mRNA_H-paniculata_contig34214.9143.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig34214.9143.1 vs. uniprot
Match: A0A835Z1C5_9STRA (Costars domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1C5_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.580e-14 Identity = 29/40 (72.50%), Postives = 38/40 (95.00%), Query Frame = 1
Query: 19 VGVTFGKLFDDEEGQQFFEAIVGTLRAAKKRGIVDFKGQV 138
+GVT+G LFDDEEGQ +FEA++GTL+AAKKRG+VDF+GQ+
Sbjct: 28 IGVTYGVLFDDEEGQDYFEALMGTLKAAKKRGVVDFQGQM 67
BLAST of mRNA_H-paniculata_contig34214.9143.1 vs. uniprot
Match: G0QMS5_ICHMG (Costars domain-containing protein n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0QMS5_ICHMG) HSP 1 Score: 63.5 bits (153), Expect = 4.080e-12 Identity = 26/38 (68.42%), Postives = 36/38 (94.74%), Query Frame = 1
Query: 25 VTFGKLFDDEEGQQFFEAIVGTLRAAKKRGIVDFKGQV 138
V FG+LFDDE+ QQ++EA+VGTL+AAKK+G+VDF+GQ+
Sbjct: 30 VPFGQLFDDEKAQQYYEALVGTLKAAKKQGVVDFQGQI 67
BLAST of mRNA_H-paniculata_contig34214.9143.1 vs. uniprot
Match: B7FY17_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FY17_PHATC) HSP 1 Score: 61.6 bits (148), Expect = 3.390e-11 Identity = 25/38 (65.79%), Postives = 35/38 (92.11%), Query Frame = 1
Query: 25 VTFGKLFDDEEGQQFFEAIVGTLRAAKKRGIVDFKGQV 138
V FG+LFDD+ QQF+EA+VGTL++AK+RG++DFKGQ+
Sbjct: 41 VKFGELFDDDNVQQFYEALVGTLKSAKRRGVIDFKGQM 78
BLAST of mRNA_H-paniculata_contig34214.9143.1 vs. uniprot
Match: A0A5B8MVS8_9CHLO (Costars domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MVS8_9CHLO) HSP 1 Score: 60.1 bits (144), Expect = 1.190e-10 Identity = 26/38 (68.42%), Postives = 34/38 (89.47%), Query Frame = 1
Query: 25 VTFGKLFDDEEGQQFFEAIVGTLRAAKKRGIVDFKGQV 138
V FG LF+DE+ +Q++EAIVGTL+AAKKRG +DFKGQ+
Sbjct: 33 VKFGVLFEDEKVEQYYEAIVGTLKAAKKRGFIDFKGQM 70
BLAST of mRNA_H-paniculata_contig34214.9143.1 vs. uniprot
Match: A0A6G0X2G9_9STRA (Costars domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2G9_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 3.870e-10 Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 1 ADFLVAVGVTFGKLFDDEEGQQFFEAIVGTLRAAKKRGIVDFKGQV 138
AD GVTFG LFDDE Q FEA++GTLRAAK++ ++DF+GQ+
Sbjct: 24 ADGQKQFGVTFGILFDDERCQDLFEALMGTLRAAKRKKVIDFQGQL 69
BLAST of mRNA_H-paniculata_contig34214.9143.1 vs. uniprot
Match: A0A067CJ91_SAPPC (Costars domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJ91_SAPPC) HSP 1 Score: 58.2 bits (139), Expect = 5.500e-10 Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 4 DFLVAVGVTFGKLFDDEEGQQFFEAIVGTLRAAKKRGIVDFKGQV 138
D VA GVTFG+LFDDE FEA++GTLRAAK++ ++D+ GQ+
Sbjct: 25 DGSVAFGVTFGELFDDERCVDLFEALMGTLRAAKRKKVIDYPGQL 69
BLAST of mRNA_H-paniculata_contig34214.9143.1 vs. uniprot
Match: A0A1V9YE86_9STRA (Costars family protein ABRACL isoform X2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YE86_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 2.340e-9 Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 1 ADFLVAVGVTFGKLFDDEEGQQFFEAIVGTLRAAKKRGIVDFKGQV 138
AD GVTFG+LFDDE FEA++GTLRAAK++ ++D+ GQ+
Sbjct: 24 ADGKTVFGVTFGELFDDERCVDLFEALMGTLRAAKRKKVIDYPGQL 69
BLAST of mRNA_H-paniculata_contig34214.9143.1 vs. uniprot
Match: A0A7R9ZT53_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZT53_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 2.790e-9 Identity = 24/38 (63.16%), Postives = 34/38 (89.47%), Query Frame = 1
Query: 25 VTFGKLFDDEEGQQFFEAIVGTLRAAKKRGIVDFKGQV 138
V FG+LFDD+E Q ++EA+VGTL++AKKRG++ FKGQ+
Sbjct: 106 VLFGELFDDDEVQNYYEALVGTLKSAKKRGLIAFKGQM 143
BLAST of mRNA_H-paniculata_contig34214.9143.1 vs. uniprot
Match: A0A7S2U4Q9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U4Q9_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 2.900e-9 Identity = 24/38 (63.16%), Postives = 35/38 (92.11%), Query Frame = 1
Query: 25 VTFGKLFDDEEGQQFFEAIVGTLRAAKKRGIVDFKGQV 138
V FG+LF+DEE +QF+EA+VGTL++AKKRG++ F+GQ+
Sbjct: 3 VLFGELFEDEEVEQFYEALVGTLKSAKKRGVIVFRGQI 40
BLAST of mRNA_H-paniculata_contig34214.9143.1 vs. uniprot
Match: A0A7S1UZ17_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZ17_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 3.410e-9 Identity = 25/38 (65.79%), Postives = 33/38 (86.84%), Query Frame = 1
Query: 25 VTFGKLFDDEEGQQFFEAIVGTLRAAKKRGIVDFKGQV 138
V FGKLFDD++ QQ++EA+VGTL+ AKKRG + FKGQ+
Sbjct: 52 VLFGKLFDDDQAQQYYEALVGTLKCAKKRGQITFKGQM 89 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34214.9143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34214.9143.1 >prot_H-paniculata_contig34214.9143.1 ID=prot_H-paniculata_contig34214.9143.1|Name=mRNA_H-paniculata_contig34214.9143.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=46bp ADFLVAVGVTFGKLFDDEEGQQFFEAIVGTLRAAKKRGIVDFKGQVback to top mRNA from alignment at H-paniculata_contig34214:1579..1716- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34214.9143.1 ID=mRNA_H-paniculata_contig34214.9143.1|Name=mRNA_H-paniculata_contig34214.9143.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=138bp|location=Sequence derived from alignment at H-paniculata_contig34214:1579..1716- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34214:1579..1716- >mRNA_H-paniculata_contig34214.9143.1 ID=mRNA_H-paniculata_contig34214.9143.1|Name=mRNA_H-paniculata_contig34214.9143.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=276bp|location=Sequence derived from alignment at H-paniculata_contig34214:1579..1716- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |