prot_H-paniculata_contig3371.9010.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3371.9010.1
Unique Nameprot_H-paniculata_contig3371.9010.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length239
Homology
BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: D7FSF3_ECTSI (PsbP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF3_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 4.540e-81
Identity = 115/178 (64.61%), Postives = 137/178 (76.97%), Query Frame = 0
Query:   61 RVNFLRTTAYVLTTAAAGLAVLPPPSNAGVFVDDTLGFQFETPEGWERGETQISGRRKIIVYTSPNDPSANAFVAYTPVRGDFTSLGSFGTLDEVSKTILPGGEGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLWLLFPEEGQLATITAQCNEEDYGRLGKAVDGLIASIKKK 238
            R++FLR           G A+LP   NA  F DD LGF F+ P+GWER + +ISGRRKI+VYTSP  P ANAFVAYTP RGDFT+LGSFGTLDEVSKT+LP   GV S ++++YT   SYVYDYIV Q+GRPEKHIKT+W+LFPE+GQLATITAQCNE DY ++GK +D LIAS+ KK
Sbjct:   52 RLDFLRGAXXXXXXXXXGFALLPAAGNAQTFTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSPTTPGANAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASGVSSRMLESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQLATITAQCNESDYAKVGKTIDSLIASVTKK 229          
BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: A0A835ZDA3_9STRA (PsbP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDA3_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.620e-48
Identity = 79/156 (50.64%), Postives = 110/156 (70.51%), Query Frame = 0
Query:   77 AGLAVLPPPSNAG---VFVDDTLGFQFETPEGWERGETQISGRRKIIVYTSPNDPSANAFVAYTPVRGDFTSLGSFGTLDEVSKTILPGGEGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLWLLFPEEGQLATITAQCNEEDYGRLGKAVD 229
            AG A L  P+ A     +VDD   F+FE P GW + ET+ISGRRK++++TS  D SANAF+A TPVRGDFTSLGSFGT DEVS+T++P G+G+   +++  ++N  Y YDYI+ Q+GRPEKH+K++W +   +  L T+TAQC+E +Y      +D
Sbjct:    1 AGTAALALPALAAGTTEYVDDKFKFRFEVPAGWTQTETEISGRRKVVIWTS--DGSANAFIAVTPVRGDFTSLGSFGTADEVSQTLIPNGKGISGEMLNVKSKNSMYYYDYIIAQEGRPEKHLKSVWSVVSGDA-LVTLTAQCDEANYPAYASQMD 153          
BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: A0A6V1S113_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S113_HETAK)

HSP 1 Score: 146 bits (368), Expect = 7.630e-40
Identity = 69/158 (43.67%), Postives = 102/158 (64.56%), Query Frame = 0
Query:   82 LPPPSNAGVFVDDTLG-FQFETPEGWERGETQISGRRKIIVYTSPNDPSANAFVAYTPVRGDFTSLGSFGTLDEVSKTILPGGEGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLWLLFPEEGQ--LATITAQCNEEDYGRLGKAVDGLIASIK 236
            LP  +   + V DT G + F+ P GWE+ E  ISG R + ++ +P  P+ANAFVA TP+RGD+TSLGSFG LD V  T++P G G++S  +++ ++  +Y YDY V Q+GRPEK +KT++ + P+E    L T TAQC+  DY   G  +  + +S +
Sbjct:   69 LPAVAEDLMKVTDTKGAYSFQVPPGWEKSEAAISGGRTVTIFAAPGRPAANAFVAATPLRGDYTSLGSFGNLDYVESTVVPKGPGIESRCLESRSQRGTYFYDYTVKQEGRPEKRLKTIFAVVPDEFSPVLVTFTAQCDVADYEEYGTLLSAIASSFE 226          
BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: A0A7S4EZ64_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EZ64_CHRCT)

HSP 1 Score: 128 bits (321), Expect = 7.130e-33
Identity = 61/164 (37.20%), Postives = 95/164 (57.93%), Query Frame = 0
Query:   85 PSNAGVFVDDTLGFQFETPEGWERGETQISGRRKIIVYTSPNDPSANAFVAYTPVRGDFTSLGSFGTLDEVSKTILPG---------GEGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLWLLFPEEGQ---LATITAQCNEEDYGRLGKAVDGLIASIK 236
            P+ A  +VD   G  F  P GW   E+++SG RK++  T P D   N FVA+TP+RGD+TSLGSFG +D V  TILP           +G++  ++   T   +Y++DY++ Q G+P + ++TL+ +   EG+   L T+TAQC +E Y  L   +  ++ S +
Sbjct:   59 PTAANEYVDQEYGVSFVVPSGWSPEESELSGGRKLLAATDPADTDFNLFVAFTPIRGDYTSLGSFGNIDFVGSTILPQCPNGACTLETDGIRGKMIAQSTGRGAYIFDYLIEQTGQPSRRLRTLFSVQTVEGRGQNLITLTAQCRQERYDELSTTLREIVDSFR 222          
BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: A0A7S4JNE5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JNE5_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.570e-27
Identity = 64/172 (37.21%), Postives = 96/172 (55.81%), Query Frame = 0
Query:   79 LAVLPPPSNAGVFVDDTLGFQFETPEGWERGETQISGRRKIIVYTSPN---DPSANAFVAYTPVRGDFTSLGSFGTLDEVSK-TILP----GGEGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLWLLFPEE-----GQLATITAQCNEEDYGRLGKAVDGLIASIKK 237
            LA+    +    FVD   GFQ   P GWER E  ++ RRKI ++  P+   D     F+AYTPVR DFT LGSFG++D+V++ TI+P     GE   S++++A ++  +Y++DY+     +PE+H +T++ L           L T+TAQ  E  YG +    D +I S  K
Sbjct:   74 LAIADSGAKLEPFVDKECGFQILVPVGWERTEQSLADRRKINLFVDPSSGDDDKTILFIAYTPVRDDFTQLGSFGSVDQVAQMTIMPKGNIAGEETVSSMINAESKKNAYIFDYMSKVPKQPERHFRTIFTLAQGATGGAGSVLVTLTAQTPESRYGEMKGVFDEMIDSYGK 245          
BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: B7FU11_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FU11_PHATC)

HSP 1 Score: 112 bits (280), Expect = 7.950e-27
Identity = 72/187 (38.50%), Postives = 107/187 (57.22%), Query Frame = 0
Query:   72 LTTAAAGLAVLPPPSNAGV-------FVDDTLGFQFETPEGWERGETQISGRRKIIVYTSPNDPSANAFVAYTPVRGDFTSLGSFGTLDEVS-KTILP----GGEGVKSTLVDAYTRNKSYVYDYI-VTQDGRPEKHIKTLWLLFPEEGQ-------LATITAQCNEEDYGRLGKAV-DGLIASIKK 237
            L T A+  AV  P +   V       F+D   GF  + P  W R E Q+S RR I+V+T P D  A+ FVAYTPVR DFTSLGSFG++D+V+ +TILP     G  V++T++ A ++ ++Y +DY     + +P  H +T++ L  ++G        L T+TAQC EE Y    +++ D ++ S  K
Sbjct:   37 LATCASAAAVGFPSTAVAVSVPTLTPFLDSRHGFTVDVPSQWSRTEQQLSDRRTIVVWTDPADARASVFVAYTPVRDDFTSLGSFGSVDQVAAQTILPKAQIAGVDVEATMLAAVSQKQAYFFDYRQAVPNVQPPTHFRTIFTL--QQGATGGAGAVLVTLTAQCPEELYATKYQSLFDSILDSYAK 221          
BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: A0A7R9ZSX9_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZSX9_9STRA)

HSP 1 Score: 110 bits (275), Expect = 6.190e-26
Identity = 77/217 (35.48%), Postives = 114/217 (52.53%), Query Frame = 0
Query:   37 SASNTRCHATNSPRPTQQG-DVPAARVN---FLRTTAYVLTTAAAGLAVLPPPSNAGVFVDDTLGFQFETPEGWERGETQISGRRKIIVYTSPNDPSANAF-VAYTPVRGDFTSLGSFGTLDEVSKT-ILPGG----EGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLWLLFPEE-----GQLATITAQCNEEDYGRLGKAVDGLIASIKKK 238
            SASN    A +SP   Q G D   +++    +L +TA ++  AAA         +   + D    F  + P GW+  E +++ RRKI +Y  PN      F +A+TPVR DFTSLGSFG++D+V++T ILP G    E   ST++ A ++N +Y +DY     G+PE H +T++ L           L ++TAQC E DY       D ++ S K K
Sbjct:   24 SASN--LPAVSSPNALQSGLDDETSKITRRGWLSSTAGLVVGAAAFAPSAFAEDDLKDYKDPDCKFSIKVPAGWDFSEQELADRRKIKLYLEPNSNRKTLFFMAFTPVRDDFTSLGSFGSVDQVAQTTILPKGKIMGEENSSTMLSAESKNSAYFFDYKQKVSGQPETHFRTIFSLANGATGGAGAVLVSLTAQCPEADYDAFKPLFDSMMTSYKAK 238          
BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: A0A7S2GEP3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GEP3_9STRA)

HSP 1 Score: 110 bits (276), Expect = 6.610e-26
Identity = 70/193 (36.27%), Postives = 105/193 (54.40%), Query Frame = 0
Query:   56 DVPAAR--VNFLRTTAYVLTTAAAGLAVLPPPSNAGV----FVDDTLGFQFETPEGWERGETQISGRRKIIVYTSPNDPSANAFVAYTPVRGDFTSLGSFGTLDEVSKTILP-------GGEGVKSTLVDAYTRNKSYVYDYIVTQDG-RPEKHIKTLWLLFPEEGQLATITAQCNEEDYGRLGKAVDGLIAS 234
            D+PAA   +N    +A +L+  A G A  P  S A      + D T G  F+ P GW++ ET +SG RK++VY  P D + NAFV +TP+  D+TSLGSFG +D VS+ ++P       G    K+ L++A     +Y ++Y +  D  +P +H  T W + P E  L T +AQ  EE + +  +A   L+ S
Sbjct:   54 DLPAALEPINRRDISATILSALAIG-ASFPAISRADDTLQNYKDLTYGATFDVPSGWQKTETNLSGDRKLVVYVDPKDDNTNAFVLFTPIAADYTSLGSFGNIDYVSRIVVPPQTKGFDGSALEKTNLIEAKQAKGNYFFEYTIQPDDTQPNRHFFTYWSVVPGEC-LVTFSAQSTEELF-QTSEATRKLLKS 243          
BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: A0A7S1XXW5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXW5_9STRA)

HSP 1 Score: 106 bits (265), Expect = 3.610e-25
Identity = 64/168 (38.10%), Postives = 91/168 (54.17%), Query Frame = 0
Query:   80 AVLPPPSNAGVFVDDTLGFQFE-----TPEGWERGETQIS-GRRKIIVYTSPNDPSANAFVAYTPVRGDFTSLGSFGTLDEVSKTILPGGEGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLWLLFPEEG-----QLATITAQCNEEDYGRLGKA-VDGLIASI 235
            A+ P  + A    + T+ FQ +      P  W R E   + G+   + Y SP   S NA +AYTPVRGDFTSLGSFGT+ +V K ILP     +     A   NK+YV+DY+V   G P +H+KTL+ L P+        + ++TAQ  E D+    +A +DG++ S 
Sbjct:    1 ALAPGAAPAARAAEATVLFQEKRVSVAVPGDWRRQEAPAAAGQIPAVAYLSPRGASFNAVLAYTPVRGDFTSLGSFGTIKDVEKFILPDNVNGRMISAKATRSNKAYVFDYVVEAPGAPVRHLKTLFALVPQNKATDIPSIISLTAQVLESDFNSGVEATMDGILDSF 168          
BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: A0A1E7FR83_9STRA (PsbP domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FR83_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.360e-24
Identity = 58/158 (36.71%), Postives = 87/158 (55.06%), Query Frame = 0
Query:   91 FVDDTLGFQFETPEGWERGETQISGRRKIIVYTSPN-DPSANAFVAYTPVRGDFTSLGSFGTLDEVSK-TILP-----GGEGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLWLLFPEEGQ-----LATITAQCNEEDYGRLGKAVDGLIASIK 236
            + D+   F  + P  W + E  +  RRKI +Y  P+ D     F+AYTPVR DFT+LGSFG++DEV + TILP     G +GV +T++ A  + ++Y +DY+ T   +P+ H +T++ L  E        L TIT Q  E DY  +      ++ S K
Sbjct:   81 YKDEACKFSIDVPSDWIKNENTLPDRRKIDIYFKPDSDQKTLMFIAYTPVRSDFTTLGSFGSVDEVGQSTILPKSDLMGKDGVDATMLSAVAKKQAYFFDYVQTVPSQPKTHFQTIFSLAVEANGGKGNVLVTITVQAPEADYDSMKPLFTKILDSYK 238          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSF3_ECTSI4.540e-8164.61PsbP domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835ZDA3_9STRA1.620e-4850.64PsbP domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6V1S113_HETAK7.630e-4043.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4EZ64_CHRCT7.130e-3337.20Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4JNE5_9STRA2.570e-2737.21Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
B7FU11_PHATC7.950e-2738.50Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7R9ZSX9_9STRA6.190e-2635.48Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2GEP3_9STRA6.610e-2636.27Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1XXW5_9STRA3.610e-2538.10Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A1E7FR83_9STRA1.360e-2436.71PsbP domain-containing protein n=1 Tax=Fragilariop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3D3.40.1000.10coord: 86..236
e-value: 8.0E-13
score: 50.6
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 90..234
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 90..234
e-value: 1.0E-13
score: 51.7
NoneNo IPR availablePANTHERPTHR31407FAMILY NOT NAMEDcoord: 66..235
NoneNo IPR availablePANTHERPTHR31407:SF17PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTICcoord: 66..235
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..238
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3371contigH-paniculata_contig3371:13798..17106 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3371.9010.1mRNA_H-paniculata_contig3371.9010.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3371 13754..17591 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3371.9010.1 ID=prot_H-paniculata_contig3371.9010.1|Name=mRNA_H-paniculata_contig3371.9010.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=239bp
MTGVLQLMLVVGVVSCMVVLPTSVKAFIPTTGTIRSSASNTRCHATNSPR
PTQQGDVPAARVNFLRTTAYVLTTAAAGLAVLPPPSNAGVFVDDTLGFQF
ETPEGWERGETQISGRRKIIVYTSPNDPSANAFVAYTPVRGDFTSLGSFG
TLDEVSKTILPGGEGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLW
LLFPEEGQLATITAQCNEEDYGRLGKAVDGLIASIKKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016123Mog1/PsbP_a/b/a-sand
IPR002683PsbP_C