prot_H-paniculata_contig3796.9955.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3796.9955.1
Unique Nameprot_H-paniculata_contig3796.9955.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length540
Homology
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: D8LGN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGN3_ECTSI)

HSP 1 Score: 677 bits (1747), Expect = 3.560e-239
Identity = 421/544 (77.39%), Postives = 437/544 (80.33%), Query Frame = 0
Query:    9 VENGMGYVEQAPSPFVPD--GVVPVNVGGVPGAMPMGPGSVGG--GTPIA-----ITRVYVGNLSWETEWQDLKDHMRSAGEVVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDREAAXXXXXXXXNQHRNGPGQMSGXXXPRGSGNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRESGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMG----HMQMHQQMQH---------GGVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXASIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNKT--------IPNANNAHANSGA 522
            +ENGMGYVEQ P+ +  D  GVV   V G+ G MP+    VGG    P+      ITRVYVGNLSWETEWQDLKDHMR+AGEVVRADVMRDASGRSKGCGIVEYRTP EAQ AINTLLDTELKGRLIFVREDREAAXXXXXXXX     GP         RGSGNQNARVYVGNLAWDVAWQDLKDHMR LGGEVIRADVMTDQGGRSRGCGIVE+A  EQA QAIEQLNNSELK RMIFVREDRESGTPG    XXXXX         MVGQMQM PMGAF GQPFA GPG LMGQ MG     MQMHQ             G +PQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYED RGANRAIRELNNTALGGRPIFVREDREQ + RQ   XXXXXXXXXXXXXXXXXXXXX ++AGRQLYVGNLSFETTWADLKDHFRT+GEVERADVMMD SRRSKGWGTVRFRT EEAQ+AIQELNGTELGSRQIEVRED+KT         P A NA A + A
Sbjct:    1 MENGMGYVEQ-PAQYAQDANGVV---VNGMGGVMPV----VGGMSAPPVGVMTTGITRVYVGNLSWETEWQDLKDHMRTAGEVVRADVMRDASGRSKGCGIVEYRTPAEAQEAINTLLDTELKGRLIFVREDREAAXXXXXXXXXXMXXGP---------RGSGNQNARVYVGNLAWDVAWQDLKDHMRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAIEQLNNSELKNRMIFVREDRESGTPGXXXXXXXXXXXXXXXXX-MVGQMQMGPMGAFGGQPFAAGPGALMGQSMGGHMQQMQMHQXXXXXXXXXXXXXGAMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTALGGRPIFVREDREQQNPRQXX-XXXXXXXXXXXXXXXXXXXXXENLAGRQLYVGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKGWGTVRFRTQEEAQSAIQELNGTELGSRQIEVREDSKTGGXXXXXSYPKAGNAKAGATA 525          
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A6H5J8N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8N0_9PHAE)

HSP 1 Score: 525 bits (1353), Expect = 1.510e-181
Identity = 310/377 (82.23%), Postives = 319/377 (84.62%), Query Frame = 0
Query:  159 PRGSGNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRESGTPGMGHGXXXXXPQQFNQQQQ-MVGQMQMPPMGAFAGQPFAPGPGPLMGQPMG----HMQMHQQMQHG------GVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXASIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNKT------IPNANNAHA 518
            PRGSGNQNARVYVGNLAWDVAWQDLKDHMR LGGEVIRADVMTDQGGRSRGCGIVE+A  EQA QAIEQLNNSELK RMIFVREDRESGTPG GH XXXXX          MVGQMQM PMGAF GQPFA GPG LMGQ MG     MQMHQ            +PQATGNRIYVGNLAWTVEWQELKDHMRTVGKV+HADVLQDGDGRSKGCGIVEYED RGANRAIRELNNTALGGRPIFVREDREQ + RQ   XXXXXXXXXXXXXXXXXXXXX ++AGRQLYVGNLSFETTWADLKDHFRT+GEVERADVMMD SRRSKGWGTVRFRT EEAQ+AIQELNGTELGSRQIEVRED+KT       P A NA A
Sbjct:    5 PRGSGNQNARVYVGNLAWDVAWQDLKDHMRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAIEQLNNSELKNRMIFVREDRESGTPGSGHXXXXXXXXXXXXXXXXMVGQMQMGPMGAFGGQPFAAGPGALMGQSMGGHMQQMQMHQXXXXXXXXXXXAMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVLHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTALGGRPIFVREDREQQNPRQXXXXXXXXXXXXXXXXXXXXXXXXENLAGRQLYVGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKGWGTVRFRTQEEAQSAIQELNGTELGSRQIEVREDSKTGGGGGSYPKAGNAKA 381          
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A7S3Q3W4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3W4_9STRA)

HSP 1 Score: 345 bits (885), Expect = 4.880e-110
Identity = 215/457 (47.05%), Postives = 266/457 (58.21%), Query Frame = 0
Query:   57 RVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDREAAXXXXXXXXNQHRNGPGQMSGXXXPRGSGNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRESGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMGHMQMHQQMQHGGVPQATGNR----IYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXASIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNK 508
            RVYVGNL+WE  W++LKDHM+ AG EV RADV+    GRSKGCGIVE+ +   AQ A+  L DT+L GR IFVREDRE+          Q    P   +          Q+ RVYVGNL+W+VAWQDLKD+MR+ G EV+ ++VMT+  GRS+GCGIVE+A  E+A  A   L+++ELK RMIFVREDRE+ +                                                             GG  Q  GNR    +YVGNLA+   WQ+LKDHMR  G V  A+VLQ  DG SKGCGIV Y++ R ++RAIREL  + L GRPIFVREDREQ        XXXXXXXX XX X         +  G QL+VGNLSF+T W +LKDHFR  G+VER +V+     R KG+GTVRF   ++A  AI+ LNG EL  R+++VR DNK
Sbjct:   84 RVYVGNLAWEVTWKELKDHMKEAGCEVTRADVLASPDGRSKGCGIVEFASAEGAQRAL-LLNDTDLAGRQIFVREDRESGNGGGYY--TQQPGNPASATSGGNDASEEKQSCRVYVGNLSWEVAWQDLKDYMRSAG-EVVYSEVMTNADGRSKGCGIVEYATPEEAKNACTTLSDTELKDRMIFVREDRETSS-------------------------------------------------------------GGGNQQGGNRGSTSVYVGNLAYETSWQDLKDHMRAAGNVDQANVLQQEDGTSKGCGIVVYQNARDSSRAIRELQESVLHGRPIFVREDREQGGXXXXXXXXXXXXXXFXXRXRGGHQRKPVT-PGTQLFVGNLSFDTNWTELKDHFRQCGDVERVEVIEGHDGRKKGFGTVRFYNAKDAANAIERLNGVELQGRELQVRVDNK 474          
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A7S4IUY5_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IUY5_9STRA)

HSP 1 Score: 345 bits (886), Expect = 1.200e-109
Identity = 237/459 (51.63%), Postives = 277/459 (60.35%), Query Frame = 0
Query:   57 RVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDREAAXXXXXXXXNQHRNGPGQMSGXXXPR------GSGNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRESGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMGHMQMHQQMQHGGVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXASIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNK 508
            RVYVGNLSWET W++LKDHM++ G EV RADV+    GRSKGCGI+E+ T   AQ A+ TL DTEL GR IFVREDRE    XXXXXX            XXX        G   Q  RVYVGNL+WDVA QDLKDHMR  G EV+ A+VM +  GRS+GCGIVEFA A +A +AI  L ++ELKGRMIFVREDRE+        XXX                     G F G+                                   +YVGNLA+   WQ+LKDHMR  G V  A++LQ  DGRSKGCGIV Y+  + A+RAIREL NT L GRPIFVREDREQ S           XXXXXXXXXXXXXX     AG QL+VGNLS++T+W +LKDHFR  G+VERA+VM     +S+G+GTVRF    +A  AIQ LNG EL  R +EV+ D K
Sbjct:  113 RVYVGNLSWETTWRELKDHMKTTGCEVTRADVLCSPDGRSKGCGIIEFETAEGAQRAVLTLNDTELMGRQIFVREDREEGSGXXXXXXXXXXXXXXXXXXXXXXXXXRYASGGDAQTRRVYVGNLSWDVALQDLKDHMRNAG-EVVFAEVMKEHDGRSKGCGIVEFATAAEAEEAISTLTDTELKGRMIFVREDRETTXXXXXXXXXXAV------------------FGGFQGRXXX----------------------------XXTSVYVGNLAYETSWQDLKDHMRKAGNVDQANILQGEDGRSKGCGIVRYQRPQEASRAIRELQNTMLTGRPIFVREDREQGS---------HHXXXXXXXXXXXXXXHSRVAAGCQLWVGNLSWDTSWRELKDHFRQCGDVERAEVMEGPDGQSRGFGTVRFYRQRDAANAIQRLNGVELQGRVLEVKIDGK 515          
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A7S2W0R0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W0R0_9STRA)

HSP 1 Score: 345 bits (885), Expect = 1.290e-109
Identity = 236/468 (50.43%), Postives = 279/468 (59.62%), Query Frame = 0
Query:   57 RVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDREAAXXXXXXXXNQHRNGPGQMSGXXXPR-------GSGNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRESGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMGHMQMHQQMQHGGVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXA--------SIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNK 508
            RVYVGNLSW+  W+DLKD M+S G EV RADV+    GRSKGCGIVE+ T   A+ A+ TL DTELKGR IFVREDRE+          Q   G    S    P        G  +Q  RVYVGNL+WDVAWQDLKDHMR  G EV  A+VM +  GRS+GCGIVEFA AE+A  AIE L +SELKGRMIFVREDRES + G G                          G F                          Q G    +T   ++VGNL++   WQ+LKDHMR  G V  A+VL   DGRSKGCGIV+Y+  + A+RA+REL N+ L GRPIF REDREQ  A   R   XXXXXXXXXXXXXXXXXXX         S  G QL+VGNLS +TTW DLKDHFR  G+VERA+V+    +RS  +GT+RF   ++A  AI  L+G E    ++EVR DN+
Sbjct:   98 RVYVGNLSWDVSWRDLKDWMQSTGCEVSRADVLASPDGRSKGCGIVEFATAEMAEKAVETLNDTELKGRAIFVREDRES--NSSSGYYTQQTEGESAPSPSASPAEADSCASGGESQGRRVYVGNLSWDVAWQDLKDHMRQAG-EVSFAEVMNESDGRSKGCGIVEFATAEEAKDAIETLTDSELKGRMIFVREDRESTSSGGG--------------------------GNF--------------------------QSGSKEGSTS--VFVGNLSYETSWQDLKDHMRQAGNVDEANVLSMDDGRSKGCGIVQYQRAQDADRAVRELQNSILQGRPIFCREDREQPGAAPSRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXSNSGGGSQLFVGNLSADTTWKDLKDHFRQCGDVERAEVV--EGKRST-FGTIRFFKEKDALDAISNLDGVEFQGHELEVRNDNR 505          
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A7S1BM28_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BM28_9STRA)

HSP 1 Score: 340 bits (872), Expect = 4.800e-109
Identity = 211/455 (46.37%), Postives = 251/455 (55.16%), Query Frame = 0
Query:   57 RVYVGNLSWETEWQDLKDHMRSAGE---VVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDREAAXXXXXXXXNQHRNGPGQMSGXXXPRGSGNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRESGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMGHMQMHQQMQHGGVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXASIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNK 508
            RVYVGNL+WE  WQDLKDHMR  GE   V RADVM+   GRSKGCG+VE+ T   A+ A+  + DTEL GR IFVREDREAA              PG   G            RVYVGNL+W+V WQDLKDHMR  G +V  A+VMT   GRS+GCGIVE+A AEQA +AI  LN+++L GRMIFVREDRE G                                           G                       +    +YVGNLA+   WQ+LKDHMR  G V  AD+L   DGRSKGC IV Y+  + A RAIREL N+ L GRPIFVREDREQ   R    XXXXXXX                    QL+VGNLS++TTW +LKDHF+  GEV+R +VM     R KG+GTV F   ++A +AI+ +NG EL  R +EV+ D K
Sbjct:    3 RVYVGNLAWEATWQDLKDHMRGLGEGCEVTRADVMQTHDGRSKGCGLVEFATAEGARRAVLMMNDTELHGRQIFVREDREAAAALPA---------PGATGGRAVDAAEAGSR-RVYVGNLSWEVVWQDLKDHMRQAG-DVQFAEVMTGGDGRSKGCGIVEYATAEQAQEAISTLNDTDLNGRMIFVREDREVG-------------------------------------------GXXXXXXXXXXXXXXXXXXXXXXXSNACSVYVGNLAFETPWQDLKDHMRAAGNVDKADILTGEDGRSKGCAIVIYQKPQEAARAIRELQNSVLQGRPIFVREDREQGGGRXXXXXXXXXXXRSAGYDGDYDRMPVDDGTATQLFVGNLSYDTTWEELKDHFKQCGEVDRVEVMEGPDGRKKGYGTVSFFKAKDASSAIRRMNGVELAGRPLEVKVDAK 403          
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A7S2KX18_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KX18_9STRA)

HSP 1 Score: 342 bits (876), Expect = 2.700e-108
Identity = 233/473 (49.26%), Postives = 276/473 (58.35%), Query Frame = 0
Query:   53 IAITRVYVGNLSWETEWQDLKDHMRSAGEVVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDREAAXXXXXXXXNQHRNGPGQMSGXXXPRGSGNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRESGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMGHMQMHQQMQHGGVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXA-----------------SIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNK 508
            +A  R+YVGNLSW   W++LKDHM+SAG+V RAD+++   GRSKGCGIVE+ T  EA  A+ TL D+EL GR IFVREDREA                         + +   + RVYVGNLA++VAWQDLKDHMR  G EV  A+VM    GRS+GCGIVEFA+ E A  AI+ LN++EL GR IFVREDRE    G GH    XX          VG       G +  Q             +G++                  +YVGNLA+   WQELKDHMR VG +  AD+LQ  DGRSKGCGIV Y+  + A RAIREL N+ L GRPIFVREDRE         XXXXXXXXXXXXXXXXXXXXX                  S  G QLYVGNLS+ T W DLKDHF   G V+RA+V      R KG+G +RF T  +A  AI+ LNG E   R++EVR DNK
Sbjct:   87 LATKRLYVGNLSWSVSWRELKDHMKSAGDVTRADILQTPDGRSKGCGIVEFATAEEASNAVETLNDSELMGRQIFVREDREAE------------------------KAADASSKRVYVGNLAYEVAWQDLKDHMRDAG-EVQFAEVMMMNDGRSKGCGIVEFADEEGAQNAIDTLNDTELCGRQIFVREDREQKVSGGGHHGQHXXXXXXXXXLNRVGXGAXXXXGRYNNQ-------------LGNV-----------------NVYVGNLAYETTWQELKDHMRRVGNIDKADILQGNDGRSKGCGIVIYQSPKEAQRAIRELQNSELNGRPIFVREDRESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTSGNLMPGAPSEQGCQLYVGNLSWGTGWRDLKDHFGQCGGVDRAEVAEGPDGRKKGFGVIRFHTAGDAAEAIERLNGGEFMGRKLEVRLDNK 504          
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A448YVD1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVD1_9STRA)

HSP 1 Score: 329 bits (844), Expect = 7.100e-104
Identity = 214/473 (45.24%), Postives = 261/473 (55.18%), Query Frame = 0
Query:   57 RVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDREAAXXXXXXXXN----------QHRNGPGQMSGXXXPRGS--------GNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRE-SGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMGHMQMHQQMQHGGVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSK-GCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXASIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNK 508
            RVYVGNL+WE  WQDLKD M++   EVVR DV++ + GRSKGCGIVE+ TP  A  A+ TL DTEL GR IFVREDRE A        N          ++ N   +  G     G+        G+Q+ RVYVGNL+WDVAW DLKDHM+  G EV+RADV+ +  GRS+GCGIVEF   E A  AI  L +SEL GR IFVREDRE SG+   G                  GQ           +P   GPG            HQ         ++   +YV NL++ V WQ+LKDHMR  G V  A +L   DG +  GCGIV Y+  R A RAIREL  + L GRP+ +RED+    A +G R                           QLYVGNLS++TTW +LK+HF  +GEV RADV    S RSKG+G VRF +PE+AQ AI  L GTEL  R IEVR D++
Sbjct:   63 RVYVGNLAWEVSWQDLKDLMKTLDHEVVRVDVLQTSDGRSKGCGIVEFATPEGAAEAVLTLNDTELSGRRIFVREDREQASGRETGHNNYPYSSSRAGGRYGNPRSRYGGPAIHHGNHQGVSSDPGSQSRRVYVGNLSWDVAWADLKDHMKQAG-EVVRADVICEHNGRSKGCGIVEFETEEGARNAIATLTHSELLGRTIFVREDREGSGSEAKG------------------GQ-----------RPKRNGPGAF----------HQ---------SSNKSVYVWNLSYDVSWQDLKDHMRRAGNVDQATILTGSDGSTSIGCGIVVYQSARDAARAIRELQESDLKGRPVRLREDK---IAGRGPRPARGPRSGSDEPRAPPGVVT-------QLYVGNLSYDTTWRELKEHFLQAGEVVRADVKASDSGRSKGFGIVRFASPEDAQNAIATLAGTELDGRPIEVRPDHR 476          
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A7S4AB42_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AB42_9STRA)

HSP 1 Score: 329 bits (843), Expect = 1.880e-103
Identity = 228/478 (47.70%), Postives = 279/478 (58.37%), Query Frame = 0
Query:   57 RVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDRE-----------AAXXXXXXXXNQHRNGPG-QMSGXXXPRGSG------NQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRE-SGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMGHMQMHQQMQHGGVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSK-GCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXA-----SIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNK 508
            RVYVGNL+WE  WQDLKD M++   EVVR DVM+ + GRSKGC IVE+ T   A  A+ TL DTEL GR IFVREDRE           +A        NQ     G   SG      S       +Q+ RVYVGNL+WDV W DLKDHM+T+G +V+RADV+ +  GRS+GCGIVEF   E A +AIE L ++EL+GRMIFVREDRE SG+ G G                                              GH             Q + N +YV NL++ V WQ+LKDHMR  G V  A +L   DG +  GCGIV Y+  R A RAIREL  + L GRP+ +RED+  ++  +  RXXXXXXXXXXXXXXXXXXXXX      +    QLYVGNLS++TTW +LK+HF  +GEV RADV    + RSKG+G V+F  PE+AQTAI  L+G EL  R +EVR D+K
Sbjct:   67 RVYVGNLAWEISWQDLKDLMKTLNHEVVRVDVMQTSDGRSKGCAIVEFATSEGAAEAVLTLNDTELSGRRIFVREDREKSNIGAGGRDFSARGGRYSNNNQRNRHHGTNQSGSNYNHNSTVSSNPESQSRRVYVGNLSWDVTWSDLKDHMKTVG-DVVRADVICEHNGRSKGCGIVEFETEEGAQEAIETLTHTELRGRMIFVREDREGSGSEGKG----------------------------------------------GHALRRIGAGSANPNQTSNNSVYVWNLSYDVSWQDLKDHMRKAGNVDQATILTGNDGSTSIGCGIVVYQSARDAARAIRELQESDLKGRPVRLREDKIASAGSRSDRXXXXXXXXXXXXXXXXXXXXXGHGDEPASELTQLYVGNLSYDTTWKELKEHFNQAGEVARADVKTSDNGRSKGFGIVKFARPEDAQTAISTLSGVELDGRALEVRPDHK 497          
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A1E7F6P9_9STRA (RRM_1-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F6P9_9STRA)

HSP 1 Score: 311 bits (796), Expect = 3.410e-96
Identity = 223/486 (45.88%), Postives = 272/486 (55.97%), Query Frame = 0
Query:   57 RVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDRE-------AAXXXXXXXXNQHRN------------GPGQMSGXXXPRGSGNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRESGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMGHMQMHQQMQHGGVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXASIA--------------GRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNK 508
            RVYVGNL+WE  WQDLKD M++   EVVR DVM+ + GRSKGCGIVE+ T   A  AI TL DTEL GR IFVREDRE       ++        +++RN                   X       +Q+ RVYVGNL+WDV+W +LKDHM+T G EV+RADV+++  GRS+GCGIVE+A  ++A QAI  L ++EL+GR IFVREDRE G       XXXXX                   G+                                     N +YV NL++ V WQ+LKDHMR  G V  A VL   DG S GCGIV ++  R A RAIREL  + L GRP+ +REDR   +   G  XXXXXXXXXXXXXXXXXXX                    G QLYVGNLS+ TTW DLK+HF  +GE+ RADV    S RSKG+G VRF   ++A+ AI  L G EL  R +EVR D+K
Sbjct:   70 RVYVGNLAWEVSWQDLKDLMKTTNHEVVRCDVMQTSDGRSKGCGIVEFATNEGAAEAILTLNDTELSGRSIFVREDRETSNSGGTSSNPREHSSRDRNRNRHXXXXXXXXXXXXXXXXXXTVSSNPESQSCRVYVGNLSWDVSWPELKDHMKTAG-EVVRADVISEHNGRSKGCGIVEYATEDEAQQAIATLTHTELQGRTIFVREDRERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGS-------------------------------------NSVYVWNLSYDVSWQDLKDHMRKAGNVDQATVLTGNDGTSIGCGIVVFQSARDAQRAIRELQESDLNGRPVRLREDRVSGTGGGGXXXXXXXXXXXXXXXXXXXXXRTRGGGRNFSQPDNEDPVPEGTQLYVGNLSYSTTWRDLKNHFSQAGEIVRADVKTSDSGRSKGFGIVRFTRSDDAEAAISSLGGIELDGRSLEVRLDHK 517          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGN3_ECTSI3.560e-23977.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8N0_9PHAE1.510e-18182.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3Q3W4_9STRA4.880e-11047.05Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4IUY5_9STRA1.200e-10951.63Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S2W0R0_9STRA1.290e-10950.43Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1BM28_9STRA4.800e-10946.37Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2KX18_9STRA2.700e-10849.26Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A448YVD1_9STRA7.100e-10445.24Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4AB42_9STRA1.880e-10347.70Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1E7F6P9_9STRA3.410e-9645.88RRM_1-domain-containing protein n=1 Tax=Fragilario... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 319..391
e-value: 2.2E-22
score: 90.3
coord: 57..129
e-value: 2.6E-20
score: 83.5
coord: 168..241
e-value: 8.5E-23
score: 91.7
coord: 432..504
e-value: 2.6E-24
score: 96.8
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 433..501
e-value: 1.6E-20
score: 72.7
coord: 58..125
e-value: 1.6E-16
score: 59.9
coord: 320..388
e-value: 8.2E-19
score: 67.2
coord: 169..237
e-value: 2.2E-18
score: 65.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 56..133
score: 15.443
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 167..245
score: 16.551
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 318..395
score: 16.244
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 431..508
score: 18.172
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 312..421
e-value: 1.5E-24
score: 88.6
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 428..512
e-value: 5.3E-26
score: 92.5
coord: 163..248
e-value: 3.1E-26
score: 93.2
coord: 53..135
e-value: 2.4E-23
score: 84.0
NoneNo IPR availablePANTHERPTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINcoord: 38..133
coord: 164..397
coord: 307..513
coord: 56..245
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 430..511
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 52..163
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 165..259
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 306..425

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3796contigH-paniculata_contig3796:5304..16054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3796.9955.1mRNA_H-paniculata_contig3796.9955.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3796 5139..17226 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3796.9955.1 ID=prot_H-paniculata_contig3796.9955.1|Name=mRNA_H-paniculata_contig3796.9955.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=540bp
MSGMVKGMVENGMGYVEQAPSPFVPDGVVPVNVGGVPGAMPMGPGSVGGG
TPIAITRVYVGNLSWETEWQDLKDHMRSAGEVVRADVMRDASGRSKGCGI
VEYRTPMEAQTAINTLLDTELKGRLIFVREDREAAGGGGGGGGNQHRNGP
GQMSGGGGPRGSGNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVM
TDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRESGTPG
MGHGGHGGHPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMGH
MQMHQQMQHGGVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVL
QDGDGRSKGCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASAR
QGRRGGGGAGGNHQQSNGGGSGGGGASIAGRQLYVGNLSFETTWADLKDH
FRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQ
IEVREDNKTIPNANNAHANSGANASPAAAPSPAPVISTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf