prot_H-paniculata_contig33470.8965.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig33470.8965.1
Unique Nameprot_H-paniculata_contig33470.8965.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length134
Homology
BLAST of mRNA_H-paniculata_contig33470.8965.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.180e-20
Identity = 52/125 (41.60%), Postives = 72/125 (57.60%), Query Frame = 0
Query:    1 RTSSESHVILECHNEDACIGGTNTENYCRTGYRGPYCAVCAEDYAPGVLYSCRKCSAASFRWAVGLTVVIVLVVILGVTTFVLDLVRVEHGSTEEQVRARGFLERKWYYFCA-LLVKAFPLTTTR 124
            RTS+ES  +L+C+ E+ACIGGT+   YC+ GYRG YCAVC E YA G  +SC  C   + R A+G +V +  V ++G+   + DLVRV      +     G    K    C   +VKA PLT+ +
Sbjct:  621 RTSAESQNVLKCYQEEACIGGTDVSQYCQEGYRGAYCAVCDEGYASGYQFSCSICDGENLRSAIGTSVALFFVALVGIALVIADLVRVVDEVEPDTASTWG----KRLTSCRDRIVKAVPLTSIK 741          
BLAST of mRNA_H-paniculata_contig33470.8965.1 vs. uniprot
Match: D7FUB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB6_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 5.710e-17
Identity = 35/65 (53.85%), Postives = 45/65 (69.23%), Query Frame = 0
Query:    1 RTSSESHVILECHNEDACIGGTNTENYCRTGYRGPYCAVCAEDYAPGVLYSCRKCSAASFRWAVG 65
            RTS+ES +ILECH E+AC+GG+    YC TGY+G YCA C E YA G+ YSC+ C   +   A+G
Sbjct:  398 RTSAESDIILECHREEACVGGSTAGEYCATGYQGAYCAACEEGYASGLQYSCKSCGGDNATSAIG 462          
BLAST of mRNA_H-paniculata_contig33470.8965.1 vs. uniprot
Match: D8LRF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF7_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.030e-10
Identity = 40/95 (42.11%), Postives = 56/95 (58.95%), Query Frame = 0
Query:    1 RTSSESHVILECHNEDACIGG------TNTENYCRTGYRGPYCAVCAEDYAPGVLYSCRKCSAASFRWAVGLTVVIVL---VVILGVTTFVLDLV 86
            R++  S  I EC N+DACIG       ++  +YC TGY GPYCAVC + Y  GV ++C  C  +   WA G+ VV+ L   V+++GV   + DLV
Sbjct:  468 RSTETSTNIRECFNDDACIGSEVSQRISSPNDYCDTGYMGPYCAVCMDGYTTGVSHTCHSCDGS--YWA-GMVVVMALTGVVLVVGVVIVLNDLV 559          
BLAST of mRNA_H-paniculata_contig33470.8965.1 vs. uniprot
Match: A0A6H5JCK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK8_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 4.470e-9
Identity = 25/67 (37.31%), Postives = 38/67 (56.72%), Query Frame = 0
Query:    1 RTSSESHVILECHNEDACIGGTN---TENYCRTGYRGPYCAVCAEDYAPGVLYSCRKCSAASFRWAV 64
            R+  ES  +L C + ++C G T+   +++YC +GY GPYCA C   Y  G+  +C  C    FRW +
Sbjct:  415 RSGKESATVLACIHAESCAGATHVSTSDDYCSSGYEGPYCASCQAGYGTGIGNTCHSCDGTRFRWLI 481          
BLAST of mRNA_H-paniculata_contig33470.8965.1 vs. uniprot
Match: D7G1E0_ECTSI (EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E0_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 1.140e-8
Identity = 37/95 (38.95%), Postives = 53/95 (55.79%), Query Frame = 0
Query:   12 CHNEDACIGG-TNTENYCRTGYRGPYCAVCAEDYAPGVLYSCRKCSAASFRWAVGLTVVIVLVVILGVTTFVLDLVRVEHGSTEEQVRARGFLER 105
            CH +    GG T  +N+C +GY+GPYCAVC  DY+P + ++C  CS++  R   GLTV+  + VI  VT F +  +     STE +    G   R
Sbjct:  876 CHFKGNSAGGKTGADNFCASGYQGPYCAVCKTDYSPSLAHTCTHCSSSRRR---GLTVIAAIAVI--VTVFAIVAIFQYMLSTEHEDGILGCFRR 965          
BLAST of mRNA_H-paniculata_contig33470.8965.1 vs. uniprot
Match: A0A836CD27_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD27_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.100e-8
Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 0
Query:    8 VILECHNEDACIGG---------TNTENYCRTGYRGPYCAVCAEDYAPGVLYSCRKCSAASFRWAVGLTVV 69
            ++ +C N+ AC G          T+T+ YC  GYRGPYCAVCA+ Y     Y+C++CS+ +   A+ LTV+
Sbjct:  574 IVRKCWNKGACAGAPSAAAAVDVTSTDAYCAPGYRGPYCAVCADGYTNFFRYTCKECSSGA---AIALTVI 641          
BLAST of mRNA_H-paniculata_contig33470.8965.1 vs. uniprot
Match: A0A835ZLE8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE8_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 3.880e-8
Identity = 34/97 (35.05%), Postives = 52/97 (53.61%), Query Frame = 0
Query:    1 RTSSESHVILECHNEDACIGGT---NTENYCRTGYRGPYCAVCAEDYAPGVLYSCRKCSAASFRWAVGLTVVIVLVVILGVTTFVLDLVRVEHGSTE 94
            R +    V+ +C N  AC GG    + + YC  GY+GPYCAVC+++Y   V Y C +C+      AV +  V++ VV +     +  LVR   G++E
Sbjct:  569 RETLTQEVVRQCWNSAACSGGAAAASVDEYCAAGYKGPYCAVCSDNYGALVGYRCVECT----NTAVAIAFVVMAVVAVTAVFLLWVLVRAVGGASE 661          
BLAST of mRNA_H-paniculata_contig33470.8965.1 vs. uniprot
Match: D7FRG6_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG6_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 7.360e-8
Identity = 25/67 (37.31%), Postives = 35/67 (52.24%), Query Frame = 0
Query:    1 RTSSESHVILECHNEDACIGGTNT---ENYCRTGYRGPYCAVCAEDYAPGVLYSCRKCSAASFRWAV 64
            R+  ES  +L C + ++C G T     E+YC +GY GPYCA C   Y  G+  +C  C     RW +
Sbjct:  864 RSGKESSTVLACIHAESCAGATQVSTAEDYCSSGYEGPYCASCQAGYGTGIGNTCHPCDDTRSRWLI 930          
BLAST of mRNA_H-paniculata_contig33470.8965.1 vs. uniprot
Match: A0A835YZD4_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZD4_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.340e-7
Identity = 31/70 (44.29%), Postives = 39/70 (55.71%), Query Frame = 0
Query:    1 RTSSESHVILECHNEDACIGG----------TNTEN-YCRTGYRGPYCAVCAEDYAPGVLYSCRKCSAAS 59
            R S E  V+ +C  E AC GG           N  N YC+ GY GPYCAVCA+ +    LY C++CSA+S
Sbjct:  653 RGSEEYVVVHKCLRESACEGGRVYVAAGADSANAANGYCKDGYSGPYCAVCADGFVSTGLYECQQCSASS 722          
BLAST of mRNA_H-paniculata_contig33470.8965.1 vs. uniprot
Match: A0A835Z2L6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2L6_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.810e-7
Identity = 35/94 (37.23%), Postives = 45/94 (47.87%), Query Frame = 0
Query:    8 VILECHNEDACIGGT-------------------NTENYCRTGYRGPYCAVCAEDYAPGVLYSCRKCSAASFRWAVGLTVVIVLVVILGVTTFV 82
            +I  C N  AC+GGT                   +++ YC  GYRGPYCAVCA+ YA    Y C +C+A      V   VV+  VV LG+   V
Sbjct:  514 IIRACPNRQACVGGTGATSIGVWTQEAGVWSLGWSSDAYCAAGYRGPYCAVCADGYAAVTGYKCVECTAGIVGAVVVGMVVLFAVVALGLWVLV 607          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33470.8965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5JWI3_9PHAE1.180e-2041.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUB6_ECTSI5.710e-1753.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRF7_ECTSI1.030e-1042.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCK8_9PHAE4.470e-937.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1E0_ECTSI1.140e-838.95EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A836CD27_9STRA2.100e-840.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZLE8_9STRA3.880e-835.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FRG6_ECTSI7.360e-837.31Polymorphic membrane protein n=1 Tax=Ectocarpus si... [more]
A0A835YZD4_9STRA1.340e-744.29Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835Z2L6_9STRA1.810e-737.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 87..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 128..134
NoneNo IPR availableTMHMMTMhelixcoord: 60..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig33470contigH-paniculata_contig33470:1283..1990 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig33470.8965.1mRNA_H-paniculata_contig33470.8965.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig33470 1283..1992 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig33470.8965.1 ID=prot_H-paniculata_contig33470.8965.1|Name=mRNA_H-paniculata_contig33470.8965.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp
RTSSESHVILECHNEDACIGGTNTENYCRTGYRGPYCAVCAEDYAPGVLY
SCRKCSAASFRWAVGLTVVIVLVVILGVTTFVLDLVRVEHGSTEEQVRAR
GFLERKWYYFCALLVKAFPLTTTRSSWSFGRSSP
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