mRNA_H-paniculata_contig3419.9133.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig3419.9133.1 vs. uniprot
Match: D7FKK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKK5_ECTSI) HSP 1 Score: 245 bits (625), Expect = 3.690e-73 Identity = 121/125 (96.80%), Postives = 123/125 (98.40%), Query Frame = 1
Query: 1 MLQQSLDDPALEVKVKGYIPGAVLRNLRPDSPEDEHWSNEIRRVTVLFVNLGLKEQTLLAAAVYDEAMEEMHKVMVAVQNSVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAALR 375
MLQQSLDDP LEVKVKGYIPGAVLRNLRPDSPEDEHWSNEIRRVTVLFVNLGLKEQTLLAAAVYDEAM+EMH+VMVAVQ SVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAALR
Sbjct: 246 MLQQSLDDPLLEVKVKGYIPGAVLRNLRPDSPEDEHWSNEIRRVTVLFVNLGLKEQTLLAAAVYDEAMKEMHQVMVAVQESVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAALR 370
BLAST of mRNA_H-paniculata_contig3419.9133.1 vs. uniprot
Match: A0A7S1UGU7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGU7_9STRA) HSP 1 Score: 164 bits (416), Expect = 5.450e-50 Identity = 78/124 (62.90%), Postives = 95/124 (76.61%), Query Frame = 1
Query: 1 MLQQSLDDPALEVKVKGYIPGAVLRNLRPDSPEDEHWSNEIRRVTVLFVNLGLKEQTLLAAAVYDEAMEEMHKVMVAVQNSVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAAL 372
ML LDDP LE +V+ Y+ GAVL NL DS +DE W NE R V+ +FVNLGL Q LLAA +Y+EAM++++ V+ +VQ +VY YEGSINKFLMDDKGSTL+A +GLPPV H DDP R VLAAL
Sbjct: 2 MLHTELDDPTLESRVRAYVAGAVLPNLNADSRDDESWGNETRYVSTMFVNLGLTSQNLLAAGLYNEAMQQVNDVLESVQRAVYRYEGSINKFLMDDKGSTLIACFGLPPVSHEDDPLRAVLAAL 125
BLAST of mRNA_H-paniculata_contig3419.9133.1 vs. uniprot
Match: A0A6H5JI44_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI44_9PHAE) HSP 1 Score: 173 bits (438), Expect = 1.340e-47 Identity = 88/105 (83.81%), Postives = 95/105 (90.48%), Query Frame = 1
Query: 1 MLQQSL-DDPALEVKVKGYIPGAVLRNLRPDSPEDEHWSNEIRRVTVLFVNLGLKEQTLLAAAVYDEAMEEMHKVMVAVQNSVYEYEGSINKFLMDDKGSTLVAV 312
MLQQ+L DDP L+VK GYIP AV+RNLR DSPEDE WSNEIRRVTVLFVNLGL +QTLLAAA YDEAM+EMH+VMVAVQ SVYEYEGSINKFLMDDKGSTL+AV
Sbjct: 41 MLQQTLEDDPLLDVKATGYIPSAVMRNLRLDSPEDEQWSNEIRRVTVLFVNLGLIQQTLLAAAFYDEAMKEMHQVMVAVQESVYEYEGSINKFLMDDKGSTLIAV 145
BLAST of mRNA_H-paniculata_contig3419.9133.1 vs. uniprot
Match: A0A7R9YAC5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAC5_9STRA) HSP 1 Score: 157 bits (398), Expect = 1.030e-43 Identity = 73/124 (58.87%), Postives = 92/124 (74.19%), Query Frame = 1
Query: 1 MLQQSLDDPALEVKVKGYIPGAVLRNLRPDSPEDEHWSNEIRRVTVLFVNLGLKEQTLLAAAVYDEAMEEMHKVMVAVQNSVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAAL 372
M L+DP+LE +V+ Y+ GA+L NL DS +DE W NE R V+ +FVNLGL + LLAA +YDEAM ++H V+ + Q +VY YEGSINKFLMDDKGSTL+A +GLPPV H DD R VLAA+
Sbjct: 69 MQVSQLEDPSLENRVRAYVAGAILPNLNADSRDDESWGNETRYVSTMFVNLGLSSENLLAAGLYDEAMFQVHNVLTSAQRAVYRYEGSINKFLMDDKGSTLIACFGLPPVSHEDDSLRAVLAAI 192
BLAST of mRNA_H-paniculata_contig3419.9133.1 vs. uniprot
Match: A0A482UIP1_9ARCH (Guanylate cyclase domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UIP1_9ARCH) HSP 1 Score: 142 bits (358), Expect = 1.440e-38 Identity = 66/121 (54.55%), Postives = 93/121 (76.86%), Query Frame = 1
Query: 16 LDDPALEV--KVKGYIPGAVLRNLRPDSPEDEHWSNEIRRVTVLFVNLGLKEQTLLAAAVYDEAMEEMHKVMVAVQNSVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAAL 372
L+D EV +++ Y+ GA+L + PD P+ E W +++R VTVLFVNLGLK+ +LAA+ YD+AM +MH+V+ A Q++VY+YEG++NK L DDKGST++AV+GLPP+ H DD TRGVL L
Sbjct: 148 LEDAGDEVERRLRNYVAGAILPWIDPDVPDKEVWGSDLRNVTVLFVNLGLKDMDMLAASKYDDAMVKMHEVLRAAQSAVYQYEGAVNKCLNDDKGSTMIAVFGLPPLSHEDDATRGVLCGL 268
BLAST of mRNA_H-paniculata_contig3419.9133.1 vs. uniprot
Match: A0A5A8CC48_CAFRO (Phosphodiesterase n=7 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CC48_CAFRO) HSP 1 Score: 144 bits (363), Expect = 1.780e-37 Identity = 69/123 (56.10%), Postives = 89/123 (72.36%), Query Frame = 1
Query: 4 LQQSLDDPALEVKVKGYIPGAVLRNLRPDSPEDEHWSNEIRRVTVLFVNLGLKEQTLLAAAVYDEAMEEMHKVMVAVQNSVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAAL 372
++ L A E ++K Y PGA+ + PD+ E E W ++R V+VLFVNLGL+ LLAAA Y E M +H+V+ VQ++VY YEGS+NKFLMDDKGSTL+AV+GLPP+ H DD TR VLAAL
Sbjct: 236 IELQLAGRAAEARLKQYTPGAIQTWISPDALELESWGGDLRNVSVLFVNLGLRNDDLLAAAKYREPMHRVHEVLRTVQSAVYRYEGSVNKFLMDDKGSTLIAVFGLPPISHHDDSTRAVLAAL 358
BLAST of mRNA_H-paniculata_contig3419.9133.1 vs. uniprot
Match: A0A7S2R6Q5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6Q5_9STRA) HSP 1 Score: 131 bits (329), Expect = 6.710e-33 Identity = 64/117 (54.70%), Postives = 85/117 (72.65%), Query Frame = 1
Query: 25 PALEVKVKGYIPGAVLRNLRPDSPEDEHWSNEIRRVTVLFVNLGLKEQTLLAAAVYDEAMEEMHKVMVAVQNSVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAALR 375
P LE + Y+PG+V ++ ++ ++E W NE+RRV LFVNLGL++ LL+AA D + ++ V+ VQ +VY+YEGSINKFLMDDKGSTL+A +GL P GH DD RGVLAALR
Sbjct: 190 PNLEQGIDRYVPGSVTAHI-DETNDEEKWYNEVRRVATLFVNLGLEDAMLLSAAYDDHVLGQVQCVLEGVQKAVYQYEGSINKFLMDDKGSTLIACFGLTPNGHEDDAVRGVLAALR 305
BLAST of mRNA_H-paniculata_contig3419.9133.1 vs. uniprot
Match: A0A7S2C3L5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C3L5_9STRA) HSP 1 Score: 114 bits (284), Expect = 3.230e-30 Identity = 55/94 (58.51%), Postives = 71/94 (75.53%), Query Frame = 1
Query: 97 EDEHWSNEIRRVTVLFVNLGLKEQTLLAAAVY--DEAMEEMHKVMVAVQNSVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAAL 372
E W+NE RR+ VLFVNLGLK+ LLAA ++AM+++H V+V VQ +VY+YEGS+NKFLMDDKGSTL+A +GL PV H DD R LA++
Sbjct: 6 ESMKWANETRRIAVLFVNLGLKDHHLLAAGDVRTEDAMKQVHDVLVGVQKAVYKYEGSVNKFLMDDKGSTLLACFGLSPVSHIDDALRACLASI 99
BLAST of mRNA_H-paniculata_contig3419.9133.1 vs. uniprot
Match: F0XWN7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWN7_AURAN) HSP 1 Score: 123 bits (309), Expect = 3.350e-30 Identity = 65/123 (52.85%), Postives = 80/123 (65.04%), Query Frame = 1
Query: 22 DPALEVKVKGYIPGAVLRNLRPDSPEDEHWSNEIRRVTVLFVNLGLKEQTLLAAAVY-----DEAMEEMHKVMVAVQNSVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAALR 375
+ ALEV+++ YIP +VL L+ DS E E W+NEI V+FVNLG+ E L AA + +H A Q +VYEYEGS+NKFL DDKGSTL+A +GLPP H DDP R VLAALR
Sbjct: 795 EAALEVRLERYIPRSVLAALQRDSRECEKWANEITSCVVVFVNLGISEAMLNGAADARSDPDGSRLRFLHDAFGAAQKAVYEYEGSVNKFLHDDKGSTLIACWGLPPTTHVDDPVRAVLAALR 917
BLAST of mRNA_H-paniculata_contig3419.9133.1 vs. uniprot
Match: A0A7S0H2E7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H2E7_9EUKA) HSP 1 Score: 116 bits (290), Expect = 1.210e-27 Identity = 59/115 (51.30%), Postives = 86/115 (74.78%), Query Frame = 1
Query: 40 KVKGYIPGAVLRNLRPDSPE-DEHWSNEIRRVTVLFVNLGLKEQTLLAAAVY--DEAMEEMHKVMVAVQNSVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAALR 375
+V Y+PGAV RP + +E W++E+R +TVLFVNLGL + AA +Y D+ ++ +H +M VQ +VY+YEGS+NKFLMDDKGSTL+AV+GLPP+ H +DP RG+L++++
Sbjct: 274 RVLQYVPGAV----RPYVKDFEESWADELRVITVLFVNLGLVKG---AAELYNNDDDLKRIHHIMQTVQKAVYKYEGSLNKFLMDDKGSTLIAVFGLPPLAHENDPVRGLLSSIQ 381 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3419.9133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3419.9133.1 >prot_H-paniculata_contig3419.9133.1 ID=prot_H-paniculata_contig3419.9133.1|Name=mRNA_H-paniculata_contig3419.9133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp MLQQSLDDPALEVKVKGYIPGAVLRNLRPDSPEDEHWSNEIRRVTVLFVNback to top mRNA from alignment at H-paniculata_contig3419:17099..18061+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3419.9133.1 ID=mRNA_H-paniculata_contig3419.9133.1|Name=mRNA_H-paniculata_contig3419.9133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=963bp|location=Sequence derived from alignment at H-paniculata_contig3419:17099..18061+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3419:17099..18061+ >mRNA_H-paniculata_contig3419.9133.1 ID=mRNA_H-paniculata_contig3419.9133.1|Name=mRNA_H-paniculata_contig3419.9133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=756bp|location=Sequence derived from alignment at H-paniculata_contig3419:17099..18061+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |