mRNA_H-paniculata_contig33812.9037.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig33812.9037.1 vs. uniprot
Match: A0A6H5JMZ8_9PHAE (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ8_9PHAE) HSP 1 Score: 130 bits (328), Expect = 2.100e-33 Identity = 69/87 (79.31%), Postives = 80/87 (91.95%), Query Frame = 1
Query: 10 RVGQSPDSVRMLVKEGFRIVVESGAGASASFTDAAYDDAGATVVEGVEAWKSDIVVKVNPPTPEEAALVENRTLISLLFPAQNGELV 270
RVGQSP SVRML KEGF +VVESGAGA+ASFTD AY++AGATVV+G EAWK+DIVV +PP+PEEAALVE+RTLISLLFPAQ+G+LV
Sbjct: 125 RVGQSPASVRMLTKEGFGVVVESGAGAAASFTDEAYEEAGATVVKGSEAWKADIVV--DPPSPEEAALVEDRTLISLLFPAQSGDLV 209
BLAST of mRNA_H-paniculata_contig33812.9037.1 vs. uniprot
Match: D8LSE0_ECTSI (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE0_ECTSI) HSP 1 Score: 120 bits (302), Expect = 6.720e-30 Identity = 61/77 (79.22%), Postives = 71/77 (92.21%), Query Frame = 1
Query: 40 MLVKEGFRIVVESGAGASASFTDAAYDDAGATVVEGVEAWKSDIVVKVNPPTPEEAALVENRTLISLLFPAQNGELV 270
ML K+GF +VV+SGAGA+ASFTD AY++AGATVV+G EAWK+DIVVKV PPTPEEAALVE RTLISLLFPAQ+G+LV
Sbjct: 1 MLTKDGFGVVVQSGAGAAASFTDEAYEEAGATVVKGSEAWKADIVVKVEPPTPEEAALVEARTLISLLFPAQSGDLV 77
BLAST of mRNA_H-paniculata_contig33812.9037.1 vs. uniprot
Match: A0A7S2GVT9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GVT9_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.970e-24 Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 1
Query: 10 RVGQSPDSVRMLVKEGFRIVVESGAGASASFTDAAYDDAGATVVEGVEAWKSDIVVKVNPPTPEEAALVENRTLISLLFPAQNGELV 270
RVGQSP+S+ LVK GF + VE GAG SA+ +DA Y+ GAT+V+ WKSDI+ K++PPT EEAAL+ENR LIS++ P N EL+
Sbjct: 97 RVGQSPESIAKLVKAGFSVKVEEGAGTSAAISDALYEAVGATIVDHASVWKSDIITKIHPPTLEEAALLENRMLISMIQPQLNEELM 183
BLAST of mRNA_H-paniculata_contig33812.9037.1 vs. uniprot
Match: A0A7S0E4I4_9EUKA (Proton-translocating NAD(P)(+) transhydrogenase (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E4I4_9EUKA) HSP 1 Score: 103 bits (257), Expect = 8.070e-24 Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 1
Query: 10 RVGQSPDSVRMLVKEGFRIVVESGAGASASFTDAAYDDAGATVVEGVEAWKSDIVVKVNPPTPEEAALVENRTLISLLFPAQNGELV 270
RV QSPDSV +LVK F++VVE GAGA+A F+D Y++ GAT+V EAWKSDI++K+NPP+ EA LV +RTLIS + P+ N L+
Sbjct: 88 RVAQSPDSVALLVKANFKVVVEKGAGAAAEFSDDQYEEVGATIVSSAEAWKSDIIIKINPPSSGEAKLVGDRTLISQINPSNNAALL 174
BLAST of mRNA_H-paniculata_contig33812.9037.1 vs. uniprot
Match: A0A7S3STK5_EMIHU (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3STK5_EMIHU) HSP 1 Score: 101 bits (251), Expect = 5.220e-23 Identity = 53/87 (60.92%), Postives = 66/87 (75.86%), Query Frame = 1
Query: 10 RVGQSPDSVRMLVKEGFRIVVESGAGASASFTDAAYDDAGATVVEGVEAWKSDIVVKVNPPTPEEAALVENRTLISLLFPAQNGELV 270
RVGQ+P+SV LVKEG + VE+GAGA+A F+DAAY+ AGA+VV EAW + +V KV PPT EEA LV +R L+S +FPAQN LV
Sbjct: 51 RVGQTPESVAKLVKEGITVKVEAGAGAAADFSDAAYEKAGASVVSRDEAWGASLVTKVMPPTEEEAKLVGDRMLLSFVFPAQNDALV 137
BLAST of mRNA_H-paniculata_contig33812.9037.1 vs. uniprot
Match: A0A7S2LQP6_9STRA (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LQP6_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.810e-22 Identity = 51/88 (57.95%), Postives = 67/88 (76.14%), Query Frame = 1
Query: 10 RVGQSPDSVRMLVKEGFRIVVESGAGASASFTDAAYDDAGATVVEGVEAWK-SDIVVKVNPPTPEEAALVENRTLISLLFPAQNGELV 270
RV +P+SV LVK GF +++E GAG+S+ F+DA Y AGA +VE E WK SDIV+K+ PPT EEA+ +E+RTLIS ++PAQN ELV
Sbjct: 66 RVAATPESVSKLVKPGFNVLIEKGAGSSSHFSDAEYASAGAKIVEAEEVWKNSDIVMKLRPPTTEEASKLEDRTLISFIYPAQNKELV 153
BLAST of mRNA_H-paniculata_contig33812.9037.1 vs. uniprot
Match: F0YIC9_AURAN (Proton-translocating NAD(P)(+) transhydrogenase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIC9_AURAN) HSP 1 Score: 99.4 bits (246), Expect = 2.470e-22 Identity = 52/88 (59.09%), Postives = 69/88 (78.41%), Query Frame = 1
Query: 7 NRVGQSPDSVRMLVKEGFRIVVESGAGASASFTDAAYDDAGATVVEGVEAWKSDIVVKVNPPTPEEAALVENRTLISLLFPAQNGELV 270
NRV Q+P+S+ L+K GF +VVE+GAGA+A F DA Y AGA VV+ +AW +DIV KVNPPT +EAA + +RTL+S++ PAQNG+LV
Sbjct: 17 NRVAQTPESLAALLKAGFSVVVEAGAGAAAGFADADYAAAGAAVVD--DAWAADIVTKVNPPTLDEAAKLGDRTLLSMVQPAQNGDLV 102
BLAST of mRNA_H-paniculata_contig33812.9037.1 vs. uniprot
Match: A0A7S0LNL4_9EUKA (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LNL4_9EUKA) HSP 1 Score: 99.0 bits (245), Expect = 3.380e-22 Identity = 50/87 (57.47%), Postives = 64/87 (73.56%), Query Frame = 1
Query: 10 RVGQSPDSVRMLVKEGFRIVVESGAGASASFTDAAYDDAGATVVEGVEAWKSDIVVKVNPPTPEEAALVENRTLISLLFPAQNGELV 270
RV Q+P+SV LVKEGF ++VE GAGASA F D+ Y+DAGA +V EA+K+ ++ KV PT EE L+ENR L+S LFPAQN L+
Sbjct: 53 RVSQTPESVSKLVKEGFSVLVERGAGASADFGDSMYEDAGAKLVSREEAYKASLITKVTVPTSEEVKLIENRMLLSFLFPAQNAPLL 139
BLAST of mRNA_H-paniculata_contig33812.9037.1 vs. uniprot
Match: R1C2S3_EMIHU (Proton-translocating NAD(P)(+) transhydrogenase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C2S3_EMIHU) HSP 1 Score: 97.8 bits (242), Expect = 8.590e-22 Identity = 51/87 (58.62%), Postives = 65/87 (74.71%), Query Frame = 1
Query: 10 RVGQSPDSVRMLVKEGFRIVVESGAGASASFTDAAYDDAGATVVEGVEAWKSDIVVKVNPPTPEEAALVENRTLISLLFPAQNGELV 270
RV QSP+SV +LVK+GFR+VVE GAGA + F D AY +AGATV EAW + V K+NPPT EEA LV +RTL++ + P++N ELV
Sbjct: 54 RVAQSPESVALLVKKGFRVVVEQGAGADSLFGDDAYVEAGATVASREEAWGAHFVTKINPPTREEAKLVGDRTLLAQINPSKNTELV 140
BLAST of mRNA_H-paniculata_contig33812.9037.1 vs. uniprot
Match: B8C9R3_THAPS (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9R3_THAPS) HSP 1 Score: 96.3 bits (238), Expect = 2.980e-21 Identity = 48/88 (54.55%), Postives = 66/88 (75.00%), Query Frame = 1
Query: 10 RVGQSPDSVRMLVKEGFRIVVESGAGASASFTDAAYDDAGATVVEGVEAWK-SDIVVKVNPPTPEEAALVENRTLISLLFPAQNGELV 270
RV +P+SV LVK GF +++E GAG+S+ F+DA Y+ AGA +VE + WK SDIV+K+ PPT EE ++NRT+IS L+PAQN EL+
Sbjct: 74 RVAATPESVSKLVKPGFNVLIEKGAGSSSYFSDADYESAGAKIVEADQVWKESDIVMKLRPPTKEELTQLDNRTIISFLYPAQNPELL 161 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33812.9037.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig33812.9037.1 >prot_H-paniculata_contig33812.9037.1 ID=prot_H-paniculata_contig33812.9037.1|Name=mRNA_H-paniculata_contig33812.9037.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp NLNRVGQSPDSVRMLVKEGFRIVVESGAGASASFTDAAYDDAGATVVEGVback to top mRNA from alignment at H-paniculata_contig33812:481..1374- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig33812.9037.1 ID=mRNA_H-paniculata_contig33812.9037.1|Name=mRNA_H-paniculata_contig33812.9037.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=894bp|location=Sequence derived from alignment at H-paniculata_contig33812:481..1374- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig33812:481..1374- >mRNA_H-paniculata_contig33812.9037.1 ID=mRNA_H-paniculata_contig33812.9037.1|Name=mRNA_H-paniculata_contig33812.9037.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=540bp|location=Sequence derived from alignment at H-paniculata_contig33812:481..1374- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |