prot_H-paniculata_contig34123.9116.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig34123.9116.1
Unique Nameprot_H-paniculata_contig34123.9116.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length445
Homology
BLAST of mRNA_H-paniculata_contig34123.9116.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 3.230e-87
Identity = 174/457 (38.07%), Postives = 252/457 (55.14%), Query Frame = 0
Query:    1 MKLGTLNINGVKGKLTQLQRLLEREDLACCALQETLLRPTDWRLKVPGYQSFSACGGNVASTRGVSLLVKKQFSAYTVGKGSAWHLLVRCFGSGLTQPWIVGTVYIPHRGTGDKPVGAILKDIAEVRRKYPNDSIAIMGDWNQTKNRVNKALAKKVDPELQINE--PRNAEFGTRNK-TNRCIDHIATLCNSTCETGRAA-ILRRVDLSDHFPVVCM-------VGCSNEVAPPLDLKTQSTRPRIDVRKLPRPETKKYCGKGPEGRTNHFNVIGSNYWAPLVDLLETQEDGWDKSEIQAKADASAEKLVSTCHTLANDYNLV-NPGTGGNQKLKSHIAKAIDQKEKTYERAMRTKLGSEKSQRRWKRYHQLRRKVKQLVKQDAKHRWARTLVKVSNQMVDDPREFWKWSSNLAGWRQATASYGVQPMCHPDSGELLTSVPHIRDAWAVHYGRLATD 445
            +K+ TLNINGVK K  QLQR+L    + C ALQET L  TDW L VPGY++F+  G   +STRG ++L++ +  A TVGK S WH  VRC+                  G G  P+  +   + ++R KYPNDSI +MGD+N+ + RV +      +  +++ E   ++A+ GTR+  + R IDHI T      +T RA  +LR+VD+SDH+PVV             + V  P++ +T     RI+   +P P T  Y   GP GR NH  VI +NYW PL DL+E   +     +  A  DA+A ++V   H +A +     +  T     LK  IA+AID + + Y  A R +  S +++  W+RYH+ R K ++LV++D +  W + L   S Q+  DP+  W + S +AGW++  +S G+QP+ HPDS  LLTS   I  AW  HY RLA D
Sbjct:   33 LKVATLNINGVKSKKIQLQRVLAMYRINCIALQETTLTVTDWALNVPGYRTFAVYGERTSSTRGAAILLRNKMGAQTVGKSSPWHTFVRCY------------------GLGKVPLRTVRNQMRDLRVKYPNDSIILMGDFNRLRPRVEQWFNCAYES-IRVWELTGKDADLGTRDHGSKRVIDHIMTSLAHPQDTLRAPRVLRKVDISDHYPVVSTFRSDRADASTGDSVGVPINARTIQRGERINTGLIPMPGTHWYQESGPRGRANHQKVIHANYWEPLADLIEEGNEELSPEDTTALVDAAASRMVEASHQVARECGQTKDSSTQRAPALKPQIARAIDDRGRLYRAAKRLRKNSPRAKVAWERYHEARMKAERLVRKDRRRAWTKALCTASEQLRSDPKAAWHFMSAVAGWKRKDSSGGLQPVQHPDSRALLTSANDISAAWRTHYQRLAAD 470          
BLAST of mRNA_H-paniculata_contig34123.9116.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO)

HSP 1 Score: 81.3 bits (199), Expect = 1.290e-12
Identity = 97/363 (26.72%), Postives = 153/363 (42.15%), Query Frame = 0
Query:  103 TVYIPHRGTGDKPVGAILKDIAEVRRKYPNDSIAIMGDWNQTKNRVNKALAK-KVDPELQINEPRNAEFGTRNKTNR----CIDHIAT----LCNSTCETGRAAILRRVDLSDHFPVVC----MVGCSNEVA-PPLDLKTQSTRPRIDVRKLPRPETKKYCGKGP-EGRTNHFNVIGSNYWAPLVDLLETQEDGWDKSE---IQAKADASAEKLVSTCHTLANDYNLVNPGTGGNQKLKSHIAKAIDQKEKTYERAMRTKLGSEKSQRRWKRYHQLRRKVKQLVKQDAKHRWARTLVKVSNQMVDDP--REFWKWSSNLAGWRQATASYGVQPMCHPDSGELLTSVPHIRDAWAVHYGRLATD 445
            +VY+P    G+     + +++A++R K+P D+I + GDWN  + +++  L + +  P+ +   PR+A    R    R     IDH       +  S        +    D SDHFPV      +VG S E   PPL L+      R+ VR +P+P      G  P E  T   + + +N +A L    +   +G    E   I A AD   + + ST   +           G    L+  I  AI ++   +    +   G  +S     RY   R +VK +V+ + + + AR + K  N        R FWKW+ ++A      ++   QP+  P SG L T    I   WA HY  L  D
Sbjct:   13 SVYLPTGSQGEPYRCRLREELAQLREKFPRDTIVVGGDWNLDEAQLDALLRRWRCVPDAKTIWPRDASARVRGTCRRGSCRVIDHFVAWPPVMGPSLSFPHSVFVDYSWDTSDHFPVFASVPRLVGDSFEHPHPPLMLE------RLSVRSIPKPAR----GDPPSEWPTPFRDFVTANPFAILAPPNDEPMEGAMSREPDSIDADADGFVQAVWSTARRVGAVSRTRRKSLG--PPLQRSILGAIARRRHAFLALCQEARGPIQSVA-LDRYIAARLRVKNMVRTNRRRQKARAIDKAINDFRQGGGRRGFWKWARSIAKGHPTQSNRAEQPVHDPTSGVLHTEPGEINACWARHYRELLRD 362          
BLAST of mRNA_H-paniculata_contig34123.9116.1 vs. uniprot
Match: F8P613_SERL9 (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Serpula lacrymans var. lacrymans TaxID=341189 RepID=F8P613_SERL9)

HSP 1 Score: 67.0 bits (162), Expect = 3.550e-8
Identity = 62/230 (26.96%), Postives = 103/230 (44.78%), Query Frame = 0
Query:    5 TLNINGVKGKLTQLQRLLEREDLACCALQETLLRPTDWRLKVPGYQSFSACGGNVASTRGVSLLVKKQFSAYTVGKG-----SAWHLLVRCFGSGLT---QPWIVGTVYIPHRGTGDKPVGAILKDIAE----VRRKYPNDSIAIMGDWNQTKNRVNKALAKKVDPELQ---INEP--RNAEFGTRNKTNRCIDHIATLCNSTCETGRAAILRRVDLSDHFPVVCMVGCS 217
            TLNING + K   +Q +L+   +A CALQETL+ PT + L++ GY SF +    V   RG +LL+     AY + +      S    ++    SGL    +P      Y+P  G         L+ I +    +  K P   +  +GD N     +++ L +K +  ++   +  P  R   +GT     + IDHI     +     +  ++R   +SDH P++  +  S
Sbjct:  210 TLNINGFQKKKELVQDVLQTNRIAVCALQETLVAPTHFPLRIDGYNSFVSPW--VEGFRGQALLIDLSLPAYEIPRAKPDTPSGGRYVIHVKVSGLRDIKRPVHFLAAYLPSGGNFRLERKFALQSIVDRFDHILEKDPGALVVCLGDLNIDHETLDRRLKRKTNNVIRLPPVGSPLSRFPIWGTA----KAIDHILASPQAYNLLRKPRVIRSDCISDHRPLISHIRSS 433          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34123.9116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L5H7_9PHAE3.230e-8738.07Reverse transcriptase domain-containing protein n=... [more]
A0A7S1SJ55_9CHLO1.290e-1226.72Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
F8P613_SERL93.550e-826.96Endo/exonuclease/phosphatase domain-containing pro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 1..215
e-value: 1.3E-18
score: 69.3
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 1..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig34123contigH-paniculata_contig34123:34..1368 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig34123.9116.1mRNA_H-paniculata_contig34123.9116.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig34123 34..1368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig34123.9116.1 ID=prot_H-paniculata_contig34123.9116.1|Name=mRNA_H-paniculata_contig34123.9116.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=445bp
MKLGTLNINGVKGKLTQLQRLLEREDLACCALQETLLRPTDWRLKVPGYQ
SFSACGGNVASTRGVSLLVKKQFSAYTVGKGSAWHLLVRCFGSGLTQPWI
VGTVYIPHRGTGDKPVGAILKDIAEVRRKYPNDSIAIMGDWNQTKNRVNK
ALAKKVDPELQINEPRNAEFGTRNKTNRCIDHIATLCNSTCETGRAAILR
RVDLSDHFPVVCMVGCSNEVAPPLDLKTQSTRPRIDVRKLPRPETKKYCG
KGPEGRTNHFNVIGSNYWAPLVDLLETQEDGWDKSEIQAKADASAEKLVS
TCHTLANDYNLVNPGTGGNQKLKSHIAKAIDQKEKTYERAMRTKLGSEKS
QRRWKRYHQLRRKVKQLVKQDAKHRWARTLVKVSNQMVDDPREFWKWSSN
LAGWRQATASYGVQPMCHPDSGELLTSVPHIRDAWAVHYGRLATD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf