prot_H-paniculata_contig38069.9983.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig38069.9983.1
Unique Nameprot_H-paniculata_contig38069.9983.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length53
Homology
BLAST of mRNA_H-paniculata_contig38069.9983.1 vs. uniprot
Match: A0A6H5JMF4_9PHAE (Vps8 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF4_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 2.600e-25
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0
Query:    1 MENLDAASRQLARNATYGKHGPGVCTATAAHSKFIAVGTSRGLILLFDHFQV 52
            MENLDAASRQLARNA YGKHGPGVCTATAAHSKFIAVGTSRGLILLFDHFQV
Sbjct:  381 MENLDAASRQLARNAAYGKHGPGVCTATAAHSKFIAVGTSRGLILLFDHFQV 432          
BLAST of mRNA_H-paniculata_contig38069.9983.1 vs. uniprot
Match: D8LRX0_ECTSI (Vps8 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX0_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 9.040e-25
Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 0
Query:    1 MENLDAASRQLARNATYGKHGPGVCTATAAHSKFIAVGTSRGLILLFDHFQ 51
            MENLDAASRQLARNA YGKHGPGVCTATAAHSKFIAVGTSRGLILLFDHFQ
Sbjct:  412 MENLDAASRQLARNAAYGKHGPGVCTATAAHSKFIAVGTSRGLILLFDHFQ 462          
BLAST of mRNA_H-paniculata_contig38069.9983.1 vs. uniprot
Match: A0A2D4BIS2_PYTIN (Vacuolar protein sorting-associated protein 8 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BIS2_PYTIN)

HSP 1 Score: 68.6 bits (166), Expect = 3.530e-12
Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    4 LDAASRQLARNATYGKHGPGVCTATAAHSKFIAVGTSRGLILLFDHFQ 51
            +DA SRQL +N  + +HGPG  T  A HSKFIA+GTS+GL+L+FDHFQ
Sbjct:    1 MDAISRQLQKNLEFKEHGPGSPTVVAIHSKFIAIGTSKGLVLIFDHFQ 48          
BLAST of mRNA_H-paniculata_contig38069.9983.1 vs. uniprot
Match: A0A8K1FDH6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDH6_PYTOL)

HSP 1 Score: 67.4 bits (163), Expect = 9.000e-12
Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 MENLDAASRQLARNATYGKHGPGVCTATAAHSKFIAVGTSRGLILLFDHFQ 51
            +E ++  SRQL +N  + +HGPG  T  A HSKFIA+GTS+GL+L+FDHFQ
Sbjct:  194 VEAMETISRQLKKNIEFKEHGPGSPTVVAIHSKFIAIGTSKGLVLIFDHFQ 244          
BLAST of mRNA_H-paniculata_contig38069.9983.1 vs. uniprot
Match: A0A2P4XRT3_9STRA (Vacuolar protein sorting-associated protein 8 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XRT3_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.540e-11
Identity = 28/51 (54.90%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 MENLDAASRQLARNATYGKHGPGVCTATAAHSKFIAVGTSRGLILLFDHFQ 51
            +E ++A SRQL +N  + ++GPG  T  A HSKFIA+GTS+GL+++FDHFQ
Sbjct:  170 VEPMEAISRQLRKNIEFKEYGPGSPTVVAIHSKFIAIGTSKGLVIIFDHFQ 220          
BLAST of mRNA_H-paniculata_contig38069.9983.1 vs. uniprot
Match: A0A0W8DEQ5_PHYNI (Phosphatidylinositol transfer protein beta isoform n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DEQ5_PHYNI)

HSP 1 Score: 65.9 bits (159), Expect = 3.120e-11
Identity = 28/51 (54.90%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 MENLDAASRQLARNATYGKHGPGVCTATAAHSKFIAVGTSRGLILLFDHFQ 51
            +E ++A SRQL +N  + ++GPG  T  A HSKFIA+GTS+GL+++FDHFQ
Sbjct:  153 VEPMEAISRQLRKNIEFKEYGPGSPTVVAIHSKFIAIGTSKGLVIIFDHFQ 203          
BLAST of mRNA_H-paniculata_contig38069.9983.1 vs. uniprot
Match: A0A2P4Y7R6_9STRA (Glucosidase 2 subunit beta (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y7R6_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.140e-11
Identity = 28/51 (54.90%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 MENLDAASRQLARNATYGKHGPGVCTATAAHSKFIAVGTSRGLILLFDHFQ 51
            +E ++A SRQL +N  + ++GPG  T  A HSKFIA+GTS+GL+++FDHFQ
Sbjct:  694 VEPMEAISRQLRKNIEFKEYGPGSPTVVAIHSKFIAIGTSKGLVIIFDHFQ 744          
BLAST of mRNA_H-paniculata_contig38069.9983.1 vs. uniprot
Match: A0A0P1AJW9_PLAHL (Vacuolar assembly/sorting protein VPS8 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJW9_PLAHL)

HSP 1 Score: 65.9 bits (159), Expect = 3.140e-11
Identity = 28/51 (54.90%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 MENLDAASRQLARNATYGKHGPGVCTATAAHSKFIAVGTSRGLILLFDHFQ 51
            +E ++A SRQL +N  + ++GPG  T  A HSKFIA+GTS+GL+++FDHFQ
Sbjct:  169 VEPMEAISRQLRKNIEFKEYGPGSPTVVAIHSKFIAIGTSKGLVIIFDHFQ 219          
BLAST of mRNA_H-paniculata_contig38069.9983.1 vs. uniprot
Match: A0A484E0X2_BRELC (Vps8 domain-containing protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A484E0X2_BRELC)

HSP 1 Score: 65.9 bits (159), Expect = 3.140e-11
Identity = 28/51 (54.90%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 MENLDAASRQLARNATYGKHGPGVCTATAAHSKFIAVGTSRGLILLFDHFQ 51
            +E ++A SRQL +N  + ++GPG  T  A HSKFIA+GTS+GL+++FDHFQ
Sbjct:  167 VEPMEAISRQLRKNIEFKEYGPGSPTVVAIHSKFIAIGTSKGLVIIFDHFQ 217          
BLAST of mRNA_H-paniculata_contig38069.9983.1 vs. uniprot
Match: G4Z679_PHYSP (Vps8 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z679_PHYSP)

HSP 1 Score: 65.9 bits (159), Expect = 3.140e-11
Identity = 28/51 (54.90%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 MENLDAASRQLARNATYGKHGPGVCTATAAHSKFIAVGTSRGLILLFDHFQ 51
            +E ++A SRQL +N  + ++GPG  T  A HSKFIA+GTS+GL+++FDHFQ
Sbjct:  154 VEPMEAISRQLRKNIEFKEYGPGSPTVVAIHSKFIAIGTSKGLVIIFDHFQ 204          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38069.9983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMF4_9PHAE2.600e-2598.08Vps8 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LRX0_ECTSI9.040e-2598.04Vps8 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A2D4BIS2_PYTIN3.530e-1262.50Vacuolar protein sorting-associated protein 8 n=1 ... [more]
A0A8K1FDH6_PYTOL9.000e-1256.86Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4XRT3_9STRA2.540e-1154.90Vacuolar protein sorting-associated protein 8 n=1 ... [more]
A0A0W8DEQ5_PHYNI3.120e-1154.90Phosphatidylinositol transfer protein beta isoform... [more]
A0A2P4Y7R6_9STRA3.140e-1154.90Glucosidase 2 subunit beta (Fragment) n=1 Tax=Phyt... [more]
A0A0P1AJW9_PLAHL3.140e-1154.90Vacuolar assembly/sorting protein VPS8 n=1 Tax=Pla... [more]
A0A484E0X2_BRELC3.140e-1154.90Vps8 domain-containing protein n=2 Tax=Peronospora... [more]
G4Z679_PHYSP3.140e-1154.90Vps8 domain-containing protein n=1 Tax=Phytophthor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig38069contigH-paniculata_contig38069:382..540 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig38069.9983.1mRNA_H-paniculata_contig38069.9983.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig38069 358..540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig38069.9983.1 ID=prot_H-paniculata_contig38069.9983.1|Name=mRNA_H-paniculata_contig38069.9983.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
MENLDAASRQLARNATYGKHGPGVCTATAAHSKFIAVGTSRGLILLFDHF
QV*
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