prot_H-paniculata_contig11565.1002.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11565.1002.1
Unique Nameprot_H-paniculata_contig11565.1002.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length131
Homology
BLAST of mRNA_H-paniculata_contig11565.1002.1 vs. uniprot
Match: D8LST7_ECTSI (Putative type II topoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LST7_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 1.310e-61
Identity = 99/133 (74.44%), Postives = 110/133 (82.71%), Query Frame = 0
Query:    2 AAIVPSASLRLCDGFDIVR-KGRGRGRQLMVMPGTLGIGG--VGGKLGTLENVTTTSPVLYMEFPQGRLKCTGRTVHTKGRFFTLYADKTGSKATRMDCRDVFDSIVFFSSACWVGKREDNPKEEALPLPEDL 131
            AAI PS++LR CDG ++V+ K RGRGRQLMV+PG LG+G    GGKLGTL N T  +PVLYMEFP+GRLKCTGRTVH KGRFFTLYADK   +ATRMDCRDVFDS VFFS ACWVGK+EDNP EE LPLPE L
Sbjct:   67 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYMEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESL 199          
BLAST of mRNA_H-paniculata_contig11565.1002.1 vs. uniprot
Match: A0A6H5JPN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN3_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 2.510e-59
Identity = 96/133 (72.18%), Postives = 108/133 (81.20%), Query Frame = 0
Query:    2 AAIVPSASLRLCDGFDIVR-KGRGRGRQLMVMPGTLGIGG--VGGKLGTLENVTTTSPVLYMEFPQGRLKCTGRTVHTKGRFFTLYADKTGSKATRMDCRDVFDSIVFFSSACWVGKREDNPKEEALPLPEDL 131
            AAI PS++LR CDG ++V+ K RGRGRQLMV+PG LG+G    GGKLGTL N    +PVLY+EFP+GRLKCTGR VH KGRFFTLYADK   +ATRMDCRDVFDS VFFS ACWVGK+EDNP EE LPLPE L
Sbjct:   78 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGVLGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGRMVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESL 210          
BLAST of mRNA_H-paniculata_contig11565.1002.1 vs. uniprot
Match: A0A453TDM3_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453TDM3_AEGTS)

HSP 1 Score: 105 bits (262), Expect = 8.540e-26
Identity = 55/131 (41.98%), Postives = 82/131 (62.60%), Query Frame = 0
Query:    2 AAIVPSASLRLCDGFDIVR-KGRGRGRQLMVMPGTLGIGGVGGKLGTLENVTTTSPVLYMEFPQGRLKCTGRTVHTKGRFFTLYADKTGSKATRMDCRDVFDSIVFFSSACWVGKREDNPKEEALPLPEDL 131
            AA+ PS ++    G DIVR +G+ RGR L   PG L     GG++G L ++ T +PVLY+EFPQGR+K  G  V+ K ++ TL   ++   A  + C DVF+S++ FS + WVG +E+NP E  L  P+++
Sbjct:   45 AALPPSGAVARLQGRDIVRPRGQRRGRFLFSFPGLLAPAAAGGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRS---AKGVACEDVFESMIVFSESWWVGTKEENPDELKLEFPKEM 172          
BLAST of mRNA_H-paniculata_contig11565.1002.1 vs. uniprot
Match: A0A453TD59_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453TD59_AEGTS)

HSP 1 Score: 106 bits (264), Expect = 9.220e-26
Identity = 56/131 (42.75%), Postives = 82/131 (62.60%), Query Frame = 0
Query:    2 AAIVPSASLRLCDGFDIVR-KGRGRGRQLMVMPGTLGIGGVGGKLGTLENVTTTSPVLYMEFPQGRLKCTGRTVHTKGRFFTLYADKTGSKATRMDCRDVFDSIVFFSSACWVGKREDNPKEEALPLPEDL 131
            AA+ PS ++    G DIVR +G+ RGR L   PG L     GG++G L ++ T +PVLY+EFPQGR+K  G  V+ K ++ TL   ++   A  + C DVF+S+V FS + WVG +E+NP E  L  P+++
Sbjct:   45 AALPPSGAVARLQGRDIVRPRGQRRGRFLFSFPGLLAPAAAGGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRS---AKGVACEDVFESMVLFSESWWVGTKEENPDELKLEFPKEM 172          
BLAST of mRNA_H-paniculata_contig11565.1002.1 vs. uniprot
Match: UPI0009E3B71A (DNA-binding protein RHL1 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E3B71A)

HSP 1 Score: 107 bits (268), Expect = 2.380e-25
Identity = 55/126 (43.65%), Postives = 80/126 (63.49%), Query Frame = 0
Query:    6 PSASLRLCDGFDIVRKGRGRGRQLMVMPGTLGIGGVGGKLGTLENVTTTSPVLYMEFPQGRLKCTGRTVHTKGRFFTLYADKTGSKATRMDCRDVFDSIVFFSSACWVGKREDNPKEEALPLPEDL 131
            PS ++    G DIV++G+ + R L   PG +     GGK+G L N+ T +PVLY+EFPQGR+K  G  V+ K ++ TL   K+   A  + C DVF+S++ FS A W+GK+E+NP+E  L  P+DL
Sbjct:   45 PSKAIVKLQGRDIVKRGQRKSRYLFSFPGLIAPLS-GGKIGVLSNLATKNPVLYLEFPQGRMKLFGTHVYPKNKYLTLQPTKS---AKGVMCEDVFESLIVFSDAWWIGKKEENPEEYQLEYPKDL 166          
BLAST of mRNA_H-paniculata_contig11565.1002.1 vs. uniprot
Match: A0A2U1QE55_ARTAN (ARC6-like protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1QE55_ARTAN)

HSP 1 Score: 108 bits (271), Expect = 5.200e-25
Identity = 53/126 (42.06%), Postives = 79/126 (62.70%), Query Frame = 0
Query:    6 PSASLRLCDGFDIVRKGRGRGRQLMVMPGTLGIGGVGGKLGTLENVTTTSPVLYMEFPQGRLKCTGRTVHTKGRFFTLYADKTGSKATRMDCRDVFDSIVFFSSACWVGKREDNPKEEALPLPEDL 131
            PS ++   +G D++RK   + R L   PG +G  G GGK+G L+++ + +PVLY+EFPQGR+K  G  V+ K R+ TL   K G   T   C D FD+++ FS A W+G +E+NP+E  L  PE++
Sbjct:   54 PSKTVAKHNGRDLLRKSNRKNRFLFSFPGLIGPVGSGGKIGELKDLGSKNPVLYLEFPQGRMKLFGTIVYPKNRYLTLQFSKGGKNVT---CDDYFDNMIVFSDAWWIGTKEENPEETQLSFPENM 176          
BLAST of mRNA_H-paniculata_contig11565.1002.1 vs. uniprot
Match: A0A811S6P0_9POAL (Hypothetical protein n=2 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811S6P0_9POAL)

HSP 1 Score: 107 bits (267), Expect = 6.600e-25
Identity = 55/131 (41.98%), Postives = 80/131 (61.07%), Query Frame = 0
Query:    2 AAIVPSASLRLCDGFDIVRKGRGR-GRQLMVMPGTLGIGGVGGKLGTLENVTTTSPVLYMEFPQGRLKCTGRTVHTKGRFFTLYADKTGSKATRMDCRDVFDSIVFFSSACWVGKREDNPKEEALPLPEDL 131
            A + PS ++    G D+VR+G  R  R L   PG L     GG++G L ++ T +PVLY+EFPQGR+K  G  V+ K ++ TL   ++   A  + C DVF+S++ FS ACWVG +EDNP+E  L  P++ 
Sbjct:   41 APLAPSGAVTRLQGRDVVRRGGQRKSRYLFSFPGLLAPAASGGRIGELADLGTKNPVLYLEFPQGRMKLFGTHVYPKNKYLTLQMTRS---AKGVVCEDVFESLIVFSEACWVGTKEDNPEELKLEFPKEF 168          
BLAST of mRNA_H-paniculata_contig11565.1002.1 vs. uniprot
Match: W7TM28_9STRA (Dna-binding protein rhl1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM28_9STRA)

HSP 1 Score: 103 bits (257), Expect = 6.650e-25
Identity = 54/135 (40.00%), Postives = 83/135 (61.48%), Query Frame = 0
Query:    1 AAAIVPSA----SLRLCDGFDIVRKGRGRGRQLMVMPGTLGIGGVGGKLGTLENVTTTSPVLYMEFPQGRLKCTGRTVHTKGRFFTLYADKTGSKATRMDCRDVFDSIVFFSSACWVGKREDNPKEEALPLPEDL 131
            AA +VPS+     LR  DG DIVRKG  + R + ++P  + I   GGKLGT+  + T +PVLY++FPQGR+KC GR V  + R   L  +   S    + C+D+ +++V FS   W+G  ++NP+E+  P P+++
Sbjct:   41 AAKLVPSSIRVKDLRRWDGCDIVRKGAKKTRYVFLLPAIMTITQAGGKLGTIALMDTETPVLYLDFPQGRMKCQGRIVRPEVRLLPLAFEGKRS----VTCKDLVNTLVVFSKVWWIGTEKENPEEKPWPFPKEM 171          
BLAST of mRNA_H-paniculata_contig11565.1002.1 vs. uniprot
Match: D8RIE0_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RIE0_SELML)

HSP 1 Score: 105 bits (261), Expect = 6.930e-25
Identity = 54/128 (42.19%), Postives = 83/128 (64.84%), Query Frame = 0
Query:    4 IVPSASLRLCDGFDIVRKGRGRGRQLMVMPGTLGIGGVGGKLGTLENVTTTSPVLYMEFPQGRLKCTGRTVHTKGRFFTLYADKTGSKATRMDCRDVFDSIVFFSSACWVGKREDNPKEEALPLPEDL 131
            ++PS  L  CDG DIV+KG  + + L   PG +     GGK G L ++ T +P+LY++FP+GR+K  G  V+ K ++ TL   K GSK+  + C DV +S+V FS + W+G +E+NP+E+ L +P+DL
Sbjct:   42 LLPSKELLKCDGKDIVKKGTRKSKFLFSFPGLVAPV-AGGKFGDLAHLDTKNPILYVDFPKGRIKLFGTIVYPKNKYLTLQLTK-GSKS--VICDDVIESLVVFSESWWIGTKEENPEEKKLDMPKDL 165          
BLAST of mRNA_H-paniculata_contig11565.1002.1 vs. uniprot
Match: D8REU9_SELML (Uncharacterized protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8REU9_SELML)

HSP 1 Score: 105 bits (261), Expect = 8.460e-25
Identity = 54/128 (42.19%), Postives = 83/128 (64.84%), Query Frame = 0
Query:    4 IVPSASLRLCDGFDIVRKGRGRGRQLMVMPGTLGIGGVGGKLGTLENVTTTSPVLYMEFPQGRLKCTGRTVHTKGRFFTLYADKTGSKATRMDCRDVFDSIVFFSSACWVGKREDNPKEEALPLPEDL 131
            ++PS  L  CDG DIV+KG  + + L   PG +     GGK G L ++ T +P+LY++FP+GR+K  G  V+ K ++ TL   K GSK+  + C DV +S+V FS + W+G +E+NP+E+ L +P+DL
Sbjct:   42 LLPSKELLKCDGKDIVKKGTRKSKFLFSFPGLVAPV-AGGKFGDLAHLDTKNPILYVDFPKGRIKLFGTIVYPKNKYLTLQLTK-GSKS--VICDDVIESLVVFSESWWIGTKEENPEEKKLDMPKDL 165          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11565.1002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LST7_ECTSI1.310e-6174.44Putative type II topoisomerase n=1 Tax=Ectocarpus ... [more]
A0A6H5JPN3_9PHAE2.510e-5972.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A453TDM3_AEGTS8.540e-2641.98Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A453TD59_AEGTS9.220e-2642.75Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
UPI0009E3B71A2.380e-2543.65DNA-binding protein RHL1 n=1 Tax=Phalaenopsis eque... [more]
A0A2U1QE55_ARTAN5.200e-2542.06ARC6-like protein n=1 Tax=Artemisia annua TaxID=35... [more]
A0A811S6P0_9POAL6.600e-2541.98Hypothetical protein n=2 Tax=Miscanthus lutariorip... [more]
W7TM28_9STRA6.650e-2540.00Dna-binding protein rhl1 n=1 Tax=Nannochloropsis g... [more]
D8RIE0_SELML6.930e-2542.19Uncharacterized protein n=3 Tax=Selaginella moelle... [more]
D8REU9_SELML8.460e-2542.19Uncharacterized protein n=1 Tax=Selaginella moelle... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038859DNA-binding protein RHL1PANTHERPTHR35698FAMILY NOT NAMEDcoord: 3..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11565contigH-paniculata_contig11565:1168..2092 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11565.1002.1mRNA_H-paniculata_contig11565.1002.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11565 1168..2092 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11565.1002.1 ID=prot_H-paniculata_contig11565.1002.1|Name=mRNA_H-paniculata_contig11565.1002.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=131bp
AAAIVPSASLRLCDGFDIVRKGRGRGRQLMVMPGTLGIGGVGGKLGTLEN
VTTTSPVLYMEFPQGRLKCTGRTVHTKGRFFTLYADKTGSKATRMDCRDV
FDSIVFFSSACWVGKREDNPKEEALPLPEDL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038859RHL1