prot_H-paniculata_contig38712.10113.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig38712.10113.1
Unique Nameprot_H-paniculata_contig38712.10113.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length56
Homology
BLAST of mRNA_H-paniculata_contig38712.10113.1 vs. uniprot
Match: D8LDU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU9_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 3.810e-27
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0
Query:    1 QDVRELSRIHWKVLVVDEAHRLKNCDSKLFQELGSLPRDHSLLLTGTPLQNRTEEV 56
            +DVRELSRIHWKVLVVDEAHRLKNC SKLFQELGSLPRDHSLLLTGTPLQNRTEE+
Sbjct:  808 KDVRELSRIHWKVLVVDEAHRLKNCGSKLFQELGSLPRDHSLLLTGTPLQNRTEEL 863          
BLAST of mRNA_H-paniculata_contig38712.10113.1 vs. uniprot
Match: A0A6H5KVU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU7_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 3.810e-27
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0
Query:    1 QDVRELSRIHWKVLVVDEAHRLKNCDSKLFQELGSLPRDHSLLLTGTPLQNRTEEV 56
            +DVRELSRIHWKVLVVDEAHRLKNC SKLFQELGSLPRDHSLLLTGTPLQNRTEE+
Sbjct:  763 KDVRELSRIHWKVLVVDEAHRLKNCGSKLFQELGSLPRDHSLLLTGTPLQNRTEEL 818          
BLAST of mRNA_H-paniculata_contig38712.10113.1 vs. uniprot
Match: A0A835Z670_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z670_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.980e-22
Identity = 44/56 (78.57%), Postives = 53/56 (94.64%), Query Frame = 0
Query:    1 QDVRELSRIHWKVLVVDEAHRLKNCDSKLFQELGSLPRDHSLLLTGTPLQNRTEEV 56
            ++VR+LSR+ W+VLVVDEAHRLKNC+SKLFQEL SLPR+H LLLTGTPLQN+TEE+
Sbjct:  161 REVRDLSRVAWQVLVVDEAHRLKNCESKLFQELSSLPREHCLLLTGTPLQNKTEEL 216          
BLAST of mRNA_H-paniculata_contig38712.10113.1 vs. uniprot
Match: A0A4D9D793_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D793_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.350e-18
Identity = 41/56 (73.21%), Postives = 49/56 (87.50%), Query Frame = 0
Query:    1 QDVRELSRIHWKVLVVDEAHRLKNCDSKLFQELGSLPRDHSLLLTGTPLQNRTEEV 56
            +D++ LSRI WKVLVVDEAHRLKN  S+LF EL +LPRDH +LLTGTPLQN+TEE+
Sbjct: 1008 KDIKILSRIMWKVLVVDEAHRLKNPASRLFMELRTLPRDHCVLLTGTPLQNKTEEL 1063          
BLAST of mRNA_H-paniculata_contig38712.10113.1 vs. uniprot
Match: W7U0D9_9STRA (Myb domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0D9_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.530e-17
Identity = 40/56 (71.43%), Postives = 49/56 (87.50%), Query Frame = 0
Query:    1 QDVRELSRIHWKVLVVDEAHRLKNCDSKLFQELGSLPRDHSLLLTGTPLQNRTEEV 56
            +D++ LSRI WKVLVVDEAHRLKN  S+LF EL +LPR+H +LLTGTPLQN+TEE+
Sbjct:   97 KDIKILSRIMWKVLVVDEAHRLKNPASRLFVELRTLPREHCVLLTGTPLQNKTEEL 152          
BLAST of mRNA_H-paniculata_contig38712.10113.1 vs. uniprot
Match: A0A7S4ENJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ENJ2_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.640e-17
Identity = 37/56 (66.07%), Postives = 45/56 (80.36%), Query Frame = 0
Query:    1 QDVRELSRIHWKVLVVDEAHRLKNCDSKLFQELGSLPRDHSLLLTGTPLQNRTEEV 56
            +DV   ++I WK L+VDEAHRLKN  SKLF+EL S+PRD+ LLLTGTPL N TEE+
Sbjct:   60 KDVDVFTKIKWKALIVDEAHRLKNSSSKLFEELTSVPRDYCLLLTGTPLANATEEL 115          
BLAST of mRNA_H-paniculata_contig38712.10113.1 vs. uniprot
Match: A0A7S2K2V5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K2V5_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 9.010e-17
Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    1 QDVRELSRIHWKVLVVDEAHRLKNCDSKLFQELGSLPRDHSLLLTGTPLQNRTEEV 56
            +D+  LSRI W+ LVVDEAHRLKN  S+LF +LG++PRD  LLLTGTPLQN TEE+
Sbjct:   65 KDINVLSRIRWRALVVDEAHRLKNKKSRLFADLGTVPRDFCLLLTGTPLQNSTEEL 120          
BLAST of mRNA_H-paniculata_contig38712.10113.1 vs. uniprot
Match: A0A7S1B9C3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9C3_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 9.920e-17
Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    1 QDVRELSRIHWKVLVVDEAHRLKNCDSKLFQELGSLPRDHSLLLTGTPLQNRTEEV 56
            +D+  LS+I WK L+VDEAHRLKN  S+LF+EL S+PRD  LLLTGTPLQN TEE+
Sbjct:  222 KDIHVLSKITWKALIVDEAHRLKNTQSRLFRELNSVPRDWCLLLTGTPLQNSTEEL 277          
BLAST of mRNA_H-paniculata_contig38712.10113.1 vs. uniprot
Match: B8CAT3_THAPS (Chromodomain-helicase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAT3_THAPS)

HSP 1 Score: 80.5 bits (197), Expect = 2.520e-16
Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    1 QDVRELSRIHWKVLVVDEAHRLKNCDSKLFQELGSLPRDHSLLLTGTPLQNRTEEV 56
            +DV  LS+I WK L+VDEAHRLKN  ++LF++L S+PRD  LLLTGTPLQN TEE+
Sbjct:  395 KDVNVLSKIKWKALIVDEAHRLKNIKARLFEDLASVPRDFCLLLTGTPLQNSTEEL 450          
BLAST of mRNA_H-paniculata_contig38712.10113.1 vs. uniprot
Match: A0A2P4YLW4_9STRA (Chromodomain-helicase-DNA-binding protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YLW4_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 4.690e-16
Identity = 36/56 (64.29%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    1 QDVRELSRIHWKVLVVDEAHRLKNCDSKLFQELGSLPRDHSLLLTGTPLQNRTEEV 56
            +D+  LS+IHW+ LVVDEAHRLKN  S+L +++ SL RDH +LLTGTPLQN+TEE+
Sbjct:  548 KDIAVLSKIHWRCLVVDEAHRLKNQSSRLVEQMRSLRRDHCVLLTGTPLQNKTEEL 603          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38712.10113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDU9_ECTSI3.810e-2794.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVU7_9PHAE3.810e-2794.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z670_9STRA2.980e-2278.57SNF2 family N-terminal domain-containing protein n... [more]
A0A4D9D793_9STRA2.350e-1873.21Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U0D9_9STRA1.530e-1771.43Myb domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A7S4ENJ2_9STRA3.640e-1766.07Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A7S2K2V5_9STRA9.010e-1767.86Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S1B9C3_9STRA9.920e-1767.86Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
B8CAT3_THAPS2.520e-1666.07Chromodomain-helicase (Fragment) n=1 Tax=Thalassio... [more]
A0A2P4YLW4_9STRA4.690e-1664.29Chromodomain-helicase-DNA-binding protein (Fragmen... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 4..56
e-value: 7.6E-14
score: 51.2
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..56
e-value: 1.1E-19
score: 72.2
NoneNo IPR availablePANTHERPTHR45623FAMILY NOT NAMEDcoord: 1..55
NoneNo IPR availablePANTHERPTHR45623:SF11KISMET, ISOFORM Ccoord: 1..55
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..56
score: 12.238
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig38712contigH-paniculata_contig38712:349..516 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig38712.10113.1mRNA_H-paniculata_contig38712.10113.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig38712 349..516 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig38712.10113.1 ID=prot_H-paniculata_contig38712.10113.1|Name=mRNA_H-paniculata_contig38712.10113.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=56bp
QDVRELSRIHWKVLVVDEAHRLKNCDSKLFQELGSLPRDHSLLLTGTPLQ
NRTEEV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR038718SNF2-like_sf
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase