mRNA_H-paniculata_contig34848.9291.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig34848.9291.1 vs. uniprot
Match: D7FUH7_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH7_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 1.540e-18 Identity = 39/58 (67.24%), Postives = 48/58 (82.76%), Query Frame = 1
Query: 4 YDPRVRPWYVTSSSGPKDVVIILDISSSMRQKGRLDLAIDAVERVLDTMNEHTFVNVV 177
YDPR+RPWYV +SSGPKDVVI+LD+S SM Q GRLDLA +A E V++T+ +FVNVV
Sbjct: 98 YDPRIRPWYVAASSGPKDVVIVLDVSGSMSQYGRLDLAKEAAETVINTLGADSFVNVV 155
BLAST of mRNA_H-paniculata_contig34848.9291.1 vs. uniprot
Match: A0A7S3LU80_9EUKA (Hypothetical protein n=5 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3LU80_9EUKA) HSP 1 Score: 75.5 bits (184), Expect = 1.660e-14 Identity = 32/59 (54.24%), Postives = 47/59 (79.66%), Query Frame = 1
Query: 1 DYDPRVRPWYVTSSSGPKDVVIILDISSSMRQKGRLDLAIDAVERVLDTMNEHTFVNVV 177
DYDPR+RPW+V +SSGPKD+VI++D S SM Q GR+D AI+A + V+ T + + +++VV
Sbjct: 235 DYDPRIRPWFVLASSGPKDIVILIDKSGSMGQYGRMDKAIEAAQAVISTSSANDYISVV 293
BLAST of mRNA_H-paniculata_contig34848.9291.1 vs. uniprot
Match: A0A7S3LUB0_9EUKA (Hypothetical protein n=4 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3LUB0_9EUKA) HSP 1 Score: 75.5 bits (184), Expect = 1.660e-14 Identity = 32/59 (54.24%), Postives = 47/59 (79.66%), Query Frame = 1
Query: 1 DYDPRVRPWYVTSSSGPKDVVIILDISSSMRQKGRLDLAIDAVERVLDTMNEHTFVNVV 177
DYDPR+RPW+V +SSGPKD+VI++D S SM Q GR+D AI+A + V+ T + + +++VV
Sbjct: 235 DYDPRIRPWFVLASSGPKDIVILIDKSGSMGQYGRMDKAIEAAQAVISTSSANDYISVV 293
BLAST of mRNA_H-paniculata_contig34848.9291.1 vs. uniprot
Match: A0A7S1C8J8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8J8_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.860e-13 Identity = 32/59 (54.24%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 1 DYDPRVRPWYVTSSSGPKDVVIILDISSSMRQKGRLDLAIDAVERVLDTMNEHTFVNVV 177
DYDPR RPWYV +SSGPK+V+++LD+S SM K R +A DA + VL+T+ + FV+V+
Sbjct: 111 DYDPRFRPWYVGASSGPKNVILVLDMSGSMALKNRAKIARDAAKSVLETLTVNDFVSVI 169
BLAST of mRNA_H-paniculata_contig34848.9291.1 vs. uniprot
Match: A0A7M7NN62_STRPU (VWFA domain-containing protein n=3 Tax=Echinacea TaxID=7674 RepID=A0A7M7NN62_STRPU) HSP 1 Score: 71.6 bits (174), Expect = 3.760e-13 Identity = 32/59 (54.24%), Postives = 46/59 (77.97%), Query Frame = 1
Query: 1 DYDPRVRPWYVTSSSGPKDVVIILDISSSMRQKGRLDLAIDAVERVLDTMNEHTFVNVV 177
DYDPRVRPWY+ ++SGPKDVVIILD S SM+ + + +A + V+ VLDT+ + +VN++
Sbjct: 243 DYDPRVRPWYIAATSGPKDVVIILDCSYSMKGE-KFKIATEVVKTVLDTLTKQDYVNII 300
BLAST of mRNA_H-paniculata_contig34848.9291.1 vs. uniprot
Match: A0A8B7YHQ9_ACAPL (voltage-dependent calcium channel subunit alpha-2/delta-3-like n=2 Tax=Valvatida TaxID=41166 RepID=A0A8B7YHQ9_ACAPL) HSP 1 Score: 71.6 bits (174), Expect = 3.760e-13 Identity = 31/59 (52.54%), Postives = 46/59 (77.97%), Query Frame = 1
Query: 1 DYDPRVRPWYVTSSSGPKDVVIILDISSSMRQKGRLDLAIDAVERVLDTMNEHTFVNVV 177
DYDPRVRPWY+T +S PKDVVI++D S+SM+ K + ++A+ V +LDT+ + +VNV+
Sbjct: 245 DYDPRVRPWYITGTSDPKDVVIMIDCSTSMQGK-KFEIAVSVVRIILDTLTKQDYVNVI 302
BLAST of mRNA_H-paniculata_contig34848.9291.1 vs. uniprot
Match: A0A7S2LVG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LVG3_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 7.840e-13 Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 1
Query: 1 DYDPRVRPWYVTSSSGPKDVVIILDISSSMRQKGRLDLAIDAVERVLDTM 150
+YDPR RPW+V +SSGPKDV+I+LD+S SM G++DLA A V+DT+
Sbjct: 39 NYDPRKRPWFVAASSGPKDVIIVLDVSGSMSNYGKMDLAKKAAITVVDTL 88
BLAST of mRNA_H-paniculata_contig34848.9291.1 vs. uniprot
Match: A0A6P8HPB9_ACTTE (voltage-dependent calcium channel subunit alpha-2/delta-1-like n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HPB9_ACTTE) HSP 1 Score: 70.5 bits (171), Expect = 9.590e-13 Identity = 32/59 (54.24%), Postives = 46/59 (77.97%), Query Frame = 1
Query: 1 DYDPRVRPWYVTSSSGPKDVVIILDISSSMRQKGRLDLAIDAVERVLDTMNEHTFVNVV 177
DYDPR+RPWY+ ++SGPKD+VI+LD S SM+ K RL +A + + VL+T+ + FVNV+
Sbjct: 228 DYDPRMRPWYIGATSGPKDIVIVLDCSLSMKGK-RLTMAKEVAKTVLNTLTKQDFVNVI 285
BLAST of mRNA_H-paniculata_contig34848.9291.1 vs. uniprot
Match: A0A813YD87_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813YD87_9BILA) HSP 1 Score: 70.5 bits (171), Expect = 9.600e-13 Identity = 32/59 (54.24%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 1 DYDPRVRPWYVTSSSGPKDVVIILDISSSMRQKGRLDLAIDAVERVLDTMNEHTFVNVV 177
DYDPRVR WY+ ++SGPKDVVII+D S SM+ K + D+A + V+DT+ H +VNV+
Sbjct: 242 DYDPRVRNWYIAATSGPKDVVIIIDCSLSMKGK-KFDIAKSIAKAVIDTLTSHDYVNVI 299
BLAST of mRNA_H-paniculata_contig34848.9291.1 vs. uniprot
Match: A0A6B2L1C9_9EUKA (VWFA domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L1C9_9EUKA) HSP 1 Score: 70.1 bits (170), Expect = 1.300e-12 Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 1 DYDPRVRPWYVTSSSGPKDVVIILDISSSMRQKGRLDLAIDAVERVLDTMNEHTFVNVV 177
DYDPR RPWY+ +SSGPKDVV+ILD S SM R+ LA A +VL+T+ + ++ VV
Sbjct: 130 DYDPRTRPWYIAASSGPKDVVLILDTSGSMSNFNRISLAKAAATKVLNTLTINDYIGVV 188 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34848.9291.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34848.9291.1 >prot_H-paniculata_contig34848.9291.1 ID=prot_H-paniculata_contig34848.9291.1|Name=mRNA_H-paniculata_contig34848.9291.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=59bp DYDPRVRPWYVTSSSGPKDVVIILDISSSMRQKGRLDLAIDAVERVLDTMback to top mRNA from alignment at H-paniculata_contig34848:1390..1566- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34848.9291.1 ID=mRNA_H-paniculata_contig34848.9291.1|Name=mRNA_H-paniculata_contig34848.9291.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=177bp|location=Sequence derived from alignment at H-paniculata_contig34848:1390..1566- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34848:1390..1566- >mRNA_H-paniculata_contig34848.9291.1 ID=mRNA_H-paniculata_contig34848.9291.1|Name=mRNA_H-paniculata_contig34848.9291.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=354bp|location=Sequence derived from alignment at H-paniculata_contig34848:1390..1566- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |