prot_H-paniculata_contig33537.8980.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig33537.8980.1
Unique Nameprot_H-paniculata_contig33537.8980.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length73
Homology
BLAST of mRNA_H-paniculata_contig33537.8980.1 vs. uniprot
Match: A0A6H5K868_9PHAE (Coatomer_WDAD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K868_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.130e-31
Identity = 60/70 (85.71%), Postives = 65/70 (92.86%), Query Frame = 0
Query:    4 QVEDCLDLLVSSGRVPEACFMARTYLPSAMGRLVALWKKDLAKVSTKAAQALADPVEYPNMFDDLPWALK 73
            QVE+CL+LLVS+GRVPEA FMARTYLPSAMGRLV LWKKDLA VS KA+QALA+PVEYPNMFDDL WALK
Sbjct:  201 QVEECLELLVSAGRVPEAAFMARTYLPSAMGRLVELWKKDLATVSAKASQALANPVEYPNMFDDLDWALK 270          
BLAST of mRNA_H-paniculata_contig33537.8980.1 vs. uniprot
Match: A0A7S2SR98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR98_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.570e-24
Identity = 47/71 (66.20%), Postives = 60/71 (84.51%), Query Frame = 0
Query:    3 NQVEDCLDLLVSSGRVPEACFMARTYLPSAMGRLVALWKKDLAKVSTKAAQALADPVEYPNMFDDLPWALK 73
            N+VE+C++LLV + RVPEA FMARTY+PS M ++V  W++DLAKVS +AA+ALADP EYPN+F DL WALK
Sbjct:  770 NEVEECINLLVETDRVPEAAFMARTYMPSMMSKIVVQWREDLAKVSERAAKALADPGEYPNLFPDLDWALK 840          
BLAST of mRNA_H-paniculata_contig33537.8980.1 vs. uniprot
Match: A0A835YRX4_9STRA (Coatomer WD associated region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRX4_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.390e-23
Identity = 48/70 (68.57%), Postives = 59/70 (84.29%), Query Frame = 0
Query:    4 QVEDCLDLLVSSGRVPEACFMARTYLPSAMGRLVALWKKDLAKVSTKAAQALADPVEYPNMFDDLPWALK 73
            ++E+CL+LLV +GR+PEA FMARTYLPS M RLV LWKKDL  VS KAA+ALADP +YPN+F+DL  AL+
Sbjct:  749 RLEECLELLVKAGRLPEAAFMARTYLPSEMPRLVELWKKDLQSVSVKAAEALADPSQYPNLFEDLDVALR 818          
BLAST of mRNA_H-paniculata_contig33537.8980.1 vs. uniprot
Match: A0A7S2G0J9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G0J9_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 4.230e-23
Identity = 42/69 (60.87%), Postives = 57/69 (82.61%), Query Frame = 0
Query:    4 QVEDCLDLLVSSGRVPEACFMARTYLPSAMGRLVALWKKDLAKVSTKAAQALADPVEYPNMFDDLPWAL 72
            ++E+C++LL+ +GR+PEA F+ARTY+PS M ++V  WK DL KVS +AAQALADP EYPN+F DL WA+
Sbjct:  224 RIEECIELLMQTGRIPEAAFLARTYMPSEMPQIVIKWKADLTKVSERAAQALADPAEYPNLFPDLDWAV 292          
BLAST of mRNA_H-paniculata_contig33537.8980.1 vs. uniprot
Match: UPI000C1CDDFA (coatomer subunit beta'-2-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CDDFA)

HSP 1 Score: 94.0 bits (232), Expect = 4.650e-23
Identity = 41/67 (61.19%), Postives = 54/67 (80.60%), Query Frame = 0
Query:    1 MGNQVEDCLDLLVSSGRVPEACFMARTYLPSAMGRLVALWKKDLAKVSTKAAQALADPVEYPNMFDD 67
            M  ++EDCL LLV S R+PEA  MAR+YLPS +  +VALW+KDL K++ KAA++LADP EYPN+F+D
Sbjct:    1 MSGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLNKINPKAAESLADPEEYPNLFED 67          
BLAST of mRNA_H-paniculata_contig33537.8980.1 vs. uniprot
Match: A0A6J0JHN3_RAPSA (coatomer subunit beta'-2-like n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0JHN3_RAPSA)

HSP 1 Score: 95.1 bits (235), Expect = 6.340e-23
Identity = 44/72 (61.11%), Postives = 58/72 (80.56%), Query Frame = 0
Query:    1 MGNQVEDCLDLLVSSGRVPEACFMARTYLPSAMGRLVALWKKDLAKVSTKAAQALADPVEYPNMFDDLPWAL 72
            M  ++EDCL LLV S R+PEA  MAR+YLPS +  +VALW+KDL+KV++KAA++LADP EYPN+F+D   AL
Sbjct:    1 MLGRLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSKVNSKAAESLADPEEYPNLFEDWQVAL 72          
BLAST of mRNA_H-paniculata_contig33537.8980.1 vs. uniprot
Match: A0A392NQL5_9FABA (Coatomer subunit beta'-2-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392NQL5_9FABA)

HSP 1 Score: 93.6 bits (231), Expect = 1.940e-22
Identity = 43/72 (59.72%), Postives = 57/72 (79.17%), Query Frame = 0
Query:    1 MGNQVEDCLDLLVSSGRVPEACFMARTYLPSAMGRLVALWKKDLAKVSTKAAQALADPVEYPNMFDDLPWAL 72
            M  ++EDCL LLV S R+PEA  MAR+YLPS +  +VA+W+KDL+KV+ KAA++LADP EYPN+F+D   AL
Sbjct:   50 MLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLSKVNPKAAESLADPEEYPNLFEDWQVAL 121          
BLAST of mRNA_H-paniculata_contig33537.8980.1 vs. uniprot
Match: UPI00053BB939 (coatomer subunit beta'-2-like isoform X1 n=2 Tax=Camelina sativa TaxID=90675 RepID=UPI00053BB939)

HSP 1 Score: 95.1 bits (235), Expect = 1.960e-22
Identity = 44/72 (61.11%), Postives = 58/72 (80.56%), Query Frame = 0
Query:    1 MGNQVEDCLDLLVSSGRVPEACFMARTYLPSAMGRLVALWKKDLAKVSTKAAQALADPVEYPNMFDDLPWAL 72
            M  ++EDCL LLV S R+PEA  MAR+YLPS +  +VALW+KDL+KV++KAA++LADP EYPN+F+D   AL
Sbjct:   50 MLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSKVNSKAAESLADPEEYPNLFEDWQVAL 121          
BLAST of mRNA_H-paniculata_contig33537.8980.1 vs. uniprot
Match: A0A7S3HIJ6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIJ6_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.420e-22
Identity = 41/70 (58.57%), Postives = 57/70 (81.43%), Query Frame = 0
Query:    4 QVEDCLDLLVSSGRVPEACFMARTYLPSAMGRLVALWKKDLAKVSTKAAQALADPVEYPNMFDDLPWALK 73
            QVE+ + LL+ + R+PEA FMARTY+PS + R++ +WK+DL  ++ KAA+ALADPV+YPN+F DL WALK
Sbjct:  114 QVEEAIQLLIDANRIPEAAFMARTYMPSQISRVLEIWKRDLKTINEKAAEALADPVKYPNLFPDLSWALK 183          
BLAST of mRNA_H-paniculata_contig33537.8980.1 vs. uniprot
Match: A0A250X594_9CHLO (Coatomer subunit beta' n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X594_9CHLO)

HSP 1 Score: 97.8 bits (242), Expect = 4.250e-22
Identity = 44/70 (62.86%), Postives = 54/70 (77.14%), Query Frame = 0
Query:    4 QVEDCLDLLVSSGRVPEACFMARTYLPSAMGRLVALWKKDLAKVSTKAAQALADPVEYPNMFDDLPWALK 73
            Q+E C++LLVS+ R+PEA F  RTYLPS M  +  +WKKDL K + KAA+ALADP EYPN+F DL WALK
Sbjct:  757 QLESCMELLVSAKRLPEAAFFCRTYLPSKMSEVTKIWKKDLEKQNPKAAEALADPAEYPNLFPDLEWALK 826          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33537.8980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K868_9PHAE1.130e-3185.71Coatomer_WDAD domain-containing protein n=1 Tax=Ec... [more]
A0A7S2SR98_9STRA1.570e-2466.20Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A835YRX4_9STRA1.390e-2368.57Coatomer WD associated region-domain-containing pr... [more]
A0A7S2G0J9_9STRA4.230e-2360.87Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
UPI000C1CDDFA4.650e-2361.19coatomer subunit beta'-2-like n=1 Tax=Olea europae... [more]
A0A6J0JHN3_RAPSA6.340e-2361.11coatomer subunit beta'-2-like n=1 Tax=Raphanus sat... [more]
A0A392NQL5_9FABA1.940e-2259.72Coatomer subunit beta'-2-like (Fragment) n=1 Tax=T... [more]
UPI00053BB9391.960e-2261.11coatomer subunit beta'-2-like isoform X1 n=2 Tax=C... [more]
A0A7S3HIJ6_9STRA3.420e-2258.57Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A250X594_9CHLO4.250e-2262.86Coatomer subunit beta' n=1 Tax=Chlamydomonas eusti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.470coord: 1..64
e-value: 1.4E-15
score: 59.4
NoneNo IPR availablePANTHERPTHR19876:SF31COATOMER SUBUNIT BETA'-3coord: 4..69
NoneNo IPR availablePANTHERPTHR19876COATOMERcoord: 4..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig33537contigH-paniculata_contig33537:805..1618 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig33537.8980.1mRNA_H-paniculata_contig33537.8980.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig33537 805..1618 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig33537.8980.1 ID=prot_H-paniculata_contig33537.8980.1|Name=mRNA_H-paniculata_contig33537.8980.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp
MGNQVEDCLDLLVSSGRVPEACFMARTYLPSAMGRLVALWKKDLAKVSTK
AAQALADPVEYPNMFDDLPWALK
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