prot_H-paniculata_contig3373.9015.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3373.9015.1
Unique Nameprot_H-paniculata_contig3373.9015.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length547
Homology
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BLAST of mRNA_H-paniculata_contig3373.9015.1 vs. uniprot
Match: A0A6H5K364_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K364_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 2.080e-28
Identity = 71/110 (64.55%), Postives = 82/110 (74.55%), Query Frame = 0 
Query:  445 DGLSARENALMRDNTRRIT------PTLIKRPPGGPFGASKARAWHAQQVVQSAVTPMQAMRAVLDRPLRSNYVTVSTAINRVAKLSAERSPPG-LRGEQERQHLGVLLK 547
            + L    N   R   RR        P L +RPPGGPFGASKA AWHAQQVVQSAVTP+QAMRAVLDRPLRSNYV+VSTA+NRVAKL+A R   G L+GE+E ++LG+LLK
Sbjct:  203 ESLREEANQGRRGGARRAVRGRVSPPPLKRRPPGGPFGASKAVAWHAQQVVQSAVTPLQAMRAVLDRPLRSNYVSVSTALNRVAKLAASRRRGGGLKGEEEPKYLGILLK 312
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3373.9015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K364_9PHAE2.080e-2864.55Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..547
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..39
NoneNo IPR availableTMHMMTMhelixcoord: 25..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3373contigH-paniculata_contig3373:12841..16849 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3373.9015.1mRNA_H-paniculata_contig3373.9015.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3373 12766..16849 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3373.9015.1 ID=prot_H-paniculata_contig3373.9015.1|Name=mRNA_H-paniculata_contig3373.9015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=547bp
MVCHQQPPSQNCCELITMGRIRIMYVVVVMVCLLVSLGLPSGHAALAGGA
SIPWRTGAEVLRLSRPSTATPSGFACHRTCSISRGGSRERSANKPRTCPI
GGGGGDGSSCFRFREHRGGGRACTFVRGEGGSGVGSQGSDRRQSERVPTP
TFQQETPRSRFRVPGDGNIPLEAAGKLQEAPSTNADYTVIAANPASTAIR
TPNEIATTSRAKVGVTARGKTSRDPAYKDNGTSDGFIEDVSSLARSTNPL
QSESDMLDNDTSQWNSLLQKRLLQKLSKPGRKARGASPSHSSTPAAAATA
AAARERKLPSPGLTADEIVPATTSDAVVGEANEKVSSSNGNICFTSPAIN
IAASASAATADHTEEIHQRYSDICATEKAGKKKRKRRSETDTVSVQRKSP
RNDVASSREDETALSRDSLRGSNTDPERTALERGKKHGDACSGSDGLSAR
ENALMRDNTRRITPTLIKRPPGGPFGASKARAWHAQQVVQSAVTPMQAMR
AVLDRPLRSNYVTVSTAINRVAKLSAERSPPGLRGEQERQHLGVLLK
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