prot_H-paniculata_contig3401.9089.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3401.9089.1
Unique Nameprot_H-paniculata_contig3401.9089.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
BLAST of mRNA_H-paniculata_contig3401.9089.1 vs. uniprot
Match: A0A6H5LB33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB33_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 6.200e-12
Identity = 31/64 (48.44%), Postives = 45/64 (70.31%), Query Frame = 0
Query:    4 YADSEYAACPDSRRSVSSGTVLLLEGGAICWYSRTQEVAAAGTSEAEYVALAEIVNEVLFPRHV 67
            YAD+++A+    RRSVS G ++   GGA+ W+SRTQ+     T+EAEYVAL ++V E+LF R +
Sbjct:   30 YADADFASKAADRRSVSGG-IVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQI 92          
BLAST of mRNA_H-paniculata_contig3401.9089.1 vs. uniprot
Match: A0A6H5JI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI51_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.440e-11
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 0
Query:    1 MLTYADSEYAACPDSRRSVSSGTVLLLEGGAICWYSRTQEVAAAGTSEAEYVALAEIVNEVLFPRHV 67
            +  YAD+++A+    RRSVS G ++   GGA+ W+SRTQ+     T+EAEYVAL ++V E+LF R +
Sbjct:   27 LQVYADADFASKAADRRSVSGG-IVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQI 92          
BLAST of mRNA_H-paniculata_contig3401.9089.1 vs. uniprot
Match: A0A6H5JWK8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK8_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 2.320e-11
Identity = 32/67 (47.76%), Postives = 49/67 (73.13%), Query Frame = 0
Query:    1 MLTYADSEYAACPDSRRSVSSGTVLLLEGGAICWYSRTQEVAAAGTSEAEYVALAEIVNEVLFPRHV 67
            ++T+AD++YA+    RRSVS G V++  GGAI W+S+TQ+     T++AEYVA+A++  E+LF R V
Sbjct:  230 LITFADADYASRAADRRSVSGG-VVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLREV 295          
BLAST of mRNA_H-paniculata_contig3401.9089.1 vs. uniprot
Match: A0A6H5JR13_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR13_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 2.530e-11
Identity = 32/67 (47.76%), Postives = 49/67 (73.13%), Query Frame = 0
Query:    1 MLTYADSEYAACPDSRRSVSSGTVLLLEGGAICWYSRTQEVAAAGTSEAEYVALAEIVNEVLFPRHV 67
            ++T+AD++YA+    RRSVS G V++  GGAI W+S+TQ+     T++AEYVA+A++  E+LF R V
Sbjct:  534 LITFADADYASRAADRRSVSGG-VVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLRQV 599          
BLAST of mRNA_H-paniculata_contig3401.9089.1 vs. uniprot
Match: A0A6H5JTT9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT9_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 2.610e-11
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0
Query:    1 MLTYADSEYAACPDSRRSVSSGTVLLLEGGAICWYSRTQEVAAAGTSEAEYVALAEIVNEVLFPRHV 67
            M  + D++YA+    RRSVS G V+   GG + W+SRTQ+     T+EAEYVA+A+++ EVLF R V
Sbjct:   15 MQVFVDADYASKAADRRSVSGGLVMC-GGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQV 80          
BLAST of mRNA_H-paniculata_contig3401.9089.1 vs. uniprot
Match: A0A0J7K651_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K651_LASNI)

HSP 1 Score: 66.6 bits (161), Expect = 3.490e-11
Identity = 29/67 (43.28%), Postives = 47/67 (70.15%), Query Frame = 0
Query:    1 MLTYADSEYAACPDSRRSVSSGTVLLLEGGAICWYSRTQEVAAAGTSEAEYVALAEIVNEVLFPRHV 67
            ++ ++DS+YA+CPD+R+S+SS  VL+   G + W SR Q + A  T++AEYVA+ E   EV++ R +
Sbjct: 1150 LVAFSDSDYASCPDTRKSISS-VVLMFNNGPVIWSSRKQSIVATSTTDAEYVAMCEAAKEVVWIRRL 1215          
BLAST of mRNA_H-paniculata_contig3401.9089.1 vs. uniprot
Match: A0A6H5JUW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUW6_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 3.670e-11
Identity = 31/64 (48.44%), Postives = 45/64 (70.31%), Query Frame = 0
Query:    4 YADSEYAACPDSRRSVSSGTVLLLEGGAICWYSRTQEVAAAGTSEAEYVALAEIVNEVLFPRHV 67
            YAD+++A+    RRSVS G ++   GGA+ W+SRTQ+     T+EAEYVAL ++V E+LF R +
Sbjct:   60 YADADFASKAADRRSVSGG-IVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQI 122          
BLAST of mRNA_H-paniculata_contig3401.9089.1 vs. uniprot
Match: A0A6H5KL46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL46_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 3.900e-11
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0
Query:    1 MLTYADSEYAACPDSRRSVSSGTVLLLEGGAICWYSRTQEVAAAGTSEAEYVALAEIVNEVLFPRHV 67
            M  + D++YA+    RRSVS G V+  EG  + W+SRTQ+     T+EAEYVA+A+++ EVLF R V
Sbjct:   15 MQVFVDADYASKAADRRSVSGGLVMC-EGVCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQV 80          
BLAST of mRNA_H-paniculata_contig3401.9089.1 vs. uniprot
Match: A0A6H5KN59_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN59_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 4.700e-11
Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = 0
Query:    2 LTYADSEYAACPDSRRSVSSGTVLLLEGGAICWYSRTQEVAAAGTSEAEYVALAEIVNEVLFPRHV 67
            L YAD+++A+    RRSVS G ++   GGA+ W+SRTQ+     T+EAEYVAL ++V E+LF R +
Sbjct:  560 LGYADADFASKAADRRSVSGG-IVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQI 624          
BLAST of mRNA_H-paniculata_contig3401.9089.1 vs. uniprot
Match: A0A6H5KIL0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIL0_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 4.750e-11
Identity = 31/67 (46.27%), Postives = 48/67 (71.64%), Query Frame = 0
Query:    1 MLTYADSEYAACPDSRRSVSSGTVLLLEGGAICWYSRTQEVAAAGTSEAEYVALAEIVNEVLFPRHV 67
            ++T+ D++YA+    RRSVS G V++  GGAI W+S+TQ+     T++AEYVA+A++  E+LF R V
Sbjct:  911 LITFVDADYASVAADRRSVSGG-VVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLRQV 976          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3401.9089.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LB33_9PHAE6.200e-1248.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JI51_9PHAE1.440e-1146.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWK8_9PHAE2.320e-1147.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JR13_9PHAE2.530e-1147.76Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JTT9_9PHAE2.610e-1147.76Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A0J7K651_LASNI3.490e-1143.28Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=677... [more]
A0A6H5JUW6_9PHAE3.670e-1148.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL46_9PHAE3.900e-1147.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN59_9PHAE4.700e-1148.48Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KIL0_9PHAE4.750e-1146.27Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..67
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 2..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3401contigH-paniculata_contig3401:4834..5043 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3401.9089.1mRNA_H-paniculata_contig3401.9089.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3401 4834..5181 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3401.9089.1 ID=prot_H-paniculata_contig3401.9089.1|Name=mRNA_H-paniculata_contig3401.9089.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
MLTYADSEYAACPDSRRSVSSGTVLLLEGGAICWYSRTQEVAAAGTSEAE
YVALAEIVNEVLFPRHVQI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like