prot_H-paniculata_contig3338.8945.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3338.8945.1
Unique Nameprot_H-paniculata_contig3338.8945.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length486
Homology
BLAST of mRNA_H-paniculata_contig3338.8945.1 vs. uniprot
Match: D7FTC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC7_ECTSI)

HSP 1 Score: 415 bits (1067), Expect = 1.010e-127
Identity = 256/499 (51.30%), Postives = 317/499 (63.53%), Query Frame = 0
Query:    2 LAKERQLMDV----IGAAGSRVGPHHTLGGG----GGAPGVYSVLQAAMGSRPGVGGIVQRPYSQDTGFCVFWDYVLGLPKRNGSRVIGKVRLAFGLYVGSRLQGKMMSTKWASPSASTVMQEDTRNHETCCLLETRNIFAGIPVNVQTRLVVELQFKDEGGNYIKA-KDTLGWGSMHVFKPEKGNAQRLTVRAGLTKLNLFRGRVDLRVANINDAMSALSRSTPTAAFLRLVHSEDINGAAAFVVNPETHNLYVGYGRGHLPQSERRKFMTGTFVRSIVFIAKLKLAVSASKLDKAHLKNAVEGIAPLIHIDAAKENPKLRR-ASSRYDRGTGNHTHFTASLPSSPEVMSETNAE--RGSNIDSQSKAENDIGVSAPADSTRRSNAGSSCTPQEAAAGAGTSEELHMTSSSGGDPSQKASVSGVR--RERRSSSVTSLQTHLAAQKTMAREASLGKRRRSMLSRQPFLKGDGFDLYVDAGVGMPYCCTVVKVVVRRVG 486
            LAKERQL++V      A G  VG +  LGGG    GG   V + L AA G RPGVGGIVQRPY++D GFCVFWDY+ GLPKR+GS+VIGKVRLAFGLY+G RL GKM+ST W   +   V   +T   ET   LETR+ F GIPV++QT+LVVELQFKDE G   K  K  LGWG ++VFKPEKG+  RLT+RAGLT+L LF G VDLR+AN+ND  SA+SRSTPTAAF+RLVH  D+N AAAFVV+P+T +LY  YGRG++PQ ER+K M GTF+R+I+ + K K A+   K  +A               DAAK++P LRR +SS   RG+   T F   LP +    SET +E       D              AD  + S       P E  + +  SEE              ++  G R  +ERR SS++S+ + LA QKTMAR ASL KRR+S +SRQPFLKGDGFD+Y+D   GMPY CT+ KVVVR +G
Sbjct:  804 LAKERQLIEVQQTLTDARGGGVG-NGALGGGRLAGGGFGEVAAALHAAGGWRPGVGGIVQRPYNKDQGFCVFWDYLTGLPKRSGSKVIGKVRLAFGLYIGKRLHGKMLSTPWTDIAPRAVKNGNTGKAETFSKLETRSTFPGIPVHLQTKLVVELQFKDEAGVQRKGGKGNLGWGCIYVFKPEKGSPHRLTLRAGLTRLTLFPGSVDLRIANVNDDKSAVSRSTPTAAFIRLVHGMDMNPAAAFVVDPDTQHLYAAYGRGNIPQMERQKLMAGTFLRAILALGKFKRALVTHKRTRAS------------GGDAAKDHPPLRRRSSSPLRRGSTRRTSFK--LPRTGTFSSETRSEPQAADGTDGXXXXXXXXAKQPKADKQQASK------PDEKRSESPKSEERDSVEXXXXXXXXGSAKGGGRETKERRRSSLSSIHSQLAGQKTMARRASLSKRRQSTVSRQPFLKGDGFDIYIDRACGMPYSCTITKVVVRVIG 1281          
BLAST of mRNA_H-paniculata_contig3338.8945.1 vs. uniprot
Match: A0A6H5K786_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K786_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 2.850e-98
Identity = 221/502 (44.02%), Postives = 276/502 (54.98%), Query Frame = 0
Query:    2 LAKERQLMDVIG----AAGSRVGPHHTLGG---GGGAPGVYSVLQAAMGSRPGVGGIVQRPYSQDTGFCVFWDYVLGLPKRNGSRVIGKVRLAFGLYVGSRLQGKMMSTKWASPSASTVMQEDTRNHETCCLLETRNIFAGIPVNVQTRLVVELQFKDEGGNYIKA-KDTLGWGSMHVFKPEKGNAQRLTVRAGLTKLNLFRGRVDLRVANINDAMSALSRSTPTAAFLRLVHSEDINGAAAFVVNPETHNLYVGYGRGHLPQSERRKFMTGTFVRSIVFIAKLKLAVSASKLDKAHLKNAVEGIAPLIHIDAAKENPK----LRRASSRYDRGTGNHTHFTASLPSSPEVMSETNAERGSNIDSQSKAENDIGVSAPADSTRRSNAGSSCTPQEAAAGAGTSEELHMTSSSGGDPSQKASVSGVRRERRSSSVTSLQTHL-----AAQKTMAREASLGKRRRSMLSRQPFLKGDGFDLYVDAGVGMPYCCTVVKVVVRRVG 486
            LAKERQL++V      A G   G     GG   GGG   V + L AA G RPGVGGIV+RPY++D GFCVFWDY+ GLPKR+GS+VIGKVRLAFGLY+G RL GKM ST W      TV   +T   ET   LETR+ F GIPV++QT+LVVELQFKDE G   K  K  LGWG ++VFKPEKG+  RLT+RAGLT+L LF G VDLR+AN+ND  SA+SRSTPTAAF+RLVH  D+N AAAFVV+P+T +LY  YGRG++ Q ER+KFM G                                        A ++ P     L+R S +  R  G  +  T S P +     +    +    D Q          AP  + +RS +                                       +ERR SS+++LQ  L          +AR+ +L  R  + +SRQPFLKGDGFD+Y+D   GMPY CT+ KVVVR +G
Sbjct:  539 LAKERQLIEVXXTLTDARGGGAGNSVLCGGRLAGGGFSEVAAALHAAGGWRPGVGGIVERPYNKDQGFCVFWDYLTGLPKRSGSKVIGKVRLAFGLYIGKRLHGKMHSTPWTDIEPRTVKNGNTGKAETFSKLETRSTFPGIPVHLQTKLVVELQFKDEAGVQRKGGKGNLGWGCVYVFKPEKGSPHRLTLRAGLTRLTLFPGSVDLRIANVNDDKSAVSRSTPTAAFVRLVHGMDMNPAAAFVVDPDTQHLYAAYGRGNISQMERQKFMAGAC--------------------------------------AGQQGPPRGSCLKRTSFKPPRA-GKFSSETTSEPQAAGGAGDGEVAKQPKTDKQQ---------APEPNEKRSESXXXXXXX-----------XXXXXXXXXXXXXXXXXXSETKERRRSSLSALQDSLWPFCATRSAGVARKHTL-PRVCNQVSRQPFLKGDGFDIYIDRACGMPYSCTISKVVVRVIG 980          
BLAST of mRNA_H-paniculata_contig3338.8945.1 vs. uniprot
Match: A0A7S2RR12_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RR12_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.630e-9
Identity = 63/202 (31.19%), Postives = 93/202 (46.04%), Query Frame = 0
Query:   47 GVGGIVQRPYSQDTGFCVFWDYVLGLPKRNGSRVIGKVRLAFGLYVGSRLQGKMMSTKWASPSASTVMQEDTRNHETCCLLETRNIFAGIPVNVQTRLVVELQFKDEGGNYIKAKDTLGWGSMHVFKPEKGNAQRLTVRAGLTKLNLFRGRVDLR-VANINDAMSALSRSTPTAAFLRLVHSEDINGAAAFVVNPE-THNLY 246
            G  G  QRPY   +GF V++DY+LG+PKR        VR+ F +Y G     K  +     P   T  +ED+   ++  L+  R  F  +P     R+V+ELQ   E     K   ++GW  +++F    G+   LT   G  KL   +    L  + N N         T    F+R++H ED   A+ FVV+P  T +LY
Sbjct:  577 GKAGAGQRPYDPQSGFVVYFDYILGIPKR-----FPVVRMVFCIYDGQ----KCKTPAKGLPQCET--EEDSPTKQSAMLV-ARKKFQKVPALTSLRMVMELQCVVENPYGGKNYQSIGWTVLNLFS---GDPTNLT--DGPLKLAFRKPPFKLHELENFNSISPDEGHMT---GFIRVIHGEDTEAASDFVVDPHVTQHLY 758          
BLAST of mRNA_H-paniculata_contig3338.8945.1 vs. uniprot
Match: A0A7S3RYL9_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RYL9_EMIHU)

HSP 1 Score: 66.6 bits (161), Expect = 7.800e-8
Identity = 57/204 (27.94%), Postives = 91/204 (44.61%), Query Frame = 0
Query:   43 GSRPGVGGIVQRPYSQDTGFCVFWDYVLGLPKRNGSRVIGKVRLAFGLYVGSRLQGKMMSTKWAS--PSASTVMQEDTRNHETCCLLETRNIFAGIPVNVQTRLVVELQ--FKDEGGNYIKAKD-TLGWGSMHVFKPEKGNAQRLTVRAGLTKLNLFRGRVDLRVANINDAMSALSRSTPTAAFLRLVHSEDINGAAAFVVNPE 241
            G+ PGV      PYS D+GF VFWD+V  LP+      + +  L + LY G +++G + S       P    + +          L   R  F   P +   +LVVE+Q      GG     K  ++GW S+ +F+P       L +RAG  +  L+R  +     N +  +   +   P + F R+V + D+    AF V+P+
Sbjct:  545 GTLPGV------PYSADSGFVVFWDFVSALPRH-----VAQCNLVYALYDGPKMRGAVKSLPVCDCEPEPGGLAR---------ALFAIRRQFMHTPAHQDLQLVVEVQHVIAPAGGPGAPPKTASVGWTSVPLFEPS------LALRAGFWRAPLYRPPI-----NASTPVPERTPLDPMSLFFRVVLTADMERLRAFAVDPD 717          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3338.8945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FTC7_ECTSI1.010e-12751.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K786_9PHAE2.850e-9844.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2RR12_9STRA1.630e-931.19Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S3RYL9_EMIHU7.800e-827.94Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038800Coiled-coil domain-containing protein 17PANTHERPTHR33820FAMILY NOT NAMEDcoord: 52..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3338contigH-paniculata_contig3338:1643..14859 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3338.8945.1mRNA_H-paniculata_contig3338.8945.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3338 1637..14859 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3338.8945.1 ID=prot_H-paniculata_contig3338.8945.1|Name=mRNA_H-paniculata_contig3338.8945.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=486bp
MLAKERQLMDVIGAAGSRVGPHHTLGGGGGAPGVYSVLQAAMGSRPGVGG
IVQRPYSQDTGFCVFWDYVLGLPKRNGSRVIGKVRLAFGLYVGSRLQGKM
MSTKWASPSASTVMQEDTRNHETCCLLETRNIFAGIPVNVQTRLVVELQF
KDEGGNYIKAKDTLGWGSMHVFKPEKGNAQRLTVRAGLTKLNLFRGRVDL
RVANINDAMSALSRSTPTAAFLRLVHSEDINGAAAFVVNPETHNLYVGYG
RGHLPQSERRKFMTGTFVRSIVFIAKLKLAVSASKLDKAHLKNAVEGIAP
LIHIDAAKENPKLRRASSRYDRGTGNHTHFTASLPSSPEVMSETNAERGS
NIDSQSKAENDIGVSAPADSTRRSNAGSSCTPQEAAAGAGTSEELHMTSS
SGGDPSQKASVSGVRRERRSSSVTSLQTHLAAQKTMAREASLGKRRRSML
SRQPFLKGDGFDLYVDAGVGMPYCCTVVKVVVRRVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038800CCDC17