prot_H-paniculata_contig37969.9956.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig37969.9956.1
Unique Nameprot_H-paniculata_contig37969.9956.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length131
Homology
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BLAST of mRNA_H-paniculata_contig37969.9956.1 vs. uniprot
Match: A0A6H5KXM6_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM6_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 3.470e-22
Identity = 58/126 (46.03%), Postives = 79/126 (62.70%), Query Frame = 0 
Query:    1 VPL--ESFKPFWRWFWLATETLQRTGAWEAGERAGRRGFAGFLKKATANKRIADADAGTFLVRFSSSKGGAMAVH-CKSKSSAVMNVRVNVNEAGQLWVDDKPNEK-HHNLAAFVMSVRHMKCLHP 122
            VP+  +  +PFWRWFW A  TL+RT AW  G      GFAGF+KK TA   ++  + GTFLVRFS+SK GA+AVH  + +   V++  VNV+ AG L V+ +  E+  H+L   V+S   +K LHP
Sbjct:  845 VPISRKKLEPFWRWFWQAVTTLRRTPAWSTGLNGPALGFAGFMKKETALALLSSEEPGTFLVRFSTSKPGALAVHYVRKRRGTVVSGIVNVSSAGALSVEKRAGERTFHDLDDLVLSTGQLKFLHP 970
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BLAST of mRNA_H-paniculata_contig37969.9956.1 vs. uniprot
Match: D8LEZ2_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ2_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 2.380e-17
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 0 
Query:    1 VPL--ESFKPFWRWFWLATETLQRTGAWEAGERAGRRGFAGFLKKATANKRIADADAGTFLVRFSSSKGGAMAVH-CKSKSSAVMNVRVNVNEAGQLWVDDKPNEK-HHNLAAFVMSVRHMKCLHP 122
            VP+  +  +PFWRWFW A  TL+RT AW  G      GFAGF+KK TA   ++ A+ GTFLVRF          H  + +   V++  VNV+ AG L V+ +  E+  H+L   V+S   +K LHP
Sbjct:  560 VPISRKKLEPFWRWFWQAVTTLRRTPAWSTGLHGPALGFAGFMKKDTALTLLSSAEPGTFLVRFXXXXXXXXXXHYVRKRRGTVVSGIVNVSSAGALSVEKRAGERTFHDLDDLVLSTEQLKFLHP 685
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig37969.9956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXM6_9PHAE3.470e-2246.03SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LEZ2_ECTSI2.380e-1741.27SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036860SH2 domain superfamilyGENE3D3.30.505.10coord: 37..131
e-value: 5.2E-12
score: 47.6
IPR036860SH2 domain superfamilySUPERFAMILY55550SH2 domaincoord: 37..116
IPR000980SH2 domainPFAMPF00017SH2coord: 37..99
e-value: 1.8E-6
score: 27.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig37969contigH-paniculata_contig37969:1165..1557 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig37969.9956.1mRNA_H-paniculata_contig37969.9956.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig37969 1165..1557 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig37969.9956.1 ID=prot_H-paniculata_contig37969.9956.1|Name=mRNA_H-paniculata_contig37969.9956.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=131bp
VPLESFKPFWRWFWLATETLQRTGAWEAGERAGRRGFAGFLKKATANKRI
ADADAGTFLVRFSSSKGGAMAVHCKSKSSAVMNVRVNVNEAGQLWVDDKP
NEKHHNLAAFVMSVRHMKCLHPDNTPKEWVF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036860SH2_dom_sf
IPR000980SH2