mRNA_H-paniculata_contig11564.1001.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11564.1001.1 vs. uniprot
Match: UPI001652F407 (uncharacterized protein LOC110905727 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI001652F407) HSP 1 Score: 171 bits (432), Expect = 4.860e-43 Identity = 135/421 (32.07%), Postives = 198/421 (47.03%), Query Frame = 1 Query: 1 TPQQNGVAERSWRSIFEIARASKITANMGRRYWEEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTAYIMFQSQQRRKLDDKAWAGVILGYDEDSPSCRIYNPENKSVQLSRNVRFDEEDSVTGHRGQQEHDGTRNMEDCFSTPPVTPTVTRSHAQGEQASVTET--EDW----ASASEMPPILPTHSLPATSANPFSVLSDGDYGENNGNSKMKDAEPSVEDAPSAGTAAPASGGNTTKQSR--TEAQRPXXXXXXXXXXXXXXXXXEDPGAT----------------------ARVAKAKGTGNLTEAAEK--WRATLEKEKGALVDNGVWESEDPGRLPAGRKAIRTKWIFKRKLKEDSSEARYKARLVAQGFSQVEGEDFFETSVPVARMSTFRTVFSLAAEHDF 1167 TPQQNGVAER R I EIARA + A++ ++W E + +AVY +NR P++ N TPYE G TP DH+RVFGC Y + K + + GV +GY + ++Y+ E+K V ++R+V+F EDCF P + S + + S E +DW A +E P P + P NP SD + N + P + DAP P TT+ +R T+ QR D A+ + + N +A++ WR +EKE AL DNG W E+ LP+G+KAI +KWI+K K + D + RYKARLVA+G++Q+EG D+ +T PVA++ T RT+ +LA + ++ Sbjct: 580 TPQQNGVAERKHRHILEIARAIRFEASLPVKFWGECILTAVYVINRIPSKSLNNKTPYEVLLGTTPTYDHMRVFGCLTYHWNYDTKGDKFEPRGRRGVFVGYPYGTKGYKVYDLEDKKVVITRHVKF--------------------FEDCF------PYLNDSDQKIKVTSTLEERDQDWWQGGAFFNEGPSDHPNDAGPIND-NPMGPQSDEGPAPLDENQETHTPFP-LHDAP------PEPQPVTTRSTRIRTQPQRLRDYSVQLPPSVNHVNPPPDQAASTVHPLTYYLSYDNFSSNHKAFLSAIDSCHEPKNFIQASQDPLWREAMEKEVKALQDNGTWTLEE---LPSGKKAIDSKWIYKIKHRPDGTIDRYKARLVAKGYTQMEGVDYHDTFAPVAKLVTVRTLLALAVKKNW 963
BLAST of mRNA_H-paniculata_contig11564.1001.1 vs. uniprot
Match: A0A2M4CK12_ANODA (Putative pol polyprotein (Fragment) n=1 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CK12_ANODA) HSP 1 Score: 168 bits (425), Expect = 2.690e-42 Identity = 124/391 (31.71%), Postives = 182/391 (46.55%), Query Frame = 1 Query: 1 TPQQNGVAERSWRSIFEIARASKITANMGRRYWEEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTAYIMFQSQQRRKLDDKAWAGVILGYDEDSPSCRIYNPENKSVQLSRNVRFDEEDSVTGHRGQQEHDGTRNMEDCFSTPPVTPTVTRSHAQGEQASVTETEDWASASEMPPILPTHSLPATSA---NPFSVLSDGDYGENNGNSKMKDAEPSVEDAPSAGTAAPASGGNTTKQSRTEAQRPXXXXXXXXXXXXXXXXXEDPGATARVAKAKGTGNLTEAAEKWRATLEKEKGALVDNGVWESEDPGRLPAGRKAIRTKWIFKRKLKEDSSEARYKARLVAQGFSQVEGEDFFETSVPVARMSTFRTVFSLAAEHD 1164 +PQQNGVAER RS+ E+ R A + ++YW EA+ +AVY N +PT+P N TPYE WHG PK++HLR+FGC A+ +R+KL A LGY D + R+ + + +SR+V+F E+ + R + + + TR ++ Q + +T + E P + T + P ++S+ D D EP P+ G N K E P + ++ TE+ WRA +++E AL N WE RLP GRKA+ KW +KRK E+ RYKARLVAQG+SQ G+D+ E PV R +TFRT+ +LA++ + Sbjct: 133 SPQQNGVAERKNRSLIEMVRCMLFDAQLEQKYWAEAMNTAVYLQNISPTKPRNN-TPYETWHGVKPKVNHLRIFGCDAWAHIPKAKRKKLGATAQKLTFLGYSYDHKAYRLLDKTTNEIHISRDVKFIEK-APCSERAKHDRE------------------TRHQSKKPQEIIIDT----TLKENPITIETQAEPEVQPAFEETREIVSEID----------SDTEPRRSTRPTKGIPPDRLMANVIKHQ-----------------------IEQPHTYSEAIES------TESTA-WRAAMQEEINALQGNDTWELV---RLPLGRKAVGCKWTYKRKENENGEIVRYKARLVAQGYSQKFGQDYDEVFAPVIRQATFRTILTLASKQN 456
BLAST of mRNA_H-paniculata_contig11564.1001.1 vs. uniprot
Match: A0A5N6LNQ3_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LNQ3_9ASTR) HSP 1 Score: 164 bits (414), Expect = 7.860e-41 Identity = 124/395 (31.39%), Postives = 180/395 (45.57%), Query Frame = 1 Query: 1 TPQQNGVAERSWRSIFEIARASKITANMGRRYWEEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTAYIMFQSQQRRKLDDKAWAGVILGYDEDSPSCRIYNPENKSVQLSRNVRFDEEDSVTGH-RGQQEH--DGTRNMEDCFSTPPVTPTVTRSHAQGEQASVTETEDWASASEMPPILPTHSLPATSANPFSVLSDGDYGENNGNSKMKDAEPSVEDAPSAGTAAPASGGNTTKQSRTEAQRPXXXXXXXXXXXXXXXXXEDPGATARVAKAKGTGNLTEAAEK--WRATLEKEKGALVDNGVWESEDPGRLPAGRKAIRTKWIFKRKLKEDSSEARYKARLVAQGFSQVEGEDFFETSVPVARMSTFRTVFSLAAEHDFE 1170 TP+ NGV ER R++ + R+ + +W E V +AVY LNR+PT+ TP E+W G P + HLR+FG AY + Q R+KLD ++ V +GY + S R+YNP +K + ++V FDE + + G +EH D T + D F PV TR+H+ T + S + P +LP S +P Y N S + E S+T +R E V +EAA K W+ +++E AL N W+ D LP G+ A+ KW +K K+ D +RYKARLVA+G+SQ+EG D+ ET PVAR T R V ++AA ++ Sbjct: 87 TPEHNGVVERKNRTVMGLTRSMLKQKELPNNFWAEGVATAVYLLNRSPTKSKPNKTPIEEWGGLRPTVHHLRIFGSIAYGLIPPQSRQKLDHRSEKCVFVGYSQQSSGYRLYNPISKKFSVQKHVTFDENGAWKWNSEGTKEHVMDHTPFL-DPFPVDPVD-NDTRNHSSTPTTPTQTTVPIQTISHNATLTPLTTLPRHSQDP--------YAHNPSTSSHSNPE----------------------TSQTLTKRISKPPSWLQDYHTDVVEEETQLFALNVYDPI---TFSEAATKVEWQLAMKEEIAALRKNTTWDLTD---LPEGKNAVGVKWTYKTKVGPDGEVSRYKARLVAKGYSQIEGIDYTETFAPVARFETIRVVIAIAAHRGWK 443
BLAST of mRNA_H-paniculata_contig11564.1001.1 vs. uniprot
Match: A0A5N6NKC8_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NKC8_9ASTR) HSP 1 Score: 163 bits (412), Expect = 1.700e-40 Identity = 129/398 (32.41%), Postives = 183/398 (45.98%), Query Frame = 1 Query: 1 TPQQNGVAERSWRSIFEIARASKITANMGRRYWEEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTAYIMFQSQQRRKLDDKAWAGVILGYDEDSPSCRIYNPENKSVQLSRNVRFDEEDSVTGH-RGQQEH--DGTRNMEDCFSTPPVTPTVTRSHAQGEQASVTETEDWASASEMPP---ILPTHSLPATSANPFSVLSDGDYGENNGNSKMKDAEPSVEDAPSAGTAAPASGGNTTKQSRTEAQRPXXXXXXXXXXXXXXXXXEDPGATARVAKAKGTGNLTEAAEK--WRATLEKEKGALVDNGVWESEDPGRLPAGRKAIRTKWIFKRKLKEDSSEARYKARLVAQGFSQVEGEDFFETSVPVARMSTFRTVFSLAAEHDFE 1170 TP+ NGV ER R+I + R+ + +W E V +AVY LNR+PT+ TP E+W G P + HLR+FG AY + Q R KLD ++ V +GY + S R+YNP K + ++V FDE+ + + G +EH D T + D F PV P +H+ S+T T+ + P + P +LP S +P Y N S + E T Q+RT+ R E V EAA K W+ +++E AL N W+ D LP G+ A+ KW +K K+ D +RYKARLVA+G+SQVEG D+ ET PVAR T R V ++AA ++ Sbjct: 87 TPEHNGVVERKNRTIMGLTRSMLKQKELPNSFWAEGVATAVYLLNRSPTKSKPNKTPIEEWGGLKPTVHHLRIFGSIAYSLIPPQNRHKLDHRSEKCVFVGYSQQSSGYRLYNPITKRFSVQKHVTFDEDGAWRWNSEGTKEHVTDPTHFL-DPF---PVEP-ADNNHSH---TSLTPTQTTVPTQIISPNATLTPLTTLPGHSQDP--------YAHNPSTSSHTNPE--------------------TSQTRTK--RVSKPPSWLQDYHTDAVEEETQLFVLNVCDPI---TFYEAAPKAEWQLAMKEEIAALKKNNTWDLTD---LPEGKNAVGVKWTYKTKVGPDGEVSRYKARLVAKGYSQVEGIDYTETFAPVARFETIRVVIAIAAHRGWK 440
BLAST of mRNA_H-paniculata_contig11564.1001.1 vs. uniprot
Match: A0A151TVS9_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TVS9_CAJCA) HSP 1 Score: 162 bits (411), Expect = 3.180e-40 Identity = 118/392 (30.10%), Postives = 166/392 (42.35%), Query Frame = 1 Query: 1 TPQQNGVAERSWRSIFEIARASKITANMGRRYWEEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTAYIMFQSQQRRKLDDKAWAGVILGYDEDSPSCRIYNPENKSVQLSRNVRFDEEDSVTGHRGQQEHDGTRNMEDCFSTPPVTPTVTRSHAQGEQASVTETEDWASASEMPPILPTHSLPATSANPFSVLSDGDYGENNGNSKMKDAEPSVEDAPSAGTAAPASGGNTTKQSRTEAQRPXXXXXXXXXXXXXXXXXEDPGATARVAKAKGTGNLTEAAEK--WRATLEKEKGALVDNGVWESEDPGRLPAGRKAIRTKWIFKRKLKEDSSEARYKARLVAQGFSQVEGEDFFETSVPVARMSTFRTVFSLAAEHDFE 1170 TPQQNGVAER R+I ++ R M R +W EAV +AVY LNR PT+ TP E W G P + HL++FGC AY Q R+KLDDK + +GY +S + ++YNP K V +SR+V FDEE DW+ ++ P++ NP + Y E NG+ EP SR + QR ++ + EA+ WR +++E A+ N WE D LPA +K I KW++K K K R KARLV +G+ Q G D+FE PVAR+ T R + SL+A+++++ Sbjct: 515 TPQQNGVAERKNRTIMDMVRCMLKAKQMPREFWAEAVSTAVYILNRCPTKSVCDKTPEEAWSGRKPSIRHLKIFGCIAYAHVPDQLRKKLDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDEEGMW--------------------------------------------DWSFKAQKEPVI----------NPEN------YEEENGHVNPTPDEPET-------------------SSRPQRQRRLPARLEDYVVGNDNDPSDEEIINFALFADCEPVTFEEASNNQYWRKAMDEEIHAIEKNQTWELTD---LPADKKPIGVKWVYKTKYKSSGEIDRLKARLVVKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWK 824
BLAST of mRNA_H-paniculata_contig11564.1001.1 vs. uniprot
Match: A0A540MY60_MALBA (Integrase catalytic domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540MY60_MALBA) HSP 1 Score: 162 bits (409), Expect = 3.340e-40 Identity = 126/394 (31.98%), Postives = 183/394 (46.45%), Query Frame = 1 Query: 1 TPQQNGVAERSWRSIFEIARASKITANMGRRYWEEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTAYIMFQSQQRRKLDDKAWAGVILGYDEDSPSCRIYNPENKSVQLSRNVRFDEEDSVTGHRGQQEHDGTRNMEDCFSTPPVTPTVTRSHAQGEQASVTETEDWASASEMPPILPTHSLPATSANPFSVLSDGDYGENNGNSKMKDAEPSVEDAPSAGTAAPASGGNTTKQSRTEAQRPXXXXXXXXXXXXXXXXXEDPGATARVAKAKG----TGNLTEAAEKWRATLEKEKGALVDNGVWESEDPGRLPAGRKAIRTKWIFKRKLKEDSSEARYKARLVAQGFSQVEGEDFFETSVPVARMSTFRTVFSLAAEHDFE 1170 TPQQNGVAER R+I + R + + +W EAV AVY LNR+PT G TP + W G P +DH RVFGC +++ +R KLDDK+ V++G E+S + R+++ ++ + +SR+V F+E++ N ++ + EQA +T+ E W + S V+ D +ED S + G+T+++ RT +RP E+ + A +A T T +EKWR +++E A+ N WE D LP G K I KW+FK KL E+ +YKA LVA+G+SQ G DF E PVARM T R V SLAA+ +E Sbjct: 308 TPQQNGVAERKNRTIMNMVRCMLSEKQIPKTFWPEAVNWAVYVLNRSPTLAVKGKTPEKAWSGHKPSVDHFRVFGCISHVHIPDSKRVKLDDKSLKCVLMGVSEESKAYRLFDLISQKIIISRDVVFEEDEQW-------------NWDEVY----------------EQAVLTDLE-WETXXXXXXXXXEGS---------GVIED------------------IEDDESHEVGEAMTEGSTSQERRT--RRPPTWMRDYETGEGLSD--EENVSMAHLALFTNGDPTTYYDTVKSEKWRQAMQQEIEAIEKNDTWELTD---LPPGGKTIGVKWVFKTKLNENGEVDKYKAWLVAKGYSQQYGIDFSEVFAPVARMDTIRMVISLAAQRSWE 637
BLAST of mRNA_H-paniculata_contig11564.1001.1 vs. uniprot
Match: UPI000D0CBDB3 (uncharacterized protein LOC100822297 isoform X1 n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=UPI000D0CBDB3) HSP 1 Score: 159 bits (401), Expect = 3.410e-40 Identity = 122/397 (30.73%), Postives = 189/397 (47.61%), Query Frame = 1 Query: 1 TPQQNGVAERSWRSIFEIARASKITANMGRRYWEEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTAYIMFQSQQRRKLDDKAWAGVILGYDEDSPSCRIYNPENKSVQLSRNVRFDEEDSVTGHRG-QQEHDGTRNMEDC------FSTPPVTPTVTRSHAQGEQASVTETEDWASASEMPPILPTHSLPATSANPFSVLSDGDYGENNGNSKMKDAEPSVEDAPSAGTAAPASGGNTTKQSRTEAQRPXXXXXXXXXXXXXXXXXEDPGATARVAKAKGTGNLTEAAEKWRATLEKEKGALVDNGVWESEDPGRLPAGRKAIRTKWIFKRKLKEDSSEARYKARLVAQGFSQVEGEDFFETSVPVARMSTFRTVFSLAAEHDFE 1170 TPQQNGV ER +++ +AR+ + NM W E V +AVY LNR+PT+ TPYE W P ++HLR+FGC AY KL DKA V+LGY+ ++ + R+Y+P K+ +SR+V FDEE + ++E++ +++ FS T+ + ++A+ E ++ E PP P S P T +V+ D + ED SA P G Q + P ++P + V++AK + W+ +E+E ++++N W D LPAG+K I KW+FK K ++KARLVA+G+ Q +G D+ E PVAR+ T R + + AA+ +E Sbjct: 49 TPQQNGVVERRNQTVVGMARSLLKSKNMPGTLWGEVVSTAVYILNRSPTKSVENKTPYEAWFKRKPNIEHLRIFGCVAYAKVTKLNLSKLADKATRTVMLGYETNTKAYRLYDPATKNAIVSRDVVFDEEKGWDWSKVLEKENERAKDIFTVTYPAVVFSRTEHDDTIQSEPSTSKKATTNENSEFEPTIEEPPAAP--STPGTPQ--MTVVDDEKH----------------EDQGSASEVGPQ--GYRNIQELMDIAPPCNLEDEELYFIGT----DEP---SPVSEAKQNSS-------WKHAMEEELKSILENDTWNMVD---LPAGQKPIGLKWVFKLKKDPSGKIVKHKARLVAKGYVQRKGVDYDEVFAPVARLETVRMLAARAAQEGWE 406
BLAST of mRNA_H-paniculata_contig11564.1001.1 vs. uniprot
Match: A0A1J3H758_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3H758_NOCCA) HSP 1 Score: 162 bits (409), Expect = 4.780e-40 Identity = 121/403 (30.02%), Postives = 195/403 (48.39%), Query Frame = 1 Query: 1 TPQQNGVAERSWRSIFEIARASKITANMGRRYWEEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTAYIMFQSQQRRKLDDKAWAGVILGYDEDSPSCRIYNPENKSVQLSRNVRFDEEDSVTGHRGQQE-HDGTRNMEDCFSTPPVTPTVTRSHAQGEQASVTETEDWASASEMPPILPTHSLPATS-ANPFSVLSDGDYGENNGNSKMKDAEPSVEDAP-----SAGTAAPASGGNTTKQSRTEAQRPXXXXXXXXXXXXXXXXXEDPGATARVAKAKGTGNLTEAAEK------WRATLEKEKGALVDNGVWESEDPGRLPAGRKAIRTKWIFKRKLKEDSSEARYKARLVAQGFSQVEGEDFFETSVPVARMSTFRTVFSLAAEHDFE 1170 TPQQNGVAER R + E+AR+ N+ +R+W +AV +A Y +NR PT+ N +P++ + P +D+LRVFGC +++ +QR KLD K+ G+ +GY + + Y PE + V +SR+V+F E + +E D + + D +T V R EQ S E +H +S +N LS+G+ E + ++ +P++++ P S P++ NT + A+ P A A G + ++ E+ W ++ E A+ N W+ D LP G+KA+ +KW+F K R+KARLVA+GF+Q G+D+F+T PVA++ T R V +LAA D++ Sbjct: 111 TPQQNGVAERKNRHLMEVARSMMFHTNVPKRFWGDAVVTACYLINRIPTKILNDLSPFKVLNQTEPSIDYLRVFGCVCFVLIPGEQRNKLDAKSTKGMFIGYSINQKGYKCYIPETRRVVVSRDVKFIESKGYYEEKNWEELKDLSYSSSDRTATLRVLLESLRDGVSQEQIPTHPISQTISNDEPQDQGTSHDATNSSESNDDEALSNGEQDEPQNSVEV---QPTLQEEPPVLRRSQRIRKPSNWVNTQVYYNSNAEAHPIQATCSLAFI--------PQAHQAYINALDNGAIPQSYEEAMELMVWIDAVDDETQAMERNHTWDEAD---LPKGKKAVTSKWVFTIKYLSTGEIERHKARLVARGFTQTYGQDYFDTFAPVAKLHTVRVVLALAANLDWD 499
BLAST of mRNA_H-paniculata_contig11564.1001.1 vs. uniprot
Match: A0A151SW32_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SW32_CAJCA) HSP 1 Score: 161 bits (408), Expect = 6.840e-40 Identity = 117/390 (30.00%), Postives = 165/390 (42.31%), Query Frame = 1 Query: 1 TPQQNGVAERSWRSIFEIARASKITANMGRRYWEEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTAYIMFQSQQRRKLDDKAWAGVILGYDEDSPSCRIYNPENKSVQLSRNVRFDEEDSVTGHRGQQEHDGTRNMEDCFSTPPVTPTVTRSHAQGEQASVTETEDWASASEMPPILPTHSLPATSANPFSVLSDGDYGENNGNSKMKDAEPSVEDAPSAGTAAPASGGNTTKQSRTEAQRPXXXXXXXXXXXXXXXXXEDPGATARVAKAKGTGNLTEAAEKWRATLEKEKGALVDNGVWESEDPGRLPAGRKAIRTKWIFKRKLKEDSSEARYKARLVAQGFSQVEGEDFFETSVPVARMSTFRTVFSLAAEHDFE 1170 TPQQNGVAER R+I ++ R M R +W EAV +AVY LNR PT+ TP E W G P + HL++FGC AY Q R+KLDDK + +GY +S + ++YNP K V +SR+V FDEE DW+ ++ P++ NP + Y E NG+ EP P +Q R A+ A + N + WR +++E A+ N WE D LPA ++ I KW++K K K R KARLVA+G+ Q G D+FE PVAR+ T + SL+A+++++ Sbjct: 590 TPQQNGVAERKNRTIMDMVRCMLKAKQMPREFWAEAVSTAVYILNRCPTKSVCDKTPEEAWSGRKPSIRHLKIFGCIAYAHVPDQLRKKLDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDEEGMW--------------------------------------------DWSFKAQKEPVI----------NPEN------YEEENGHVNPTPDEPETSSRPQ-------------RQRRLPARLEDYVVGNDNDPSDEEIINFALFADCEPVTFEEASNN----QHWRKAMDEEIHAIEKNQTWELTD---LPADKRPIGVKWVYKTKYKSSGEIDRLKARLVAKGYKQKPGIDYFEVFAPVARLDTIHMLISLSAQNNWK 899
BLAST of mRNA_H-paniculata_contig11564.1001.1 vs. uniprot
Match: A0A537QRN8_9PROT (DDE-type integrase/transposase/recombinase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537QRN8_9PROT) HSP 1 Score: 159 bits (403), Expect = 3.650e-39 Identity = 129/397 (32.49%), Postives = 189/397 (47.61%), Query Frame = 1 Query: 1 TPQQNGVAERSWRSIFEIARASKITANMGRRYWEEAVRSAVYCLNRAPTRPHNGGTPYEKWHGETPKLDHLRVFGCTAYIMFQSQQRRKLDDKAWAGVILGYDEDSPSC-RIYNPENKSVQLSRNVRFDEEDSVTGHRGQQEHDGTRNMEDCFSTPPVTPTVTRSHAQGEQASVTETEDWASASEMP---PILPTHSLPATSANPFSVLSDGDYGENNGNSKMKDAEPSVEDAPSAGTAAPASGGNTTKQSRTEA---QRPXXXXXXXXXXXXXXXXXEDPGATARVAKAKGTGNLTEAAEKWRATLEKEKGALVDNGVWESEDPGRLPAGRKAIRTKWIFKRKLKEDSSEARYKARLVAQGFSQVEGEDFFETSVPVARMSTFRTVFSLAAEHDFE 1170 T QNGV+ER RSI E AR A++G R+W EAV +AVY LNR+PTR G TPYE W+G P L HLR FGC A++ ++R+KL K+ V+LGY ++ R+++P +S+ + NV FDEE++ GT +E ++P +A E+A T+ + S +M ++ +H T+ +V +V DA T N T S+ A +R +D + E A+ W+ +++E +L N W E RLP RKAI +W+FK+K+ D+S RYKARLV +G+ Q E D+ ET PVA T R + +LAA+ D+E Sbjct: 625 TQNQNGVSERKIRSIVEKARCMLHDASLGARFWAEAVSTAVYLLNRSPTRALEGQTPYEAWYGSRPSLHHLRRFGCNAFVHVPPEKRKKLQAKSRCCVMLGYVHNTTKLWRVWDPVQRSIVNAANVVFDEENASAA--------GTL-LEQAMTSP---------NALLEEADETQDGVFESDDDMTMDLDVMGSHEHMITTPVHSAVXXXXXXXXXXXXXXXXXXXEAV-DADRQSTRREPVNSNVTAPSQESADVLRRSTRTRLPPKWHSMFMAQVQD--HSDEPTSYWDAVGCAEHAQ-WQKAIDEEYASLQKNSTWSLE---RLPPNRKAIACRWVFKKKINADNS-IRYKARLVIKGYEQRESIDYDETFAPVAMFKTLRILLALAAQEDWE 995 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11564.1001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11564.1001.1 >prot_H-paniculata_contig11564.1001.1 ID=prot_H-paniculata_contig11564.1001.1|Name=mRNA_H-paniculata_contig11564.1001.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=391bp TPQQNGVAERSWRSIFEIARASKITANMGRRYWEEAVRSAVYCLNRAPTRback to top mRNA from alignment at H-paniculata_contig11564:6932..8155- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11564.1001.1 ID=mRNA_H-paniculata_contig11564.1001.1|Name=mRNA_H-paniculata_contig11564.1001.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1224bp|location=Sequence derived from alignment at H-paniculata_contig11564:6932..8155- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11564:6932..8155- >mRNA_H-paniculata_contig11564.1001.1 ID=mRNA_H-paniculata_contig11564.1001.1|Name=mRNA_H-paniculata_contig11564.1001.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2346bp|location=Sequence derived from alignment at H-paniculata_contig11564:6932..8155- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |