mRNA_H-paniculata_contig34274.9156.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig34274.9156.1
Unique NamemRNA_H-paniculata_contig34274.9156.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: W7TGQ6_9STRA (Retrotransposon unclassified n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGQ6_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.530e-51
Identity = 107/245 (43.67%), Postives = 141/245 (57.55%), Query Frame = 1
Query:    4 ERTTEPLELVHTDIAGSVD-KSFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVA------RANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGG-TPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPS---YRIYNPENKSVQLSRHVRFDEEDF 705
            ER  EPLELVHTD+ G V+ +S GG R+A  F DDY+R R VY ++  SE+L  LK++ +D+       + N LR  R  SD GGEYT   F+ FC  +GI Q+F   Y  Q NG+ E+SWH +  MARA  I A + + +WA+A+ +A Y   R+       G TPY K +G+     HLR FGC A V   S +R K DD+A  G+ +GYD+   +   YRIY P       S HV FDEE F
Sbjct:   76 ERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESLDCLKRYIQDMNISFRDHKVNTLRGLR--SDNGGEYTGIDFKNFCKNHGIRQDFGMPYGPQDNGLAEKSWHILCNMARALRIQAGLGKGFWAEALNTAAYIWNRSRNSALGPGETPYYKMFGKHASVKHLRTFGCKAFVHDTSVRRGKFDDRAVEGILIGYDDIGNNPKCYRIYIPSLGRYIRSGHVTFDEETF 318          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: W7TIQ5_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIQ5_9STRA)

HSP 1 Score: 185 bits (469), Expect = 3.490e-51
Identity = 109/245 (44.49%), Postives = 143/245 (58.37%), Query Frame = 1
Query:    4 ERTTEPLELVHTDIAGSVD-KSFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVA------RANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGG-TPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPS---YRIYNPENKSVQLSRHVRFDEEDF 705
            ER  EPLELVHTD+ G V+ +S GG R+A  F DDY+R R VY ++  SE+L  LK++ +D+       + N LR  R  SD GGEYT   F+ FC  +GI Q+F   Y  Q NGV E+SWH +  MAR+  I A + +R+WA+A+ +A Y L R+ T     G TPY K +G+     H R FGC A V   S +R K DD+A  G+ +GYD+   +   YRIY P       S HV FDEE F
Sbjct:   76 ERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESLDCLKRYIQDMNISFRDHKVNTLRGLR--SDNGGEYTGIDFKNFCKNHGIRQDFGIPYGPQDNGVAEKSWHVLSNMARSLRIQAGLGKRFWAEALNTAAYILNRSRTSALGPGETPYYKMFGKHTSVKHFRTFGCKAFVHDTSVRRGKFDDRAVEGIMIGYDDIGNNPKCYRIYIPSIGKYIKSGHVTFDEETF 318          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: A0A6A3BSI6_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BSI6_HIBSY)

HSP 1 Score: 187 bits (474), Expect = 1.680e-50
Identity = 99/234 (42.31%), Postives = 139/234 (59.40%), Query Frame = 1
Query:    1 EERTTEPLELVHTDIAGSVD-KSFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVARANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGGTPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPSYRIYNPENKSVQLSRHVRFDEE 699
            E R  +PLEL+HTD+ GS+   S G   +  +F+DD+SR   VY L+Q SE     K+F+  V R +G +IK  +SD+GGE+T + F++FC  NGI +      + QQNGV ER   +I +MAR+ + +  + + +WA+AV  AVY   R+PTR   G TP E W G  P   HLR FG    V    ++  KLDDK  + + +GYD  S  Y++YNP NK   +SR V F+EE
Sbjct:  399 ETRAKKPLELIHTDVCGSIKPSSLGNSNYFLLFIDDFSRKTWVYFLKQKSEVFEVFKKFKVAVERESGRKIKAMRSDRGGEFTSREFQEFCEANGIRRPMIVPRSPQQNGVAERKNITILDMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVWGKTPQEAWSGRKPGISHLRTFGSITHVHVPDERITKLDDKNESFIFIGYDANSKGYKLYNPNNKKFVISRDVVFNEE 632          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: A0A2Z7CM54_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CM54_9LAMI)

HSP 1 Score: 185 bits (469), Expect = 4.650e-50
Identity = 98/232 (42.24%), Postives = 137/232 (59.05%), Query Frame = 1
Query:    7 RTTEPLELVHTDIAGSVD-KSFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVARANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGGTPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPSYRIYNPENKSVQLSRHVRFDEE 699
            R   PLEL+H+D+ G +   S G   +  IF+DD+SR   VY +++ SE   T K+F+  V + +G +I+  +SD+GGE+T   F++FC +NGI +  +  Y+ QQNGV ER   +I  M R+ +   NM + +WA+AV  AVY   R  T+  NG TP E   G  P   HLRVFG  A      ++R KLDDK+   V +GYD  S  Y++YNP N  + LSR V FDEE
Sbjct:  471 RAQHPLELIHSDVCGPIKPSSLGKSNYFIIFIDDFSRKTWVYFIKEKSEVFETFKKFKIMVEKQSGYQIQALRSDRGGEFTSNEFKKFCEDNGIHRPMTTPYSPQQNGVSERKNRTILNMVRSMLKRKNMPKEFWAEAVTCAVYLTNRWHTKSVNGKTPNEDCSGYKPNVAHLRVFGSIAYAHVPDEKRTKLDDKSARYVFIGYDTNSKCYKLYNPNNGKIILSRDVEFDEE 702          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: A0A2K3KIW4_TRIPR (Copia-type polyprotein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KIW4_TRIPR)

HSP 1 Score: 170 bits (431), Expect = 9.990e-49
Identity = 88/231 (38.10%), Postives = 135/231 (58.44%), Query Frame = 1
Query:    7 RTTEPLELVHTDIAGSVD-KSFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVARANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGGTPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPSYRIYNPENKSVQLSRHVRFDE 696
            R +  LEL+H+DI G +  +S GG R+   F DD+SR   +Y L++ S AL   K F+  V +     I+  ++D+GGEYT  AF  FC++ GI+++   AYT QQNGV ER   ++  + R+ +   ++ +R+W +A++ A Y + R+PT      TP E W G  P   H +VFGC A V     QR+KLDDK+   + +G  E S +Y++Y+P    + +SR V F+E
Sbjct:   33 RASARLELIHSDICGPITPQSNGGSRYFITFTDDFSRKTWIYVLKEKSLALDCFKSFKALVEKEAKCAIQCLRTDRGGEYTSNAFSDFCSKEGIKRQLIAAYTPQQNGVSERKNRTLLNIVRSMIHARSVPKRFWPEAIKWATYVMNRSPTLSVKDMTPEEAWSGRKPSVHHFKVFGCVAHVHIHDSQRKKLDDKSKKCILLGVSEESKAYKLYDPIENKIIISRDVIFEE 263          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: Q9C7Y1_ARATH (Copia-type polyprotein, putative; 28768-32772 n=3 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9C7Y1_ARATH)

HSP 1 Score: 180 bits (457), Expect = 3.270e-48
Identity = 93/232 (40.09%), Postives = 143/232 (61.64%), Query Frame = 1
Query:    7 RTTEPLELVHTDIAGSVDK-SFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVARANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGGTPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPSYRIYNPENKSVQLSRHVRFDEE 699
            ++T+ L+LVHTDI G ++  S  G R+   F+DD+SR    Y L + SE     K+F+ +V R +G ++   +SD+GGEY  + F ++C E GI+++ + AYT QQNGV ER   S+  M R  ++  ++ R++W +AV+ AVY L R+P++  N  TP EKW    P  +HLR+FG  A  +   Q+R KLD+K+   V  G  + S +YR+Y+P    + +SR V+FDEE
Sbjct:  491 KSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFDEE 722          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: W7T174_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T174_9STRA)

HSP 1 Score: 180 bits (456), Expect = 3.920e-48
Identity = 106/245 (43.27%), Postives = 141/245 (57.55%), Query Frame = 1
Query:    4 ERTTEPLELVHTDIAGSVD-KSFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVA------RANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGG-TPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPS---YRIYNPENKSVQLSRHVRFDEEDF 705
            ER  EPLELVHTD+ G V+ +S GG R+A  F DDY+R R VY ++  SE+L  LK++ +D+       + N LR  R  SD GGEYT   F+ FC  +GI Q+F   Y  Q NG+ E+SWH +  MARA  I A + + +WA+A+ +A Y   R+       G TPY K +G+    +H R FGC A V   S +R K DD+A  G+ +GYD+   +   YRIY P       S HV FDEE F
Sbjct:  122 ERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESLDCLKRYIQDMNISFRDHKVNTLRGLR--SDNGGEYTGVDFKNFCKNHGIRQDFGMPYGPQDNGLAEKSWHILCNMARALRIQAGLGKGFWAEALNTATYIWNRSRNSTLGAGETPYYKMFGKHASVNHFRTFGCKAFVHDTSVRRGKFDDRAVEGILIGYDDIGNNPKCYRIYIPSLGRYIRSGHVTFDEETF 364          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: A0A151R9Z3_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R9Z3_CAJCA)

HSP 1 Score: 172 bits (437), Expect = 4.230e-48
Identity = 92/233 (39.48%), Postives = 138/233 (59.23%), Query Frame = 1
Query:    1 EERTTEPLELVHTDIAGSVD-KSFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVARANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGGTPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPSYRIYNPENKSVQLSRHVRFDE 696
            E R  E L L+HTD+ G +  +SF G ++   F+DD+SR   VY L++  E   T K+F+  V +     +K  +SD+GGE+T   F ++C E+GI++  +  Y+ QQNGV ER   +I +M R+ +   NM +++WA+AV+ AVY   R P       TP E W G  P   HLRVFG  A      QQR KL+D++   + +GYDE S +Y++++P+NK V +SR V  +E
Sbjct:   82 EYRAKEQLGLIHTDLCGPITPESFSGKKYFVSFIDDFSRKTWVYFLKEKLEVFETFKKFKVMVEKEMSTFVKAVRSDRGGEFTSVEFNKYCEEHGIKRFLTAPYSPQQNGVAERKNRTILDMVRSMLKGKNMPKKFWAEAVQCAVYVQNRCPHAKLGEKTPQEIWSGMKPSVSHLRVFGSLAYGQVPRQQRTKLEDRSKKYIFIGYDEKSKAYKLFDPDNKKVVVSRDVHVEE 314          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: A0A6L2N7P6_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2N7P6_TANCI)

HSP 1 Score: 179 bits (453), Expect = 1.020e-47
Identity = 96/226 (42.48%), Postives = 134/226 (59.29%), Query Frame = 1
Query:   22 LELVHTDIAGSVDK-SFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVARANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGGTPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPSYRIYNPENKSVQLSRHVRFDE 696
            L+L+H D+ G +   S GG R+  +F+DDYSRM  VY L+  SEA    K+F+  V + +G  IK  Q+D+GGE+    F  FC E GI +E +  YT QQN   ER   +I EMAR+ M    + + +WA+AV ++VY L  +PT+     TPY+ W G  PK  HL VFGC A  +  S  R KLD+K+   + VGY   S +Y++Y+P N  V +SR V F+E
Sbjct:  506 LDLIHADLCGPMSVISIGGSRYFLLFIDDYSRMSWVYFLKNKSEAFNYFKKFKSYVEKQSGRNIKVIQTDRGGEFMSAEFITFCEEYGIHKELTAPYTPQQNSAAERKNRAIVEMARSMMNAKGVPKTFWAEAVATSVYLLIISPTKAVYNRTPYKAWKGNKPKVSHLCVFGCIANALLNSNSRLKLDEKSVKCIVVGYSPQSKAYKLYDPLNGKVLISRDVVFNE 731          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: A0A4Y1QXI2_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QXI2_PRUDU)

HSP 1 Score: 176 bits (446), Expect = 3.270e-47
Identity = 92/232 (39.66%), Postives = 139/232 (59.91%), Query Frame = 1
Query:    7 RTTEPLELVHTDIAGSVDK-SFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVARANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGGTPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPSYRIYNPENKSVQLSRHVRFDEE 699
            R + PLELVHTDI G +   S  G ++  +F DD +RM  VY +R  S A+   ++F+      +G +IK  +SD+GGE+    F  FCAE GI+++ + AY+ QQNGV ER   ++ EMA++ +   ++   +WA+AV +AVY L R PT+  N  TP+E + G  P   HL++FG    V+  S  R KL++ +   + VGY      YR+++P N+ + LSR V+FDEE
Sbjct:  211 RASYPLELVHTDICGPMKTDSISGNKYFLLFTDDCTRMSWVYFIRNKSSAMECFRKFKAMTELQSGYKIKGLRSDRGGEFLSSEFNSFCAEVGIQRQLTMAYSPQQNGVAERKNRTVVEMAKSMLHEKSIPYEFWAEAVNTAVYLLNRCPTKSLNKVTPFEAYTGRKPGIAHLKIFGSPCHVLIPSALRHKLEENSHKCIFVGYGLCEKGYRLFDPSNRKIMLSRDVKFDEE 442          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7TGQ6_9STRA1.530e-5143.67Retrotransposon unclassified n=1 Tax=Nannochlorops... [more]
W7TIQ5_9STRA3.490e-5144.49Gag-pol polyprotein n=1 Tax=Nannochloropsis gadita... [more]
A0A6A3BSI6_HIBSY1.680e-5042.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A2Z7CM54_9LAMI4.650e-5042.24Uncharacterized protein (Fragment) n=1 Tax=Dorcoce... [more]
A0A2K3KIW4_TRIPR9.990e-4938.10Copia-type polyprotein (Fragment) n=1 Tax=Trifoliu... [more]
Q9C7Y1_ARATH3.270e-4840.09Copia-type polyprotein, putative; 28768-32772 n=3 ... [more]
W7T174_9STRA3.920e-4843.27Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]
A0A151R9Z3_CAJCA4.230e-4839.48Retrovirus-related Pol polyprotein from transposon... [more]
A0A6L2N7P6_TANCI1.020e-4742.48Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y1QXI2_PRUDU3.270e-4739.66Transposable element protein n=1 Tax=Prunus dulcis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig34274contigH-paniculata_contig34274:517..1254 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score179.5
Seed ortholog evalue1.9e-42
Seed eggNOG ortholog3659.XP_004149950.1
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:1901360,GO:1901363
EggNOG free text desc.Pentatricopeptide repeat-containing protein
EggNOG OGs37K71@33090,3GFIF@35493,4JGHT@91835,COG2801@1,KOG0017@2759,KOG4197@1,KOG4197@2759
COG Functional cat.L
Best tax levelfabids
Best eggNOG OGNA|NA|NA
Exons1
Model size738
Cds size738
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930058.773825-CDS-H-paniculata_contig34274:516..12541622930058.773825-CDS-H-paniculata_contig34274:516..1254Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34274 517..1254 -
1691481129.6327884-CDS-H-paniculata_contig34274:516..12541691481129.6327884-CDS-H-paniculata_contig34274:516..1254Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34274 517..1254 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig34274.9156.1prot_H-paniculata_contig34274.9156.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig34274 517..1254 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig34274.9156.1

>prot_H-paniculata_contig34274.9156.1 ID=prot_H-paniculata_contig34274.9156.1|Name=mRNA_H-paniculata_contig34274.9156.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=246bp
EERTTEPLELVHTDIAGSVDKSFGGCRFAFIFVDDYSRMRKVYTLRQNSE
ALWTLKQFERDVARANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFS
GAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRA
PTRPHNGGTPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTG
VCVGYDEYSPSYRIYNPENKSVQLSRHVRFDEEDFVTDHRGQQEHE
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mRNA from alignment at H-paniculata_contig34274:517..1254-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig34274.9156.1 ID=mRNA_H-paniculata_contig34274.9156.1|Name=mRNA_H-paniculata_contig34274.9156.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=738bp|location=Sequence derived from alignment at H-paniculata_contig34274:517..1254- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAAGAGCGGACGACCGAACCGTTGGAGTTGGTGCACACCGACATAGCCGG ATCGGTCGACAAGTCCTTCGGAGGATGTCGCTTCGCCTTCATCTTCGTCG ACGACTACAGCAGAATGCGCAAAGTCTATACTTTGCGACAAAATTCGGAG GCGCTATGGACCCTGAAGCAATTCGAGAGGGACGTAGCGAGGGCAAACGG TTTACGGATTAAGCGCCGTCAGTCAGATCAGGGAGGAGAATATACTGAGA AGGCTTTTAGGCAATTCTGCGCGGAAAATGGCATCGAGCAGGAGTTCTCT GGTGCGTATACAACGCAGCAAAACGGTGTGATGGAGCGCAGCTGGCACAG CATTTTCGAGATGGCAAGAGCCAACATGATCACCGCCAACATGCGTCGTC GATATTGGGCGAAGGCGGTGCGCTCGGCAGTGTACTGCCTAAAGCGCGCC CCGACGCGACCGCACAACGGAGGAACGCCATACGAAAAATGGTACGGCGA GACACCAAAGTCGGACCACCTTCGTGTCTTCGGCTGCACGGCGTGTGTTA TGTTCCAGTCGCAGCAGAGACGCAAGCTCGACGACAAAGCATGGACGGGG GTGTGTGTAGGGTACGACGAGTACAGCCCGAGTTATCGCATATATAACCC GGAAAACAAGAGCGTCCAGTTGAGCAGGCATGTGAGATTTGACGAAGAGG ACTTCGTAACCGATCATCGCGGACAGCAGGAGCACGAA
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Coding sequence (CDS) from alignment at H-paniculata_contig34274:517..1254-

>mRNA_H-paniculata_contig34274.9156.1 ID=mRNA_H-paniculata_contig34274.9156.1|Name=mRNA_H-paniculata_contig34274.9156.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1476bp|location=Sequence derived from alignment at H-paniculata_contig34274:517..1254- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAAGAGCGGACGACCGAACCGTTGGAGTTGGTGCACACCGACATAGCCGG
ATCGGTCGACAAGTCCTTCGGAGGATGTCGCTTCGCCTTCATCTTCGTCG
ACGACTACAGCAGAATGCGCAAAGTCTATACTTTGCGACAAAATTCGGAG
GCGCTATGGACCCTGAAGCAATTCGAGAGGGACGTAGCGAGGGCAAACGG
TTTACGGATTAAGCGCCGTCAGTCAGATCAGGGAGGAGAATATACTGAGA
AGGCTTTTAGGCAATTCTGCGCGGAAAATGGCATCGAGCAGGAGTTCTCT
GGTGCGTATACAACGCAGCAAAACGGTGTGATGGAGCGCAGCTGGCACAG
CATTTTCGAGATGGCAAGAGCCAACATGATCACCGCCAACATGCGTCGTC
GATATTGGGCGAAGGCGGTGCGCTCGGCAGTGTACTGCCTAAAGCGCGCC
CCGACGCGACCGCACAACGGAGGAACGCCATACGAAAAATGGTACGGCGA
GACACCAAAGTCGGACCACCTTCGTGTCTTCGGCTGCACGGCGTGTGTTA
TGTTCCAGTCGCAGCAGAGACGCAAGCTCGACGACAAAGCATGGACGGGG
GTGTGTGTAGGGTACGACGAGTACAGCCCGAGTTATCGCATATATAACCC
GGAAAACAAGAGCGTCCAGTTGAGCAGGCATGTGAGATTTGACGAAGAGG
ACTTCGTAACCGATCATCGCGGACAGCAGGAGCACGAAGAAGAGCGGACG
ACCGAACCGTTGGAGTTGGTGCACACCGACATAGCCGGATCGGTCGACAA
GTCCTTCGGAGGATGTCGCTTCGCCTTCATCTTCGTCGACGACTACAGCA
GAATGCGCAAAGTCTATACTTTGCGACAAAATTCGGAGGCGCTATGGACC
CTGAAGCAATTCGAGAGGGACGTAGCGAGGGCAAACGGTTTACGGATTAA
GCGCCGTCAGTCAGATCAGGGAGGAGAATATACTGAGAAGGCTTTTAGGC
AATTCTGCGCGGAAAATGGCATCGAGCAGGAGTTCTCTGGTGCGTATACA
ACGCAGCAAAACGGTGTGATGGAGCGCAGCTGGCACAGCATTTTCGAGAT
GGCAAGAGCCAACATGATCACCGCCAACATGCGTCGTCGATATTGGGCGA
AGGCGGTGCGCTCGGCAGTGTACTGCCTAAAGCGCGCCCCGACGCGACCG
CACAACGGAGGAACGCCATACGAAAAATGGTACGGCGAGACACCAAAGTC
GGACCACCTTCGTGTCTTCGGCTGCACGGCGTGTGTTATGTTCCAGTCGC
AGCAGAGACGCAAGCTCGACGACAAAGCATGGACGGGGGTGTGTGTAGGG
TACGACGAGTACAGCCCGAGTTATCGCATATATAACCCGGAAAACAAGAG
CGTCCAGTTGAGCAGGCATGTGAGATTTGACGAAGAGGACTTCGTAACCG
ATCATCGCGGACAGCAGGAGCACGAA
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