mRNA_H-paniculata_contig11423.928.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11423.928.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 1.080e-18 Identity = 51/87 (58.62%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 130 LLLVALKEKMPWLESEEVVAEQDGATPHTEKDTPRKLNELERDGGWDFNLETQPAQSPDLNINDLGLFAYLKIRFRRERYGTIDGLV 390 +LL A+KEKMPWL S+ VV +QDGA+PHT K P LN GW L TQPAQSPDLNINDLG FA LK R +ID LV Sbjct: 278 VLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_H-paniculata_contig11423.928.1 vs. uniprot
Match: A0A7S3GU94_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GU94_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.220e-18 Identity = 49/156 (31.41%), Postives = 84/156 (53.85%), Query Frame = 1 Query: 148 KEKMPWLESEEVVAEQDGATPHTEKDTPRKLNELERDGGWDFNLETQPAQSPDLNINDLGLFAYLKIRFRRERYGT--IDGLVEGAKSMYDACDATTLERMWQSLFQRYNQILKALGGNDFEVED----IETKERQRAGSLPQSVDRETFDAAIKW 597 KEKMPW+ + + + DGA PHT +++ GW + Q AQSPDLN+ DLGLF LK++ + + G ID L++ + +Y TL+++W + +I++A+G N ++ + KE A +L S+D + ++AA+ + Sbjct: 4 KEKMPWMRNRRLKIQHDGARPHTAGGLEDEVHATASTEGWHITMVRQRAQSPDLNVMDLGLFHSLKVQVIQLKDGAHNIDELIQKVRVVYQQYSRDTLDQIWGHQVACWTEIMRAMGSNQYKAPHHGGTVSRKEEGSAVNL--SIDADAYNAAVDY 157
BLAST of mRNA_H-paniculata_contig11423.928.1 vs. uniprot
Match: UPI000B778AD2 (uncharacterized protein LOC110722901 n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B778AD2) HSP 1 Score: 81.3 bits (199), Expect = 3.630e-15 Identity = 52/157 (33.12%), Postives = 78/157 (49.68%), Query Frame = 1 Query: 109 TRSSIRTLLLV----ALKEKMPWLESEEVVAEQDGATPHTEKDTPRKLNELERDGGWDFNLETQPAQSPDLNINDLGLFAYLKIRFRRERYGTIDGLVEGAKSMYDACDATTLERMWQSLFQRYNQILKALGGNDFEVEDIETKERQRAGSLPQSVD 567 TR I+ ++L A++ P + + +QD A PH D P L E +DG +D +L QPAQSPDLN+ DLG F ++ +E +++ LVE + Y + D + W +I+K GGN+F+ K QR G LP V+ Sbjct: 53 TRDIIKKMILEEVMPAIRATWPENSCKTIWIQQDNARPHINIDDPEFLEEANKDG-FDMHLICQPAQSPDLNVLDLGFFRAIQAIQHQEFPESVEELVESVLTSYASYDPRIINMTWLHSMYVMEEIMKVKGGNNFKNPHKGKKRLQRLGLLPSYVE 208
BLAST of mRNA_H-paniculata_contig11423.928.1 vs. uniprot
Match: J3S7K7_BETVV (Mariner transposase n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=J3S7K7_BETVV) HSP 1 Score: 82.8 bits (203), Expect = 7.670e-15 Identity = 53/159 (33.33%), Postives = 83/159 (52.20%), Query Frame = 1 Query: 103 SDTRSSIRTL----LLVALKEKMPWLESEEVVAEQDGATPHTEKDTPRKLNELERDGGWDFNLETQPAQSPDLNINDLGLFAYLKIRFRRERYGTIDGLVEGAKSMYDACDATTLERMWQSLFQRYNQILKALGGNDFEVEDIETKERQRAGSLPQSVD 567 S T+ +IR + LL A++ K P +E+ +QD A PH + + L E R+GG++ N+ QPAQSPDLNI DLG F ++ + T+D L++ + Y + + W L +ILK GGN+++ K+ R G LP +V+ Sbjct: 326 SITKETIREMIINKLLPAIRAKWPENGCKEIWIQQDNARPHIQPNDAEFL-EACREGGFEINIICQPAQSPDLNILDLGFFKAIQSIQHQSFPKTVDELIKSVEDAYTVYEPRIINYTWIHLMYVMVEILKVKGGNNYKNPHNSKKKMDRLGLLPTTVE 483
BLAST of mRNA_H-paniculata_contig11423.928.1 vs. uniprot
Match: UPI0005401A41 (uncharacterized protein LOC104884671 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI0005401A41) HSP 1 Score: 78.6 bits (192), Expect = 3.540e-14 Identity = 47/154 (30.52%), Postives = 75/154 (48.70%), Query Frame = 1 Query: 109 TRSSIRTLLLVALKEKMPWLES--EEVVAEQDGATPHTEKDTPRKLNELERDGGWDFNLETQPAQSPDLNINDLGLFAYLKIRFRRERYGTIDGLVEGAKSMYDACDATTLERMWQSLFQRYNQILKALGGNDFEVEDIETKERQRAGSLPQSV 564 T+ + ++ A+K K P + + + +QD A H ++ P ++DG + F L QP SPDLNI DLG F ++ ++ +D ++E Y D L +W SL N+ILK +GGND+++ + K Q G L V Sbjct: 59 TKQMLIEQIIPAIKAKWPQDDGRPKTIFIQQDNAKAHITQEDPEWQQVYQQDG-FTFILLQQPPNSPDLNILDLGFFRSIQSLMHKKMPQDVDKMLEAVHEAYHELDHKKLSNVWYSLQFVMNEILKCVGGNDYDISHVNKKRIQSEGKLEDQV 211
BLAST of mRNA_H-paniculata_contig11423.928.1 vs. uniprot
Match: UPI000901F817 (uncharacterized protein LOC109136021 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI000901F817) HSP 1 Score: 78.6 bits (192), Expect = 6.840e-14 Identity = 51/168 (30.36%), Postives = 81/168 (48.21%), Query Frame = 1 Query: 112 RSSIRTLLLVALKEKMPWLESEEVVAEQDGATPHTEKDTPRKLNELERDGGWDFNLETQPAQSPDLNINDLGLFAYLKIRFRRERYGTIDGLVEGAKSMYDACDATTLERMWQSLFQRYNQILKALGGNDFEVEDIETKERQRAGSLPQSV--DRETFDAAIKWWIDG 609 R + +L+A KEK P +++ QD A PH D + E ++DG +D L QPAQSPD+N+ DLG F ++ + T+ LV+ YD D +W +L Q + L G N++ + + K +R G LP S+ + + + KW +G Sbjct: 89 REKLVNHILLATKEKWPEDGCKQIWTVQDNARPHIASDDAQFNLEAKKDG-FDKRLINQPAQSPDMNVLDLGFFNAIQTLEDQIAPRTVKHLVKAMNKAYDKYDPKLCNHIWLTLQQVMKETLIVKGNNNYHIPHMGKKALERRGELPTSIILSPQLVEESKKWAEEG 255
BLAST of mRNA_H-paniculata_contig11423.928.1 vs. uniprot
Match: A0A7S2FC44_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FC44_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 8.340e-14 Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 190 EQDGATPHTEKDTPRKLNELERDGGWDFNLETQPAQSPDLNINDLGLFAYLKIRFRRERYG-TIDGLVEGAKSMYDACDATTLERMWQSLFQRYNQILKALGGNDFEVEDIETKERQRAG 546 +QDGA PHT +T L + G+D + TQPAQSPDLN+NDLG F LK +++ +++ + Y+ A L+RM+ SL Y +LK G NDF E++ +QR G Sbjct: 35 QQDGAKPHTAAET--WLKGQGKKEGFDLKVTTQPAQSPDLNVNDLGFFRSLKCAATNVAEAFSVEEMIKYIRQAYEEMPADKLDRMFMSLINNYRLLLKHDGDNDFSQEELHLG-KQRKG 151
BLAST of mRNA_H-paniculata_contig11423.928.1 vs. uniprot
Match: UPI000B797FC7 (uncharacterized protein LOC110699849 n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B797FC7) HSP 1 Score: 79.0 bits (193), Expect = 1.100e-13 Identity = 55/157 (35.03%), Postives = 81/157 (51.59%), Query Frame = 1 Query: 112 RSSIRTLLLV----ALKEKMPWLESEEVVAEQDGATPHTEKDTPRKLNELERDGGWDFNLET--QPAQSPDLNINDLGLFAYLKIRFRRERYGTIDGLVEGAKSMYDACDATTLERMWQSLFQRYNQILKALGGNDFEVEDIETKERQRAGSLPQSV 564 R IR +LL A+K K P +++VV + D A PH PR +E FN++ QPAQSPDLN+ DLGLF ++ + +D LV+ K YD D + +W +L +ILKA GGN +++ + K+ + G LP+ V Sbjct: 181 REVIRLMLLTKVIPAIKSKWPESLAKDVVIQWDNARPHQ---VPRDAEFIEATTTNGFNIQFIFQPAQSPDLNVLDLGLFRSIQSLQYQFFPKDLDELVQKVKDSYDTFDPEVNKYIWVTLQNCMIKILKAKGGNKYKIPHMNKKKLENIGILPEIV 334
BLAST of mRNA_H-paniculata_contig11423.928.1 vs. uniprot
Match: UPI00053F8527 (uncharacterized protein LOC104897330 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F8527) HSP 1 Score: 77.4 bits (189), Expect = 5.600e-13 Identity = 50/164 (30.49%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 112 RSSIRTLLLVALKEKMPWLESEEVVAEQDGATPHTEKDTPRKLNELERDGGWDFNLETQPAQSPDLNINDLGLFAYLKIRFRRERYGTIDGLVEGAKSMYDACDATTLERMWQSLFQRYNQILKALGGNDFEVEDIETKERQRAGSLPQSV--DRETFDAAIKW 597 R I ++ A+ P S+E+ +QD A PH P+ + ++G ++ L QPAQSPDLN+ DLG F ++ + +D L+ + YD D L+ W L +ILK GGN+F+ ++ +R G LP++V D+ D A+ + Sbjct: 343 RDMIVNTIIPAIMRNWPEGVSKEIYIQQDNARPHIHASDPQFIAAATQNG-FNIQLINQPAQSPDLNVLDLGFFRAIQALQYQSFPKNLDELILRVQDCYDFFDPEVLKYTWLQLQYVMVEILKCKGGNNFKNPHHAKRKLERLGLLPENVTVDQAVIDEAVTY 505
BLAST of mRNA_H-paniculata_contig11423.928.1 vs. uniprot
Match: UPI000B8AF499 (uncharacterized protein LOC110800263 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8AF499) HSP 1 Score: 75.9 bits (185), Expect = 8.520e-13 Identity = 47/152 (30.92%), Postives = 77/152 (50.66%), Query Frame = 1 Query: 112 RSSIRTLLLVALKEKMPWLESEEVVAEQDGATPHTEKDTPRKLNELERDGGWDFNLETQPAQSPDLNINDLGLFAYLKIRFRRERYGTIDGLVEGAKSMYDACDATTLERMWQSLFQRYNQILKALGGNDFEVEDIETKERQRAGSLPQSVD 567 RS + LL A+K K P +++ +QD A PH + R+ E G++ L QPAQSPD+NI DLG F ++ + ++ L+E ++ Y A D+ + W L +IL+ GGN+++ K+ +R G LP ++ Sbjct: 120 RSKMIEDLLPAIKSKWPSNACKDIWIQQDNARPHISPND-REFLEAATQDGFNIRLVNQPAQSPDMNILDLGFFRAIQSIQYKSFPDSVTSLIEAVENAYIALDSKAMNFTWMHLKYCMIEILQVQGGNNYKNPHKGKKKLERLGLLPTEIE 270 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11423.928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11423.928.1 >prot_H-paniculata_contig11423.928.1 ID=prot_H-paniculata_contig11423.928.1|Name=mRNA_H-paniculata_contig11423.928.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=154bp MPWLESEEVVAEQDGATPHTEKDTPRKLNELERDGGWDFNLETQPAQSPDback to top mRNA from alignment at H-paniculata_contig11423:4010..4650+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11423.928.1 ID=mRNA_H-paniculata_contig11423.928.1|Name=mRNA_H-paniculata_contig11423.928.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=641bp|location=Sequence derived from alignment at H-paniculata_contig11423:4010..4650+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11423:4010..4650+ >mRNA_H-paniculata_contig11423.928.1 ID=mRNA_H-paniculata_contig11423.928.1|Name=mRNA_H-paniculata_contig11423.928.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=924bp|location=Sequence derived from alignment at H-paniculata_contig11423:4010..4650+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |