prot_H-paniculata_contig33317.8934.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig33317.8934.1
Unique Nameprot_H-paniculata_contig33317.8934.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length102
Homology
BLAST of mRNA_H-paniculata_contig33317.8934.1 vs. uniprot
Match: D7G354_ECTSI (COP9 signalosome complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G354_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 6.210e-47
Identity = 83/102 (81.37%), Postives = 93/102 (91.18%), Query Frame = 0
Query:    1 KAKGFEIADGDLLELLGKAITCAVLGKAGPQRSRQMGVLLKDERVESLSRVPGLSTHAQVLTKMYTEQILRKHEMEAFEESLMPHQKAITAEGLPIPVSAMV 102
            ++KG E+   DLL+LLGKAITCAVLGKAGPQRSRQMGVLL+DERV SL+RVPG STH+QVLTKMYTEQILRKH+MEAFEESLM HQKAITAEGLPIP  A++
Sbjct:  215 QSKGLEVDPDDLLQLLGKAITCAVLGKAGPQRSRQMGVLLRDERVGSLARVPGFSTHSQVLTKMYTEQILRKHDMEAFEESLMDHQKAITAEGLPIPERAVM 316          
BLAST of mRNA_H-paniculata_contig33317.8934.1 vs. uniprot
Match: A0A7S2FBM7_9STRA (COP9 signalosome complex subunit 4 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FBM7_9STRA)

HSP 1 Score: 116 bits (291), Expect = 3.930e-29
Identity = 57/92 (61.96%), Postives = 74/92 (80.43%), Query Frame = 0
Query:   11 DLLELLGKAITCAVLGKAGPQRSRQMGVLLKDERVESLSRVPGLSTHAQVLTKMYTEQILRKHEMEAFEESLMPHQKAITAEGLPIPVSAMV 102
            +LLEL GKA TCA+LGKAGPQR R +G L KDER+ +L ++ G STHAQVLTKMY +QILR+ E+ AFE+SL PHQKA+T++ + IP  A++
Sbjct:  188 ELLELFGKATTCAILGKAGPQRDRILGSLYKDERLGTLEQLEGYSTHAQVLTKMYMQQILRRTELRAFEDSLSPHQKAMTSDKMTIPQRAVI 279          
BLAST of mRNA_H-paniculata_contig33317.8934.1 vs. uniprot
Match: A0A835ZDX9_9STRA (COP9 signalosome complex subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDX9_9STRA)

HSP 1 Score: 110 bits (276), Expect = 7.930e-27
Identity = 58/97 (59.79%), Postives = 70/97 (72.16%), Query Frame = 0
Query:    6 EIADGDLLELLGKAITCAVLGKAGPQRSRQMGVLLKDERVESLSRVPGLSTHAQVLTKMYTEQILRKHEMEAFEESLMPHQKAITAEGLPIPVSAMV 102
            +IA  DLLELLG+ ITCAVLGKAGPQR+R +    KD R+ SL  VP    H+QVLTKMY  Q+LRK+EM+AFEE L  HQKA   +GL IP  A++
Sbjct:  207 QIAAEDLLELLGRGITCAVLGKAGPQRTRILANFYKDPRLASLENVPPFQAHSQVLTKMYKCQVLRKNEMKAFEEGLAEHQKAKMGDGLTIPERAVI 303          
BLAST of mRNA_H-paniculata_contig33317.8934.1 vs. uniprot
Match: A0A7S3H9J9_9STRA (COP9 signalosome complex subunit 4 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9J9_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.770e-26
Identity = 51/93 (54.84%), Postives = 70/93 (75.27%), Query Frame = 0
Query:    4 GFEIADGDLLELLGKAITCAVLGKAGPQRSRQMGVLLKDERVESLSRVPGLSTHAQVLTKMYTEQILRKHEMEAFEESLMPHQKAITAEGLPI 96
            G+ +   DLLELLGKA+TCA+LGKAG QRSR +G+L+KDER+  L      ++H  VLTKM+ EQIL++HE++ F ++LMPHQKA+  +G  I
Sbjct:  221 GYNVLQEDLLELLGKAVTCAILGKAGQQRSRVLGLLIKDERLADLDNTAKYTSHRVVLTKMHLEQILKRHELDLFVQALMPHQKAVAGDGYSI 313          
BLAST of mRNA_H-paniculata_contig33317.8934.1 vs. uniprot
Match: A0A7S0SZ10_9STRA (COP9 signalosome complex subunit 4 (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZ10_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.110e-26
Identity = 54/97 (55.67%), Postives = 69/97 (71.13%), Query Frame = 0
Query:    6 EIADGDLLELLGKAITCAVLGKAGPQRSRQMGVLLKDERVESLSRVPGLSTHAQVLTKMYTEQILRKHEMEAFEESLMPHQKAITAEGLPIPVSAMV 102
            EI   DLLELLGKAITC +L KAGPQR+R +  + KD+R+  L ++P  S H+ VL KM  EQ+LRK E+  F ESL PHQKA+T+EG  IP  A++
Sbjct:  108 EIVQDDLLELLGKAITCVILAKAGPQRTRILAQINKDDRLGQLEQLPKYSIHSNVLNKMSNEQLLRKDELNQFIESLAPHQKAMTSEGFTIPEKAVI 204          
BLAST of mRNA_H-paniculata_contig33317.8934.1 vs. uniprot
Match: A0A6V1T605_HETAK (COP9 signalosome complex subunit 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T605_HETAK)

HSP 1 Score: 107 bits (268), Expect = 1.160e-25
Identity = 54/95 (56.84%), Postives = 69/95 (72.63%), Query Frame = 0
Query:    6 EIADGDLLELLGKAITCAVLGKAGPQRSRQMGVLLKDERVESLSRVPGLSTHAQVLTKMYTEQILRKHEMEAFEESLMPHQKAITAEGLPIPVSA 100
            E+   DL+ELLGKA+TCA+LG+AGPQRSR +G L +DER + L     L+ HA +L KMYTEQI+R   + AF ESLMPHQKA+   G+ IP +A
Sbjct:  213 EVVQDDLVELLGKAVTCALLGRAGPQRSRTLGALYQDERTQGLP----LAAHADILAKMYTEQIIRPGNLTAFVESLMPHQKALLGNGMTIPEAA 303          
BLAST of mRNA_H-paniculata_contig33317.8934.1 vs. uniprot
Match: A0A7S4HIZ8_9STRA (COP9 signalosome complex subunit 4 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HIZ8_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.750e-24
Identity = 50/102 (49.02%), Postives = 68/102 (66.67%), Query Frame = 0
Query:    1 KAKGFEIADGDLLELLGKAITCAVLGKAGPQRSRQMGVLLKDERVESLSRVPGLSTHAQVLTKMYTEQILRKHEMEAFEESLMPHQKAITAEGLPIPVSAMV 102
            +A+   I   DLL +LG+A TCA+L  +GPQR R +G++ KDER+  L  +P   TH+ VLTKMY  Q+LRK E+  FE SL PHQKA+  +GL I   A++
Sbjct:   80 QARSDMIDSDDLLNMLGRAATCAILAPSGPQRQRILGLVFKDERLSQLDSLPEFETHSAVLTKMYMNQVLRKDELTKFENSLAPHQKAVMGDGLTIVERAVI 181          
BLAST of mRNA_H-paniculata_contig33317.8934.1 vs. uniprot
Match: A0A7S4HJB9_9STRA (COP9 signalosome complex subunit 4 n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A7S4HJB9_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.070e-23
Identity = 50/102 (49.02%), Postives = 68/102 (66.67%), Query Frame = 0
Query:    1 KAKGFEIADGDLLELLGKAITCAVLGKAGPQRSRQMGVLLKDERVESLSRVPGLSTHAQVLTKMYTEQILRKHEMEAFEESLMPHQKAITAEGLPIPVSAMV 102
            +A+   I   DLL +LG+A TCA+L  +GPQR R +G++ KDER+  L  +P   TH+ VLTKMY  Q+LRK E+  FE SL PHQKA+  +GL I   A++
Sbjct:  202 QARSDMIDSDDLLNMLGRAATCAILAPSGPQRQRILGLVFKDERLSQLDSLPEFETHSAVLTKMYMNQVLRKDELTKFENSLAPHQKAVMGDGLTIVERAVI 303          
BLAST of mRNA_H-paniculata_contig33317.8934.1 vs. uniprot
Match: F0Y2X5_AURAN (COP9 signalosome complex subunit 4 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2X5_AURAN)

HSP 1 Score: 101 bits (251), Expect = 2.480e-23
Identity = 52/103 (50.49%), Postives = 73/103 (70.87%), Query Frame = 0
Query:    1 KAKGFEIADGDLLELLGKAITCAVLGKAGPQRSRQMGVLLKDERVES-LSRVPGLSTHAQVLTKMYTEQILRKHEMEAFEESLMPHQKAITAEGLPIPVSAMV 102
            +A+  E+   DLL LL KA+TCA+LG AGPQRSR +G+L KDERV S + +    + HA+VL +M+T Q++R  E+ AF  +L+PHQKA+  +GL IP  AM+
Sbjct:  190 QARHEEVNQDDLLALLSKAVTCALLGNAGPQRSRILGLLYKDERVTSQMEQSDAFAAHARVLKRMFTGQVVRTPEIAAFTATLLPHQKALLGDGLTIPEKAMI 292          
BLAST of mRNA_H-paniculata_contig33317.8934.1 vs. uniprot
Match: A0A7S1ZHU0_TRICV (COP9 signalosome complex subunit 4 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZHU0_TRICV)

HSP 1 Score: 100 bits (250), Expect = 4.460e-23
Identity = 48/96 (50.00%), Postives = 65/96 (67.71%), Query Frame = 0
Query:    7 IADGDLLELLGKAITCAVLGKAGPQRSRQMGVLLKDERVESLSRVPGLSTHAQVLTKMYTEQILRKHEMEAFEESLMPHQKAITAEGLPIPVSAMV 102
            I   +LL +LG+A TCA+L  +GPQR R +G++ KDER+  L  +P   TH+ VLTKMY  Q+LRK E+  FE SL PHQKA+  +GL I   A++
Sbjct:  221 IESDELLNMLGRAATCAILAPSGPQRQRILGLVFKDERLSQLDAMPEFETHSAVLTKMYMNQVLRKEELTKFENSLAPHQKAVMGDGLTIVERAVI 316          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33317.8934.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G354_ECTSI6.210e-4781.37COP9 signalosome complex subunit 4 n=1 Tax=Ectocar... [more]
A0A7S2FBM7_9STRA3.930e-2961.96COP9 signalosome complex subunit 4 n=1 Tax=Dictyoc... [more]
A0A835ZDX9_9STRA7.930e-2759.79COP9 signalosome complex subunit 4 n=1 Tax=Tribone... [more]
A0A7S3H9J9_9STRA1.770e-2654.84COP9 signalosome complex subunit 4 n=1 Tax=Spumell... [more]
A0A7S0SZ10_9STRA2.110e-2655.67COP9 signalosome complex subunit 4 (Fragment) n=2 ... [more]
A0A6V1T605_HETAK1.160e-2556.84COP9 signalosome complex subunit 4 n=1 Tax=Heteros... [more]
A0A7S4HIZ8_9STRA1.750e-2449.02COP9 signalosome complex subunit 4 n=1 Tax=Odontel... [more]
A0A7S4HJB9_9STRA1.070e-2349.02COP9 signalosome complex subunit 4 n=2 Tax=Odontel... [more]
F0Y2X5_AURAN2.480e-2350.49COP9 signalosome complex subunit 4 (Fragment) n=1 ... [more]
A0A7S1ZHU0_TRICV4.460e-2350.00COP9 signalosome complex subunit 4 (Fragment) n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR04013426S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4PANTHERPTHR1085526S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4coord: 6..96
IPR037754COP9 signalosome complex subunit 4PANTHERPTHR10855:SF2COP9 SIGNALOSOME COMPLEX SUBUNIT 4coord: 6..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig33317contigH-paniculata_contig33317:541..2145 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig33317.8934.1mRNA_H-paniculata_contig33317.8934.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig33317 541..2145 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig33317.8934.1 ID=prot_H-paniculata_contig33317.8934.1|Name=mRNA_H-paniculata_contig33317.8934.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp
KAKGFEIADGDLLELLGKAITCAVLGKAGPQRSRQMGVLLKDERVESLSR
VPGLSTHAQVLTKMYTEQILRKHEMEAFEESLMPHQKAITAEGLPIPVSA
MV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040134PSMD12/CSN4
IPR037754CSN4