mRNA_H-paniculata_contig3371.9010.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3371.9010.1
Unique NamemRNA_H-paniculata_contig3371.9010.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: D7FSF3_ECTSI (PsbP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF3_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 6.810e-78
Identity = 115/178 (64.61%), Postives = 137/178 (76.97%), Query Frame = 3 
Query:  225 RVNFLRTTAYVLTTAAAGLAVLPPPSNAGVFVDDTLGFQFETPEGWERGETQISGRRKIIVYTSPNDPSANAFVAYTPVRGDFTSLGSFGTLDEVSKTILPGGEGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLWLLFPEEGQLATITAQCNEEDYGRLGKAVDGLIASIKKK 758
            R++FLR           G A+LP   NA  F DD LGF F+ P+GWER + +ISGRRKI+VYTSP  P ANAFVAYTP RGDFT+LGSFGTLDEVSKT+LP   GV S ++++YT   SYVYDYIV Q+GRPEKHIKT+W+LFPE+GQLATITAQCNE DY ++GK +D LIAS+ KK
Sbjct:   52 RLDFLRGAXXXXXXXXXGFALLPAAGNAQTFTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSPTTPGANAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASGVSSRMLESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQLATITAQCNESDYAKVGKTIDSLIASVTKK 229
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BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: A0A835ZDA3_9STRA (PsbP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDA3_9STRA)

HSP 1 Score: 165 bits (418), Expect = 3.180e-46
Identity = 79/156 (50.64%), Postives = 110/156 (70.51%), Query Frame = 3 
Query:  273 AGLAVLPPPSNAG---VFVDDTLGFQFETPEGWERGETQISGRRKIIVYTSPNDPSANAFVAYTPVRGDFTSLGSFGTLDEVSKTILPGGEGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLWLLFPEEGQLATITAQCNEEDYGRLGKAVD 731
            AG A L  P+ A     +VDD   F+FE P GW + ET+ISGRRK++++TS  D SANAF+A TPVRGDFTSLGSFGT DEVS+T++P G+G+   +++  ++N  Y YDYI+ Q+GRPEKH+K++W +   +  L T+TAQC+E +Y      +D
Sbjct:    1 AGTAALALPALAAGTTEYVDDKFKFRFEVPAGWTQTETEISGRRKVVIWTS--DGSANAFIAVTPVRGDFTSLGSFGTADEVSQTLIPNGKGISGEMLNVKSKNSMYYYDYIIAQEGRPEKHLKSVWSVVSGDA-LVTLTAQCDEANYPAYASQMD 153
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BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: A0A6V1S113_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S113_HETAK)

HSP 1 Score: 144 bits (364), Expect = 2.770e-37
Identity = 69/158 (43.67%), Postives = 102/158 (64.56%), Query Frame = 3 
Query:  288 LPPPSNAGVFVDDTLG-FQFETPEGWERGETQISGRRKIIVYTSPNDPSANAFVAYTPVRGDFTSLGSFGTLDEVSKTILPGGEGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLWLLFPEEGQ--LATITAQCNEEDYGRLGKAVDGLIASIK 752
            LP  +   + V DT G + F+ P GWE+ E  ISG R + ++ +P  P+ANAFVA TP+RGD+TSLGSFG LD V  T++P G G++S  +++ ++  +Y YDY V Q+GRPEK +KT++ + P+E    L T TAQC+  DY   G  +  + +S +
Sbjct:   69 LPAVAEDLMKVTDTKGAYSFQVPPGWEKSEAAISGGRTVTIFAAPGRPAANAFVAATPLRGDYTSLGSFGNLDYVESTVVPKGPGIESRCLESRSQRGTYFYDYTVKQEGRPEKRLKTIFAVVPDEFSPVLVTFTAQCDVADYEEYGTLLSAIASSFE 226
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BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: A0A7S4EZ64_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EZ64_CHRCT)

HSP 1 Score: 126 bits (317), Expect = 1.620e-30
Identity = 61/164 (37.20%), Postives = 95/164 (57.93%), Query Frame = 3 
Query:  297 PSNAGVFVDDTLGFQFETPEGWERGETQISGRRKIIVYTSPNDPSANAFVAYTPVRGDFTSLGSFGTLDEVSKTILPG---------GEGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLWLLFPEEGQ---LATITAQCNEEDYGRLGKAVDGLIASIK 752
            P+ A  +VD   G  F  P GW   E+++SG RK++  T P D   N FVA+TP+RGD+TSLGSFG +D V  TILP           +G++  ++   T   +Y++DY++ Q G+P + ++TL+ +   EG+   L T+TAQC +E Y  L   +  ++ S +
Sbjct:   59 PTAANEYVDQEYGVSFVVPSGWSPEESELSGGRKLLAATDPADTDFNLFVAFTPIRGDYTSLGSFGNIDFVGSTILPQCPNGACTLETDGIRGKMIAQSTGRGAYIFDYLIEQTGQPSRRLRTLFSVQTVEGRGQNLITLTAQCRQERYDELSTTLREIVDSFR 222
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BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: A0A7S4JNE5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JNE5_9STRA)

HSP 1 Score: 112 bits (281), Expect = 3.700e-25
Identity = 64/172 (37.21%), Postives = 96/172 (55.81%), Query Frame = 3 
Query:  279 LAVLPPPSNAGVFVDDTLGFQFETPEGWERGETQISGRRKIIVYTSPN---DPSANAFVAYTPVRGDFTSLGSFGTLDEVSK-TILP----GGEGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLWLLFPEE-----GQLATITAQCNEEDYGRLGKAVDGLIASIKK 755
            LA+    +    FVD   GFQ   P GWER E  ++ RRKI ++  P+   D     F+AYTPVR DFT LGSFG++D+V++ TI+P     GE   S++++A ++  +Y++DY+     +PE+H +T++ L           L T+TAQ  E  YG +    D +I S  K
Sbjct:   74 LAIADSGAKLEPFVDKECGFQILVPVGWERTEQSLADRRKINLFVDPSSGDDDKTILFIAYTPVRDDFTQLGSFGSVDQVAQMTIMPKGNIAGEETVSSMINAESKKNAYIFDYMSKVPKQPERHFRTIFTLAQGATGGAGSVLVTLTAQTPESRYGEMKGVFDEMIDSYGK 245
[Close]
BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: B7FU11_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FU11_PHATC)

HSP 1 Score: 110 bits (276), Expect = 1.070e-24
Identity = 69/170 (40.59%), Postives = 99/170 (58.24%), Query Frame = 3 
Query:  258 LTTAAAGLAVLPPPSNAGV-------FVDDTLGFQFETPEGWERGETQISGRRKIIVYTSPNDPSANAFVAYTPVRGDFTSLGSFGTLDEVS-KTILP----GGEGVKSTLVDAYTRNKSYVYDYI-VTQDGRPEKHIKTLWLLFPEEGQ-------LATITAQCNEEDY 707
            L T A+  AV  P +   V       F+D   GF  + P  W R E Q+S RR I+V+T P D  A+ FVAYTPVR DFTSLGSFG++D+V+ +TILP     G  V++T++ A ++ ++Y +DY     + +P  H +T++ L  ++G        L T+TAQC EE Y
Sbjct:   37 LATCASAAAVGFPSTAVAVSVPTLTPFLDSRHGFTVDVPSQWSRTEQQLSDRRTIVVWTDPADARASVFVAYTPVRDDFTSLGSFGSVDQVAAQTILPKAQIAGVDVEATMLAAVSQKQAYFFDYRQAVPNVQPPTHFRTIFTL--QQGATGGAGAVLVTLTAQCPEELY 204
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BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: A0A7S2GEP3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GEP3_9STRA)

HSP 1 Score: 110 bits (275), Expect = 3.180e-24
Identity = 67/178 (37.64%), Postives = 98/178 (55.06%), Query Frame = 3 
Query:  210 DVPAAR--VNFLRTTAYVLTTAAAGLAVLPPPSNAGV----FVDDTLGFQFETPEGWERGETQISGRRKIIVYTSPNDPSANAFVAYTPVRGDFTSLGSFGTLDEVSKTILP-------GGEGVKSTLVDAYTRNKSYVYDYIVTQDG-RPEKHIKTLWLLFPEEGQLATITAQCNEE 701
            D+PAA   +N    +A +L+  A G A  P  S A      + D T G  F+ P GW++ ET +SG RK++VY  P D + NAFV +TP+  D+TSLGSFG +D VS+ ++P       G    K+ L++A     +Y ++Y +  D  +P +H  T W + P E  L T +AQ  EE
Sbjct:   54 DLPAALEPINRRDISATILSALAIG-ASFPAISRADDTLQNYKDLTYGATFDVPSGWQKTETNLSGDRKLVVYVDPKDDNTNAFVLFTPIAADYTSLGSFGNIDYVSRIVVPPQTKGFDGSALEKTNLIEAKQAKGNYFFEYTIQPDDTQPNRHFFTYWSVVPGEC-LVTFSAQSTEE 229
[Close]
BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: A0A7R9ZSX9_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZSX9_9STRA)

HSP 1 Score: 108 bits (271), Expect = 7.750e-24
Identity = 77/217 (35.48%), Postives = 114/217 (52.53%), Query Frame = 3 
Query:  153 SASNTRCHATNSPRPTQQG-DVPAARVN---FLRTTAYVLTTAAAGLAVLPPPSNAGVFVDDTLGFQFETPEGWERGETQISGRRKIIVYTSPNDPSANAF-VAYTPVRGDFTSLGSFGTLDEVSKT-ILPGG----EGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLWLLFPEE-----GQLATITAQCNEEDYGRLGKAVDGLIASIKKK 758
            SASN    A +SP   Q G D   +++    +L +TA ++  AAA         +   + D    F  + P GW+  E +++ RRKI +Y  PN      F +A+TPVR DFTSLGSFG++D+V++T ILP G    E   ST++ A ++N +Y +DY     G+PE H +T++ L           L ++TAQC E DY       D ++ S K K
Sbjct:   24 SASN--LPAVSSPNALQSGLDDETSKITRRGWLSSTAGLVVGAAAFAPSAFAEDDLKDYKDPDCKFSIKVPAGWDFSEQELADRRKIKLYLEPNSNRKTLFFMAFTPVRDDFTSLGSFGSVDQVAQTTILPKGKIMGEENSSTMLSAESKNSAYFFDYKQKVSGQPETHFRTIFSLANGATGGAGAVLVSLTAQCPEADYDAFKPLFDSMMTSYKAK 238
[Close]
BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: A0A7S1XXW5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXW5_9STRA)

HSP 1 Score: 105 bits (261), Expect = 3.910e-23
Identity = 64/167 (38.32%), Postives = 91/167 (54.49%), Query Frame = 3 
Query:  282 AVLPPPSNAGVFVDDTLGFQFE-----TPEGWERGETQIS-GRRKIIVYTSPNDPSANAFVAYTPVRGDFTSLGSFGTLDEVSKTILPGGEGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLWLLFPEEG-----QLATITAQCNEEDYGRLGKA-VDGLIAS 746
            A+ P  + A    + T+ FQ +      P  W R E   + G+   + Y SP   S NA +AYTPVRGDFTSLGSFGT+ +V K ILP     +     A   NK+YV+DY+V   G P +H+KTL+ L P+        + ++TAQ  E D+    +A +DG++ S
Sbjct:    1 ALAPGAAPAARAAEATVLFQEKRVSVAVPGDWRRQEAPAAAGQIPAVAYLSPRGASFNAVLAYTPVRGDFTSLGSFGTIKDVEKFILPDNVNGRMISAKATRSNKAYVFDYVVEAPGAPVRHLKTLFALVPQNKATDIPSIISLTAQVLESDFNSGVEATMDGILDS 167
[Close]
BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Match: A0A0M0J7U2_9EUKA (Psbp domain-containing protein chloroplastic-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7U2_9EUKA)

HSP 1 Score: 105 bits (261), Expect = 1.180e-22
Identity = 57/178 (32.02%), Postives = 94/178 (52.81%), Query Frame = 3 
Query:  270 AAGLAVLPPPSNAGV-----FVDDTLGFQFETPEGWERGETQISGRRKIIVYTSPNDPSANAFVAYTPVRGDFTSLGSFGTLDEVSKTILP-----------GGEGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLWLLFPEEGQ---LATITAQCNEEDYGRLGKAVDGLIAS 746
            A   A+ P P+ A       + D+  G  F  PEG+     +++  R+++  T PND + N F+A+TP+R D+TSLGSFGT+D +  T+LP            G+ ++  +++  +   S+VYDY + Q G P +H+++L L    +G    L T+TAQC E  +  +      +I S
Sbjct:   37 ATAAALQPRPAAAASALPTSYKDERYGVSFLLPEGYVMKPQELADGRRLVTATDPNDDTTNVFIAFTPIRPDYTSLGSFGTIDFIGSTLLPQCGSNGACAFASGDDIEGVMLEQASVKGSFVYDYTIQQQGGPMRHLRSL-LAIKADGAASVLITLTAQCLEPKHAAVAATFKAIIES 213
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3371.9010.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSF3_ECTSI6.810e-7864.61PsbP domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835ZDA3_9STRA3.180e-4650.64PsbP domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6V1S113_HETAK2.770e-3743.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4EZ64_CHRCT1.620e-3037.20Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4JNE5_9STRA3.700e-2537.21Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
B7FU11_PHATC1.070e-2440.59Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2GEP3_9STRA3.180e-2437.64Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9ZSX9_9STRA7.750e-2435.48Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S1XXW5_9STRA3.910e-2338.32Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A0M0J7U2_9EUKA1.180e-2232.02Psbp domain-containing protein chloroplastic-like ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3371contigH-paniculata_contig3371:13754..17591 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score99.0
Seed ortholog evalue3.2e-18
Seed eggNOG ortholog35128.Thaps24309
Hectar predicted targeting categorychloroplast
EggNOG OGs2F83R@1,2T97I@2759,2XGUE@2836
Ec32 ortholog descriptionPhotosystem II PsbP, oxygen evolving complex
Ec32 orthologEc-04_000620.1
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Exons5
Model size1246
Cds size717
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930039.6024563-UTR-H-paniculata_contig3371:13753..137971622930039.6024563-UTR-H-paniculata_contig3371:13753..13797Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3371 13754..13797 +
1691481121.816974-UTR-H-paniculata_contig3371:13753..137971691481121.816974-UTR-H-paniculata_contig3371:13753..13797Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3371 13754..13797 +
1622930039.6864793-UTR-H-paniculata_contig3371:17106..175911622930039.6864793-UTR-H-paniculata_contig3371:17106..17591Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3371 17107..17591 +
1691481121.8912585-UTR-H-paniculata_contig3371:17106..175911691481121.8912585-UTR-H-paniculata_contig3371:17106..17591Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3371 17107..17591 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930039.616272-CDS-H-paniculata_contig3371:13797..138721622930039.616272-CDS-H-paniculata_contig3371:13797..13872Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3371 13798..13872 +
1691481121.83243-CDS-H-paniculata_contig3371:13797..138721691481121.83243-CDS-H-paniculata_contig3371:13797..13872Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3371 13798..13872 +
1622930039.6318033-CDS-H-paniculata_contig3371:14720..149481622930039.6318033-CDS-H-paniculata_contig3371:14720..14948Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3371 14721..14948 +
1691481121.8423219-CDS-H-paniculata_contig3371:14720..149481691481121.8423219-CDS-H-paniculata_contig3371:14720..14948Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3371 14721..14948 +
1622930039.6470597-CDS-H-paniculata_contig3371:15221..153571622930039.6470597-CDS-H-paniculata_contig3371:15221..15357Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3371 15222..15357 +
1691481121.8525736-CDS-H-paniculata_contig3371:15221..153571691481121.8525736-CDS-H-paniculata_contig3371:15221..15357Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3371 15222..15357 +
1622930039.6585684-CDS-H-paniculata_contig3371:16138..162901622930039.6585684-CDS-H-paniculata_contig3371:16138..16290Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3371 16139..16290 +
1691481121.863379-CDS-H-paniculata_contig3371:16138..162901691481121.863379-CDS-H-paniculata_contig3371:16138..16290Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3371 16139..16290 +
1622930039.6738713-CDS-H-paniculata_contig3371:16980..171061622930039.6738713-CDS-H-paniculata_contig3371:16980..17106Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3371 16981..17106 +
1691481121.878563-CDS-H-paniculata_contig3371:16980..171061691481121.878563-CDS-H-paniculata_contig3371:16980..17106Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3371 16981..17106 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3371.9010.1prot_H-paniculata_contig3371.9010.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3371 13798..17106 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3371.9010.1

>prot_H-paniculata_contig3371.9010.1 ID=prot_H-paniculata_contig3371.9010.1|Name=mRNA_H-paniculata_contig3371.9010.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=239bp
MTGVLQLMLVVGVVSCMVVLPTSVKAFIPTTGTIRSSASNTRCHATNSPR
PTQQGDVPAARVNFLRTTAYVLTTAAAGLAVLPPPSNAGVFVDDTLGFQF
ETPEGWERGETQISGRRKIIVYTSPNDPSANAFVAYTPVRGDFTSLGSFG
TLDEVSKTILPGGEGVKSTLVDAYTRNKSYVYDYIVTQDGRPEKHIKTLW
LLFPEEGQLATITAQCNEEDYGRLGKAVDGLIASIKKK*
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mRNA from alignment at H-paniculata_contig3371:13754..17591+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3371.9010.1 ID=mRNA_H-paniculata_contig3371.9010.1|Name=mRNA_H-paniculata_contig3371.9010.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3838bp|location=Sequence derived from alignment at H-paniculata_contig3371:13754..17591+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGGCCAGTCCCGCTTAGGAGTATACTTCCTGTAGTCCTGTGAGCATGACG
GGTGTCTTGCAGCTTATGCTGGTGGTGGGCGTAGTGTCATGCATGGTTGT
TCTTCCTACTTCGGTGAAGGTGATGTCGAAAAATCGGTGTTTGGTCCTAG
CGTGCAACGCGAGTGATCATGTTTCGTGCTGAACTTCAAGTCTGTTCCAG
CAAGATCTGATCTCATGCAACCCCTTTTGCCCTAACAATATTGGCTGTTG
CCGCGCACAATCGCTCCTATAGGGAGAATATTTTAGCATTGATATTTTTC
AAAGGCGGCGAAAATAGAGGCTTGTTCTCTGCATGTCTATCCTGCTTTAG
ATTGTCAACTTGCTGGCTAACTGGTTACCTCTCATGAACTGCGCCGAGGT
ATCTACTGAAGGAATACTGAGCTTGCAGGAGGACACTATACCGACACTAG
ACTATCCGTGAATCGCAGCAGTCAAGATGGATATTATCTTTTTTTGAAAC
GCGTGTCACCCGAACGACACACGACCAGCTATTTGTACGTCATTCTCACG
CCCCAAGTCTCGCCTTTACATACATATAGTTTTCATTGTATTAATTTACT
GGTATTATAGTCGCCCACAGTATATTACTGTGAAGCATTACACAGACTTA
AACAGCTGATTGGCTGCAGTTACAATTAGTCGGATCATCTGACGAGGTAA
TTGCCCAAAATGAGCCCGACTAGGGCAAACTGATCCACCTAATTCCCTAA
ATTCTCACCAACTTCGCCCTGTCTAACAAGAAAATTAGCTCGGGGCTAAC
ACAACGAATCGACTATCACGACTCTGAGTCGCAGTCATCGGTATGTGTGA
AGCATTGCAAGCAACAACCTGGGTTTTACAGCTTTAGTTGACAAGCTGCG
TAAACCCTACTGCACACTGTTATTTTCTCACCCTAGCCCCGCATGACCAT
CCCGCCGTTGATGACAGGCGTTCATACCGACAACAGGAACAATTCGCTCA
TCGGCGAGTAACACTCGTTGCCACGCCACCAACTCCCCGAGACCTACGCA
ACAGGGAGATGTCCCCGCGGCACGCGTTAATTTTCTGCGAACGACGGCGT
ACGTTCTTACGACAGCGGCTGCCGGGCTTGCCGTTCTGCCTCCACCTAGC
AACGCGGGGGTCTTCGTGGACGACACTTTGGGCTTTCAGTTCGAGGTAAA
TTGTTCCCCAATCCGTCACCGATACTAACACATGATTGTATATTTTTTTA
ATGGCTACAATGTAGTTCAGTGTACGCCTGATAGAAGGTATCGTAAATAC
ACCCTCTAAACTGTAGTTTTCTAACGTTTCTCAGGACGGTGAACTCTCGA
TGTAGTGTATAGTGGCGAGCCCCACACTAGTATCATCTTGTGACCCTAGT
CGCCCTGCTGATCATCTGGCAATATGTGTTTTTTCGCCTGGCCGCTTGTT
GTCTCTAACGGCTCGAAGACACCAGAAGGCTGGGAACGTGGAGAGACGCA
AATATCTGGGCGACGCAAGATCATAGTCTACACAAGCCCGAATGATCCCA
GCGCCAACGCTTTCGTCGCATACACGCCCGTGAGGGGCGACTTCACCTCC
CTAGGTATGTATGTGGTCGCGGAACCTCTTAGTAGGAGTGAATTGTTTTT
TTACATATCTAATTGAAAAAAATACGTAATACAAATCAGGCGCAAATAAA
AAAAGAAACGCTAGTCTGCTCATATTGGTTAGATACGCGTTTATATGTTG
ATCACGCTTTGAATATCAAAATTGGGTAATGATTTCATTGCAAGGGTAGC
CCCCCAAAGCAGCTTACACTGCTTCTGCTTTTAGGTTTCGTGACGGTACC
CGCGATACACTAGCCTGTATCTTGGCAACATGTAAAATTTTCAAAATCTT
CGGACTACCATAACGTAACAATGTTTCCTCCCCGCATGTTATAACCATTG
TCCACCGAATCTTCGCATATTTTTGTCATTTTCTTCTGAATTTGCTATTG
TTACAGTCGTTGTCCACTGAACTGCTTGCGTGATTTTGAAGAGAAACGAA
ACCATAACGCGTAGCTTCTGCCTCCGGCGAGGCCCCTACACCAAGCGTGA
GTTGTTGGGCATGAAACATTTGCAGCCCGCGCGCTCGCATCAATATTTTA
GCTTTCGGCTAGATCTTTTTTCACGACAATGTTACAATGTTAGCATATTG
GCTCCAACATCGACGAGTGTCTTGGCAATTATTTTTGGAAAACGACCAAT
ACGCAGAGAATGTGATGTGTTGTGAAAATGCCTGTACTCGACGGGTCCCG
GCCAATTGACGGACGGATGCGTTGAAAGAAAAATAAACACAACTCCCATG
TGACAATTTTCGTGCTCTCGTTGTGTGTTTCGCAGGATCTTTTGGGACTC
TGGATGAAGTGAGCAAGACGATTCTGCCTGGTGGGGAGGGGGTGAAAAGT
ACGCTGGTAGATGCCTACACCAGGAACAAATCTTACGTTTACGACTACAT
CGTCACACAGGACGGTCGCCCCGAGAAGCACATCAAGGTAGAGGGGGTGG
GAGGTGGCCGCCTGGTTGCCAGCATGTCTGACCAACCTCTACAGACACAC
TTTTTTCACGCTTTGAGTACGGGTGGATAATCAATTTCCATTTTGTAGTC
CTTATCATCAGTACCCGTATGCATATCCATGTTCGAACGGTCTCTCTAAT
TTGTGAGTTGAATTTTGTGCAGTCGATTTCTCGGGCTGTAAAAATCCAAC
ACAATCCTCGTGGGAAAGTTGAGTTCAGATTGAGTGAGATGATCGATTTC
ACTCTGAATGTTTTTTCCCCCCTCCGGGTGTGGTTTCCACAGCTTTTTTT
ATAATACCTCTAAGGTTGCATCATTGAATTCAGAAGATACCAAAGCGCTT
GTTTCGCAGACAAAATTTCAGCGGTTTACGGTTGATGCGTTCAACGTTGG
GTTTGTGGACACAGTACATAGTACCACGATCCACGTTCAGACGCGTCGAT
CACAAGGCTAGACATGTAATGCCTCAGTTCATACCCTGCTCTATCGCGTA
AGGATCGTCCGTGGACAAATCTTGACAATGGAATCAGCTTCCAAATTTGT
TGCTTGAAATTGCCATTTTTCATATTGTTATTGCACTATTGTTGATATAC
CACGTTCTCACATCTCCTTCTCTCGTGCTCTGTTGCTGTGGTTGCTACCC
TGCTGCAACGCTTTGCGTAAAAAACAGACTCTGTGGTTACTATTTCCCGA
GGAGGGGCAACTTGCTACCATCACTGCACAGTGTAACGAGGAAGACTACG
GCAGGCTGGGAAAGGCTGTGGACGGCCTAATAGCTTCGATCAAGAAAAAA
TAACTATTAATTAAGTTCCCGTGTATTCCGCTTTCCAGAGCCAGGCACAT
AACCTGTGTGCTAATCAACACGTGGCTCCCGCTGGTTTATTGTTAGTTAA
TCGCAGTTGTTCGTTGCTCGAAAATCGGTTGTAATCGTATGTTATTCCTT
GAAAATGAATTTGACTTTGTACATTATAGATTGCGTAGGTACATTATTGG
TATAGGCTAAGTACGAGGTTGCGGTAGACGGGCGGGCCGCGGAAAAAAAC
AGCGGCGTGCAAAACGTACGTGTCGTGGCAAAGCAGGCAAGAGTAATGTG
GAACCAGGGGGGGGAATGCTACGTGACTATTGTTCAGTGTGCGACAACTG
AGAAACGAGATTGTTTTCTCCCCTTTTCTCCAACACGTGAATCCTATCGT
CCGAACGCTCCGACCAGCGGTTGGTGAAGATTGAACAAAAATAACGATAC
ATGTGATAATATCAATAATAACAACAGTACCAACGCTT
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Coding sequence (CDS) from alignment at H-paniculata_contig3371:13754..17591+

>mRNA_H-paniculata_contig3371.9010.1 ID=mRNA_H-paniculata_contig3371.9010.1|Name=mRNA_H-paniculata_contig3371.9010.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1434bp|location=Sequence derived from alignment at H-paniculata_contig3371:13754..17591+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACGGGTGTCTTGCAGCTTATGCTGGTGGTGGGCGTAGTGTCATGCAT
GGTTGTTCTTCCTACTTCGGTGAAGATGACGGGTGTCTTGCAGCTTATGC
TGGTGGTGGGCGTAGTGTCATGCATGGTTGTTCTTCCTACTTCGGTGAAG
GCGTTCATACCGACAACAGGAACAATTCGCTCATCGGCGAGTAACACTCG
TTGCCACGCCACCAACTCCCCGAGACCTACGCAACAGGGAGATGTCCCCG
CGGCACGCGTTAATTTTCTGCGAACGACGGCGTACGTTCTTACGACAGCG
GCTGCCGGGCTTGCCGTTCTGCCTCCACCTAGCAACGCGGGGGTCTTCGT
GGACGACACTTTGGGCTTTCAGTTCGAGGCGTTCATACCGACAACAGGAA
CAATTCGCTCATCGGCGAGTAACACTCGTTGCCACGCCACCAACTCCCCG
AGACCTACGCAACAGGGAGATGTCCCCGCGGCACGCGTTAATTTTCTGCG
AACGACGGCGTACGTTCTTACGACAGCGGCTGCCGGGCTTGCCGTTCTGC
CTCCACCTAGCAACGCGGGGGTCTTCGTGGACGACACTTTGGGCTTTCAG
TTCGAGACACCAGAAGGCTGGGAACGTGGAGAGACGCAAATATCTGGGCG
ACGCAAGATCATAGTCTACACAAGCCCGAATGATCCCAGCGCCAACGCTT
TCGTCGCATACACGCCCGTGAGGGGCGACTTCACCTCCCTAGACACCAGA
AGGCTGGGAACGTGGAGAGACGCAAATATCTGGGCGACGCAAGATCATAG
TCTACACAAGCCCGAATGATCCCAGCGCCAACGCTTTCGTCGCATACACG
CCCGTGAGGGGCGACTTCACCTCCCTAGGATCTTTTGGGACTCTGGATGA
AGTGAGCAAGACGATTCTGCCTGGTGGGGAGGGGGTGAAAAGTACGCTGG
TAGATGCCTACACCAGGAACAAATCTTACGTTTACGACTACATCGTCACA
CAGGACGGTCGCCCCGAGAAGCACATCAAGGATCTTTTGGGACTCTGGAT
GAAGTGAGCAAGACGATTCTGCCTGGTGGGGAGGGGGTGAAAAGTACGCT
GGTAGATGCCTACACCAGGAACAAATCTTACGTTTACGACTACATCGTCA
CACAGGACGGTCGCCCCGAGAAGCACATCAAGACTCTGTGGTTACTATTT
CCCGAGGAGGGGCAACTTGCTACCATCACTGCACAGTGTAACGAGGAAGA
CTACGGCAGGCTGGGAAAGGCTGTGGACGGCCTAATAGCTTCGATCAAGA
AAAAATAAACTCTGTGGTTACTATTTCCCGAGGAGGGGCAACTTGCTACC
ATCACTGCACAGTGTAACGAGGAAGACTACGGCAGGCTGGGAAAGGCTGT
GGACGGCCTAATAGCTTCGATCAAGAAAAAATAA
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