mRNA_H-paniculata_contig38369.10050.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig38369.10050.1 vs. uniprot
Match: A0A4Y9YHS6_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9YHS6_9AGAM) HSP 1 Score: 78.6 bits (192), Expect = 3.070e-15 Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 4 GNTILFEDNKSAMNLSKGSGAHCRTRHIGVRWHGIREWIREGILALKYVQTGDQLADILTKGLRRVKFQ 210
G TIL DN+SAM +++ H RT+HI VR H +RE + EGIL L+YV TG+Q+AD+LTKGL R K +
Sbjct: 1348 GPTILLMDNQSAMAIARNPAFHARTKHIDVRHHFLREKVEEGILDLEYVPTGEQVADVLTKGLPREKHE 1416
BLAST of mRNA_H-paniculata_contig38369.10050.1 vs. uniprot
Match: A0A1X1QSA8_9GAMM (Uncharacterized protein n=1 Tax=Cycloclasticus sp. symbiont of Poecilosclerida sp. M TaxID=1840537 RepID=A0A1X1QSA8_9GAMM) HSP 1 Score: 73.6 bits (179), Expect = 3.190e-15 Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 10 TILFEDNKSAMNLSKGSGAHCRTRHIGVRWHGIREWIREGILALKYVQTGDQLADILTKGLRRVKFQRL 216
TI+ EDN+SAM+L+K H R +HI +R H +R+ + +G + L Y +T D +ADILTKGL V F+RL
Sbjct: 24 TIIHEDNQSAMSLAKNPQFHGRAKHIDIRHHFVRDKVSDGTIELNYCRTDDMVADILTKGLCNVSFERL 92
BLAST of mRNA_H-paniculata_contig38369.10050.1 vs. uniprot
Match: UPI001E1CA6F9 (LOW QUALITY PROTEIN: uncharacterized protein LOC109774810 n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI001E1CA6F9) HSP 1 Score: 77.0 bits (188), Expect = 1.070e-14 Identity = 38/69 (55.07%), Postives = 49/69 (71.01%), Query Frame = 1
Query: 10 TILFEDNKSAMNLSKGSGAHCRTRHIGVRWHGIREWIREGILALKYVQTGDQLADILTKGLRRVKFQRL 216
T L DNKSA+ L K H RT+HI R+H IRE +++G +A+ Y+ TG+QLADI+TK L RVKFQ L
Sbjct: 1352 TPLLIDNKSAIQLCKNPVFHDRTKHIETRFHFIRECVQDGRIAVDYIHTGEQLADIMTKALPRVKFQEL 1420
BLAST of mRNA_H-paniculata_contig38369.10050.1 vs. uniprot
Match: A0A453SJJ3_AEGTS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453SJJ3_AEGTS) HSP 1 Score: 75.5 bits (184), Expect = 2.240e-14 Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 10 TILFEDNKSAMNLSKGSGAHCRTRHIGVRWHGIREWIREGILALKYVQTGDQLADILTKGLRRVKFQRL 216
T L DNKSA+ L K H RT+HI R+H IRE +++G + + Y+ TG+QLADI+TK L RVKFQ L
Sbjct: 251 TPLLIDNKSAIQLCKNPVFHDRTKHIETRFHFIRECVQDGRIVVDYIHTGEQLADIMTKALPRVKFQEL 319
BLAST of mRNA_H-paniculata_contig38369.10050.1 vs. uniprot
Match: A0A4Y9XMG5_9AGAM (Uncharacterized protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9XMG5_9AGAM) HSP 1 Score: 72.0 bits (175), Expect = 2.320e-14 Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 4 GNTILFEDNKSAMNLSKGSGAHCRTRHIGVRWHGIREWIREGILALKYVQTGDQLADILTKGLRRVK 204
G TIL DN+SAM ++ H R +HI VR H + E ++EGIL L+Y+ TG+Q+AD+LTKGL R K
Sbjct: 52 GPTILLMDNQSAMVIAWNPAFHARMKHIDVRHHFLHEKVKEGILDLEYIPTGEQVADVLTKGLPREK 118
BLAST of mRNA_H-paniculata_contig38369.10050.1 vs. uniprot
Match: A0A1X7SFX4_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SFX4_AMPQE) HSP 1 Score: 73.2 bits (178), Expect = 3.300e-14 Identity = 34/74 (45.95%), Postives = 51/74 (68.92%), Query Frame = 1
Query: 4 GNTILFEDNKSAMNLSKGSGAHCRTRHIGVRWHGIREWIREGILALKYVQTGDQLADILTKGLRRVKFQRLINL 225
G T +FEDN+SA++++K H R +HIG+++H IRE + + +KY +T D +ADI TKGL KF+RL +L
Sbjct: 103 GPTTIFEDNQSAISMAKNPQFHGRAKHIGIKYHFIREQVSTESVQIKYCRTEDMVADIFTKGLTHEKFERLRSL 176
BLAST of mRNA_H-paniculata_contig38369.10050.1 vs. uniprot
Match: UPI001AE8F203 (secreted RxLR effector protein 161-like n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AE8F203) HSP 1 Score: 73.9 bits (180), Expect = 4.290e-14 Identity = 33/72 (45.83%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 10 TILFEDNKSAMNLSKGSGAHCRTRHIGVRWHGIREWIREGILALKYVQTGDQLADILTKGLRRVKFQRLINL 225
T++FEDN+S ++L+K H R +HI +R+H RE + + L Y Q+ D +AD+LTKGL +VKF +L+NL
Sbjct: 179 TVIFEDNQSTISLTKNPQYHGRAKHIDIRYHFTRELVEANKITLVYCQSEDMVADMLTKGLSKVKFVKLLNL 250
BLAST of mRNA_H-paniculata_contig38369.10050.1 vs. uniprot
Match: A0A2K3K827_TRIPR (Gag-pol polyprotein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3K827_TRIPR) HSP 1 Score: 69.7 bits (169), Expect = 6.450e-14 Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 16 LFEDNKSAMNLSKGSGAHCRTRHIGVRWHGIREWIREGILALKYVQTGDQLADILTKGLRRVKFQRL 216
L+ DN SA+N+SK H RT+HI +R H IR+ + EG++ L+++ T +QLADI TK L V+F++L
Sbjct: 11 LYCDNLSAINISKNPIQHSRTKHIDIRHHFIRDLVEEGVVKLEHIATEEQLADIFTKALDAVQFEKL 77
BLAST of mRNA_H-paniculata_contig38369.10050.1 vs. uniprot
Match: A0A453LP72_AEGTS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453LP72_AEGTS) HSP 1 Score: 74.3 bits (181), Expect = 9.170e-14 Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 1
Query: 25 DNKSAMNLSKGSGAHCRTRHIGVRWHGIREWIREGILALKYVQTGDQLADILTKGLRRVKFQRL 216
DNKSA+ L K S H R++HI VR+H IRE + EG + +++V+TGDQLADILTK L RVKF L
Sbjct: 468 DNKSAIALCKNSVHHDRSKHIDVRYHFIRECVEEGRVTVEHVRTGDQLADILTKPLARVKFLEL 531
BLAST of mRNA_H-paniculata_contig38369.10050.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM) HSP 1 Score: 74.3 bits (181), Expect = 9.430e-14 Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 10 TILFEDNKSAMNLSKGSGAHCRTRHIGVRWHGIREWIREGILALKYVQTGDQLADILTKGLRRVKFQR 213
T+L DN+SAM +++ H RT+HI VR+H +RE + G + L+YV TGDQ+AD+LTKGL + K +
Sbjct: 1060 TLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTKGLVKAKHDK 1127 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38369.10050.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig38369.10050.1 >prot_H-paniculata_contig38369.10050.1 ID=prot_H-paniculata_contig38369.10050.1|Name=mRNA_H-paniculata_contig38369.10050.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=78bp RGNTILFEDNKSAMNLSKGSGAHCRTRHIGVRWHGIREWIREGILALKYVback to top mRNA from alignment at H-paniculata_contig38369:1527..1760- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig38369.10050.1 ID=mRNA_H-paniculata_contig38369.10050.1|Name=mRNA_H-paniculata_contig38369.10050.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=234bp|location=Sequence derived from alignment at H-paniculata_contig38369:1527..1760- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig38369:1527..1760- >mRNA_H-paniculata_contig38369.10050.1 ID=mRNA_H-paniculata_contig38369.10050.1|Name=mRNA_H-paniculata_contig38369.10050.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=468bp|location=Sequence derived from alignment at H-paniculata_contig38369:1527..1760- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |