mRNA_H-paniculata_contig3796.9955.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: D8LGN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGN3_ECTSI) HSP 1 Score: 678 bits (1749), Expect = 9.460e-233 Identity = 421/544 (77.39%), Postives = 437/544 (80.33%), Query Frame = 1
Query: 190 VENGMGYVEQAPSPFVPD--GVVPVNVGGVPGAMPMGPGSVGG--GTPIA-----ITRVYVGNLSWETEWQDLKDHMRSAGEVVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDREAAXXXXXXXXNQHRNGPGQMSGXXXPRGSGNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRESGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMG----HMQMHQQMQH---------GGVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXASIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNKT--------IPNANNAHANSGA 1731
+ENGMGYVEQ P+ + D GVV V G+ G MP+ VGG P+ ITRVYVGNLSWETEWQDLKDHMR+AGEVVRADVMRDASGRSKGCGIVEYRTP EAQ AINTLLDTELKGRLIFVREDREAAXXXXXXXX GP RGSGNQNARVYVGNLAWDVAWQDLKDHMR LGGEVIRADVMTDQGGRSRGCGIVE+A EQA QAIEQLNNSELK RMIFVREDRESGTPG XXXXX MVGQMQM PMGAF GQPFA GPG LMGQ MG MQMHQ G +PQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYED RGANRAIRELNNTALGGRPIFVREDREQ + RQ XXXXXXXXXXXXXXXXXXXXX ++AGRQLYVGNLSFETTWADLKDHFRT+GEVERADVMMD SRRSKGWGTVRFRT EEAQ+AIQELNGTELGSRQIEVRED+KT P A NA A + A
Sbjct: 1 MENGMGYVEQ-PAQYAQDANGVV---VNGMGGVMPV----VGGMSAPPVGVMTTGITRVYVGNLSWETEWQDLKDHMRTAGEVVRADVMRDASGRSKGCGIVEYRTPAEAQEAINTLLDTELKGRLIFVREDREAAXXXXXXXXXXMXXGP---------RGSGNQNARVYVGNLAWDVAWQDLKDHMRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAIEQLNNSELKNRMIFVREDRESGTPGXXXXXXXXXXXXXXXXX-MVGQMQMGPMGAFGGQPFAAGPGALMGQSMGGHMQQMQMHQXXXXXXXXXXXXXGAMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTALGGRPIFVREDREQQNPRQXX-XXXXXXXXXXXXXXXXXXXXXENLAGRQLYVGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKGWGTVRFRTQEEAQSAIQELNGTELGSRQIEVREDSKTGGXXXXXSYPKAGNAKAGATA 525
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A6H5J8N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8N0_9PHAE) HSP 1 Score: 525 bits (1353), Expect = 2.260e-175 Identity = 310/377 (82.23%), Postives = 319/377 (84.62%), Query Frame = 1
Query: 640 PRGSGNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRESGTPGMGHGXXXXXPQQFNQQQQ-MVGQMQMPPMGAFAGQPFAPGPGPLMGQPMG----HMQMHQQMQHG------GVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXASIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNKT------IPNANNAHA 1719
PRGSGNQNARVYVGNLAWDVAWQDLKDHMR LGGEVIRADVMTDQGGRSRGCGIVE+A EQA QAIEQLNNSELK RMIFVREDRESGTPG GH XXXXX MVGQMQM PMGAF GQPFA GPG LMGQ MG MQMHQ +PQATGNRIYVGNLAWTVEWQELKDHMRTVGKV+HADVLQDGDGRSKGCGIVEYED RGANRAIRELNNTALGGRPIFVREDREQ + RQ XXXXXXXXXXXXXXXXXXXXX ++AGRQLYVGNLSFETTWADLKDHFRT+GEVERADVMMD SRRSKGWGTVRFRT EEAQ+AIQELNGTELGSRQIEVRED+KT P A NA A
Sbjct: 5 PRGSGNQNARVYVGNLAWDVAWQDLKDHMRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAIEQLNNSELKNRMIFVREDRESGTPGSGHXXXXXXXXXXXXXXXXMVGQMQMGPMGAFGGQPFAAGPGALMGQSMGGHMQQMQMHQXXXXXXXXXXXAMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVLHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTALGGRPIFVREDREQQNPRQXXXXXXXXXXXXXXXXXXXXXXXXENLAGRQLYVGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKGWGTVRFRTQEEAQSAIQELNGTELGSRQIEVREDSKTGGGGGSYPKAGNAKA 381
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A7S3Q3W4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3W4_9STRA) HSP 1 Score: 345 bits (885), Expect = 3.830e-105 Identity = 215/457 (47.05%), Postives = 266/457 (58.21%), Query Frame = 1
Query: 334 RVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDREAAXXXXXXXXNQHRNGPGQMSGXXXPRGSGNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRESGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMGHMQMHQQMQHGGVPQATGNR----IYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXASIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNK 1689
RVYVGNL+WE W++LKDHM+ AG EV RADV+ GRSKGCGIVE+ + AQ A+ L DT+L GR IFVREDRE+ Q P + Q+ RVYVGNL+W+VAWQDLKD+MR+ G EV+ ++VMT+ GRS+GCGIVE+A E+A A L+++ELK RMIFVREDRE+ + GG Q GNR +YVGNLA+ WQ+LKDHMR G V A+VLQ DG SKGCGIV Y++ R ++RAIREL + L GRPIFVREDREQ XXXXXXXX XX X + G QL+VGNLSF+T W +LKDHFR G+VER +V+ R KG+GTVRF ++A AI+ LNG EL R+++VR DNK
Sbjct: 84 RVYVGNLAWEVTWKELKDHMKEAGCEVTRADVLASPDGRSKGCGIVEFASAEGAQRAL-LLNDTDLAGRQIFVREDRESGNGGGYY--TQQPGNPASATSGGNDASEEKQSCRVYVGNLSWEVAWQDLKDYMRSAG-EVVYSEVMTNADGRSKGCGIVEYATPEEAKNACTTLSDTELKDRMIFVREDRETSS-------------------------------------------------------------GGGNQQGGNRGSTSVYVGNLAYETSWQDLKDHMRAAGNVDQANVLQQEDGTSKGCGIVVYQNARDSSRAIRELQESVLHGRPIFVREDREQGGXXXXXXXXXXXXXXFXXRXRGGHQRKPVT-PGTQLFVGNLSFDTNWTELKDHFRQCGDVERVEVIEGHDGRKKGFGTVRFYNAKDAANAIERLNGVELQGRELQVRVDNK 474
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A7S4IUY5_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IUY5_9STRA) HSP 1 Score: 345 bits (886), Expect = 9.500e-105 Identity = 237/459 (51.63%), Postives = 277/459 (60.35%), Query Frame = 1
Query: 334 RVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDREAAXXXXXXXXNQHRNGPGQMSGXXXPR------GSGNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRESGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMGHMQMHQQMQHGGVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXASIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNK 1689
RVYVGNLSWET W++LKDHM++ G EV RADV+ GRSKGCGI+E+ T AQ A+ TL DTEL GR IFVREDRE XXXXXX XXX G Q RVYVGNL+WDVA QDLKDHMR G EV+ A+VM + GRS+GCGIVEFA A +A +AI L ++ELKGRMIFVREDRE+ XXX G F G+ +YVGNLA+ WQ+LKDHMR G V A++LQ DGRSKGCGIV Y+ + A+RAIREL NT L GRPIFVREDREQ S XXXXXXXXXXXXXX AG QL+VGNLS++T+W +LKDHFR G+VERA+VM +S+G+GTVRF +A AIQ LNG EL R +EV+ D K
Sbjct: 113 RVYVGNLSWETTWRELKDHMKTTGCEVTRADVLCSPDGRSKGCGIIEFETAEGAQRAVLTLNDTELMGRQIFVREDREEGSGXXXXXXXXXXXXXXXXXXXXXXXXXRYASGGDAQTRRVYVGNLSWDVALQDLKDHMRNAG-EVVFAEVMKEHDGRSKGCGIVEFATAAEAEEAISTLTDTELKGRMIFVREDRETTXXXXXXXXXXAV------------------FGGFQGRXXX----------------------------XXTSVYVGNLAYETSWQDLKDHMRKAGNVDQANILQGEDGRSKGCGIVRYQRPQEASRAIRELQNTMLTGRPIFVREDREQGS---------HHXXXXXXXXXXXXXXHSRVAAGCQLWVGNLSWDTSWRELKDHFRQCGDVERAEVMEGPDGQSRGFGTVRFYRQRDAANAIQRLNGVELQGRVLEVKIDGK 515
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A7S2W0R0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W0R0_9STRA) HSP 1 Score: 345 bits (885), Expect = 1.010e-104 Identity = 236/468 (50.43%), Postives = 279/468 (59.62%), Query Frame = 1
Query: 334 RVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDREAAXXXXXXXXNQHRNGPGQMSGXXXPR-------GSGNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRESGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMGHMQMHQQMQHGGVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXA--------SIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNK 1689
RVYVGNLSW+ W+DLKD M+S G EV RADV+ GRSKGCGIVE+ T A+ A+ TL DTELKGR IFVREDRE+ Q G S P G +Q RVYVGNL+WDVAWQDLKDHMR G EV A+VM + GRS+GCGIVEFA AE+A AIE L +SELKGRMIFVREDRES + G G G F Q G +T ++VGNL++ WQ+LKDHMR G V A+VL DGRSKGCGIV+Y+ + A+RA+REL N+ L GRPIF REDREQ A R XXXXXXXXXXXXXXXXXXX S G QL+VGNLS +TTW DLKDHFR G+VERA+V+ +RS +GT+RF ++A AI L+G E ++EVR DN+
Sbjct: 98 RVYVGNLSWDVSWRDLKDWMQSTGCEVSRADVLASPDGRSKGCGIVEFATAEMAEKAVETLNDTELKGRAIFVREDRES--NSSSGYYTQQTEGESAPSPSASPAEADSCASGGESQGRRVYVGNLSWDVAWQDLKDHMRQAG-EVSFAEVMNESDGRSKGCGIVEFATAEEAKDAIETLTDSELKGRMIFVREDRESTSSGGG--------------------------GNF--------------------------QSGSKEGSTS--VFVGNLSYETSWQDLKDHMRQAGNVDEANVLSMDDGRSKGCGIVQYQRAQDADRAVRELQNSILQGRPIFCREDREQPGAAPSRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXSNSGGGSQLFVGNLSADTTWKDLKDHFRQCGDVERAEVV--EGKRST-FGTIRFFKEKDALDAISNLDGVEFQGHELEVRNDNR 505
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A7S1BM28_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BM28_9STRA) HSP 1 Score: 340 bits (872), Expect = 3.320e-104 Identity = 211/455 (46.37%), Postives = 251/455 (55.16%), Query Frame = 1
Query: 334 RVYVGNLSWETEWQDLKDHMRSAGE---VVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDREAAXXXXXXXXNQHRNGPGQMSGXXXPRGSGNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRESGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMGHMQMHQQMQHGGVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXASIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNK 1689
RVYVGNL+WE WQDLKDHMR GE V RADVM+ GRSKGCG+VE+ T A+ A+ + DTEL GR IFVREDREAA PG G RVYVGNL+W+V WQDLKDHMR G +V A+VMT GRS+GCGIVE+A AEQA +AI LN+++L GRMIFVREDRE G G + +YVGNLA+ WQ+LKDHMR G V AD+L DGRSKGC IV Y+ + A RAIREL N+ L GRPIFVREDREQ R XXXXXXX QL+VGNLS++TTW +LKDHF+ GEV+R +VM R KG+GTV F ++A +AI+ +NG EL R +EV+ D K
Sbjct: 3 RVYVGNLAWEATWQDLKDHMRGLGEGCEVTRADVMQTHDGRSKGCGLVEFATAEGARRAVLMMNDTELHGRQIFVREDREAAAALPA---------PGATGGRAVDAAEAGSR-RVYVGNLSWEVVWQDLKDHMRQAG-DVQFAEVMTGGDGRSKGCGIVEYATAEQAQEAISTLNDTDLNGRMIFVREDREVG-------------------------------------------GXXXXXXXXXXXXXXXXXXXXXXXSNACSVYVGNLAFETPWQDLKDHMRAAGNVDKADILTGEDGRSKGCAIVIYQKPQEAARAIRELQNSVLQGRPIFVREDREQGGGRXXXXXXXXXXXRSAGYDGDYDRMPVDDGTATQLFVGNLSYDTTWEELKDHFKQCGEVDRVEVMEGPDGRKKGYGTVSFFKAKDASSAIRRMNGVELAGRPLEVKVDAK 403
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A7S2KX18_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KX18_9STRA) HSP 1 Score: 342 bits (876), Expect = 1.950e-103 Identity = 233/473 (49.26%), Postives = 276/473 (58.35%), Query Frame = 1
Query: 322 IAITRVYVGNLSWETEWQDLKDHMRSAGEVVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDREAAXXXXXXXXNQHRNGPGQMSGXXXPRGSGNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRESGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMGHMQMHQQMQHGGVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXA-----------------SIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNK 1689
+A R+YVGNLSW W++LKDHM+SAG+V RAD+++ GRSKGCGIVE+ T EA A+ TL D+EL GR IFVREDREA + + + RVYVGNLA++VAWQDLKDHMR G EV A+VM GRS+GCGIVEFA+ E A AI+ LN++EL GR IFVREDRE G GH XX VG G + Q +G++ +YVGNLA+ WQELKDHMR VG + AD+LQ DGRSKGCGIV Y+ + A RAIREL N+ L GRPIFVREDRE XXXXXXXXXXXXXXXXXXXXX S G QLYVGNLS+ T W DLKDHF G V+RA+V R KG+G +RF T +A AI+ LNG E R++EVR DNK
Sbjct: 87 LATKRLYVGNLSWSVSWRELKDHMKSAGDVTRADILQTPDGRSKGCGIVEFATAEEASNAVETLNDSELMGRQIFVREDREAE------------------------KAADASSKRVYVGNLAYEVAWQDLKDHMRDAG-EVQFAEVMMMNDGRSKGCGIVEFADEEGAQNAIDTLNDTELCGRQIFVREDREQKVSGGGHHGQHXXXXXXXXXLNRVGXGAXXXXGRYNNQ-------------LGNV-----------------NVYVGNLAYETTWQELKDHMRRVGNIDKADILQGNDGRSKGCGIVIYQSPKEAQRAIRELQNSELNGRPIFVREDRESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTSGNLMPGAPSEQGCQLYVGNLSWGTGWRDLKDHFGQCGGVDRAEVAEGPDGRKKGFGVIRFHTAGDAAEAIERLNGGEFMGRKLEVRLDNK 504
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A448YVD1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVD1_9STRA) HSP 1 Score: 329 bits (844), Expect = 3.710e-99 Identity = 214/473 (45.24%), Postives = 261/473 (55.18%), Query Frame = 1
Query: 334 RVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDREAAXXXXXXXXN----------QHRNGPGQMSGXXXPRGS--------GNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRE-SGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMGHMQMHQQMQHGGVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSK-GCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXASIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNK 1689
RVYVGNL+WE WQDLKD M++ EVVR DV++ + GRSKGCGIVE+ TP A A+ TL DTEL GR IFVREDRE A N ++ N + G G+ G+Q+ RVYVGNL+WDVAW DLKDHM+ G EV+RADV+ + GRS+GCGIVEF E A AI L +SEL GR IFVREDRE SG+ G GQ +P GPG HQ ++ +YV NL++ V WQ+LKDHMR G V A +L DG + GCGIV Y+ R A RAIREL + L GRP+ +RED+ A +G R QLYVGNLS++TTW +LK+HF +GEV RADV S RSKG+G VRF +PE+AQ AI L GTEL R IEVR D++
Sbjct: 63 RVYVGNLAWEVSWQDLKDLMKTLDHEVVRVDVLQTSDGRSKGCGIVEFATPEGAAEAVLTLNDTELSGRRIFVREDREQASGRETGHNNYPYSSSRAGGRYGNPRSRYGGPAIHHGNHQGVSSDPGSQSRRVYVGNLSWDVAWADLKDHMKQAG-EVVRADVICEHNGRSKGCGIVEFETEEGARNAIATLTHSELLGRTIFVREDREGSGSEAKG------------------GQ-----------RPKRNGPGAF----------HQ---------SSNKSVYVWNLSYDVSWQDLKDHMRRAGNVDQATILTGSDGSTSIGCGIVVYQSARDAARAIRELQESDLKGRPVRLREDK---IAGRGPRPARGPRSGSDEPRAPPGVVT-------QLYVGNLSYDTTWRELKEHFLQAGEVVRADVKASDSGRSKGFGIVRFASPEDAQNAIATLAGTELDGRPIEVRPDHR 476
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A7S4AB42_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AB42_9STRA) HSP 1 Score: 329 bits (843), Expect = 9.700e-99 Identity = 228/478 (47.70%), Postives = 279/478 (58.37%), Query Frame = 1
Query: 334 RVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDRE-----------AAXXXXXXXXNQHRNGPG-QMSGXXXPRGSG------NQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRE-SGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMGHMQMHQQMQHGGVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSK-GCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXA-----SIAGRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNK 1689
RVYVGNL+WE WQDLKD M++ EVVR DVM+ + GRSKGC IVE+ T A A+ TL DTEL GR IFVREDRE +A NQ G SG S +Q+ RVYVGNL+WDV W DLKDHM+T+G +V+RADV+ + GRS+GCGIVEF E A +AIE L ++EL+GRMIFVREDRE SG+ G G GH Q + N +YV NL++ V WQ+LKDHMR G V A +L DG + GCGIV Y+ R A RAIREL + L GRP+ +RED+ ++ + RXXXXXXXXXXXXXXXXXXXXX + QLYVGNLS++TTW +LK+HF +GEV RADV + RSKG+G V+F PE+AQTAI L+G EL R +EVR D+K
Sbjct: 67 RVYVGNLAWEISWQDLKDLMKTLNHEVVRVDVMQTSDGRSKGCAIVEFATSEGAAEAVLTLNDTELSGRRIFVREDREKSNIGAGGRDFSARGGRYSNNNQRNRHHGTNQSGSNYNHNSTVSSNPESQSRRVYVGNLSWDVTWSDLKDHMKTVG-DVVRADVICEHNGRSKGCGIVEFETEEGAQEAIETLTHTELRGRMIFVREDREGSGSEGKG----------------------------------------------GHALRRIGAGSANPNQTSNNSVYVWNLSYDVSWQDLKDHMRKAGNVDQATILTGNDGSTSIGCGIVVYQSARDAARAIRELQESDLKGRPVRLREDKIASAGSRSDRXXXXXXXXXXXXXXXXXXXXXGHGDEPASELTQLYVGNLSYDTTWKELKEHFNQAGEVARADVKTSDNGRSKGFGIVKFARPEDAQTAISTLSGVELDGRALEVRPDHK 497
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Match: A0A1E7F6P9_9STRA (RRM_1-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F6P9_9STRA) HSP 1 Score: 311 bits (796), Expect = 1.050e-91 Identity = 223/486 (45.88%), Postives = 272/486 (55.97%), Query Frame = 1
Query: 334 RVYVGNLSWETEWQDLKDHMRSAG-EVVRADVMRDASGRSKGCGIVEYRTPMEAQTAINTLLDTELKGRLIFVREDRE-------AAXXXXXXXXNQHRN------------GPGQMSGXXXPRGSGNQNARVYVGNLAWDVAWQDLKDHMRTLGGEVIRADVMTDQGGRSRGCGIVEFANAEQAAQAIEQLNNSELKGRMIFVREDRESGTPGMGHGXXXXXPQQFNQQQQMVGQMQMPPMGAFAGQPFAPGPGPLMGQPMGHMQMHQQMQHGGVPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDTRGANRAIRELNNTALGGRPIFVREDREQASARQGRRXXXXXXXXXXXXXXXXXXXXXASIA--------------GRQLYVGNLSFETTWADLKDHFRTSGEVERADVMMDSSRRSKGWGTVRFRTPEEAQTAIQELNGTELGSRQIEVREDNK 1689
RVYVGNL+WE WQDLKD M++ EVVR DVM+ + GRSKGCGIVE+ T A AI TL DTEL GR IFVREDRE ++ +++RN X +Q+ RVYVGNL+WDV+W +LKDHM+T G EV+RADV+++ GRS+GCGIVE+A ++A QAI L ++EL+GR IFVREDRE G XXXXX G+ N +YV NL++ V WQ+LKDHMR G V A VL DG S GCGIV ++ R A RAIREL + L GRP+ +REDR + G XXXXXXXXXXXXXXXXXXX G QLYVGNLS+ TTW DLK+HF +GE+ RADV S RSKG+G VRF ++A+ AI L G EL R +EVR D+K
Sbjct: 70 RVYVGNLAWEVSWQDLKDLMKTTNHEVVRCDVMQTSDGRSKGCGIVEFATNEGAAEAILTLNDTELSGRSIFVREDRETSNSGGTSSNPREHSSRDRNRNRHXXXXXXXXXXXXXXXXXXTVSSNPESQSCRVYVGNLSWDVSWPELKDHMKTAG-EVVRADVISEHNGRSKGCGIVEYATEDEAQQAIATLTHTELQGRTIFVREDRERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGS-------------------------------------NSVYVWNLSYDVSWQDLKDHMRKAGNVDQATVLTGNDGTSIGCGIVVFQSARDAQRAIRELQESDLNGRPVRLREDRVSGTGGGGXXXXXXXXXXXXXXXXXXXXXRTRGGGRNFSQPDNEDPVPEGTQLYVGNLSYSTTWRDLKNHFSQAGEIVRADVKTSDSGRSKGFGIVRFTRSDDAEAAISSLGGIELDGRSLEVRLDHK 517 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3796.9955.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3796.9955.1 >prot_H-paniculata_contig3796.9955.1 ID=prot_H-paniculata_contig3796.9955.1|Name=mRNA_H-paniculata_contig3796.9955.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=540bp MSGMVKGMVENGMGYVEQAPSPFVPDGVVPVNVGGVPGAMPMGPGSVGGGback to top mRNA from alignment at H-paniculata_contig3796:5139..17226+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3796.9955.1 ID=mRNA_H-paniculata_contig3796.9955.1|Name=mRNA_H-paniculata_contig3796.9955.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12088bp|location=Sequence derived from alignment at H-paniculata_contig3796:5139..17226+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3796:5139..17226+ >mRNA_H-paniculata_contig3796.9955.1 ID=mRNA_H-paniculata_contig3796.9955.1|Name=mRNA_H-paniculata_contig3796.9955.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3240bp|location=Sequence derived from alignment at H-paniculata_contig3796:5139..17226+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |