVRGVMFSAAKATLEFVRGTDTE
ASKDEEREAEALPLDDGGQGKTDSSDSVSFAKDHEREKDKHKNSDEDKKK
EWGTLSSAPKSGKGSKGGSKKFNSSNNSNSNNNNANNSSGGAVTTGGSEK
SSAITAANAARASNDEIESRRTDPTTDLHLWTFLRRNPLGDRGQLPSDEP
TWPGPLKEVIVENTSQPTLENLNDALGKAYGLPASRVWAIKNNWLKHEWV
RLTPEMGLKKVKKKSNKKKGVGGDGRRQVTNIRDAPYSLKDGDVVAVVDK
EEDPEGQADLTRAEDEAYREQGTALPQTSGGPKRRRKKKTLANRAATEIG
LTLGGADDGSSDEDDDEDDDDDDDDDDDDDLTDIAR*
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