prot_H-paniculata_contig3330.8925.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3330.8925.1
Unique Nameprot_H-paniculata_contig3330.8925.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length549
Homology
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BLAST of mRNA_H-paniculata_contig3330.8925.1 vs. uniprot
Match: D8LN70_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN70_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 2.030e-9
Identity = 126/364 (34.62%), Postives = 154/364 (42.31%), Query Frame = 0 
Query:  186 AAASGHLV---RVEQGP--RAGEGDTMPGLSSSGLGLMPDNWGILQYGLTLENPVA-----ASSLDASPGRKHRLRSGEHTDGLGGS----GHGGRGEDRSSGTGNDNSRLNGRVGVDGSPS---STVAMMMDSLSISDDTPHGDPRRSYAGKAKPREGAAGGALMFGRKGNSGHEGSDLAFPDGGASSGRLHEANHADEAGGGGLEGNGGGASFGFLDSRSPKFEPMSDERTSLRQXXXXXXLSHRK-QSIPP--PLHPTRALGGSPSLGPRHPRRSRPPRVNLDTGRFSPSVGGLP--------------DNVHGTDGSGRXXXXXXXXXXXXXXXSGRFRWSFPPPGMSG---GEVGDGPG 512
            AAA GH +     E+ P   A EG+ + G SS+  G   DNWGILQYGLTLE+PVA     A S  A+ G + + R  E  D  G S    G GG G   S        R +GR+G  G+ S   ++VAMMM SLSI+ D       +S AG+   R GA       GR G  G +      P+ G         N AD+    G           FLD                  XXXXXX      QS  P  PLHP R +GGSPSL P+      P R+  D G F  S                   D++HG+  +G                SG  RWSFPPPGM G   G  G+G G
Sbjct:  394 AAAGGHQLPSMATEKPPPGAAAEGNAVHGGSSTA-GPPVDNWGILQYGLTLEDPVAGHGSDAPSAAAADGSQRQQRLSEKMDSAGRSTAAEGRGGGGGQFSXXXXXXXXRGSGRLGGQGASSXXXASVAMMMGSLSIAGD-------QSAAGQ---RYGAGN---ELGRGGGGGGQ------PEDGV--------NFADDYDLVGPPDGXXXXXXXFLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSTAPRTPLHPRRGVGGSPSLTPQ------PRRLPHDVGGFPASGASAATXXXXXXNVTAMSTDHLHGSGSNGAVGGGAPLA-------SGLLRWSFPPPGMPGHPGGVTGEGDG 716
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3330.8925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LN70_ECTSI2.030e-934.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3330contigH-paniculata_contig3330:7803..9880 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3330.8925.1mRNA_H-paniculata_contig3330.8925.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3330 7803..9880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3330.8925.1 ID=prot_H-paniculata_contig3330.8925.1|Name=mRNA_H-paniculata_contig3330.8925.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=549bp
LNLGGFPVVRGGGRGRHGNFQDHASLSQQVTDEHGGRHETGGGRTPGLSK
SGRYLRNDSCGRGRHEALGAFHEAAEQEHSQLGAEAVNMRGNNQSNPLSY
ETYTVDGGGRRYDGSSSGGGGGGGASAAEASFTSAARESSSSFRISEGAV
EEVAATGDRDRTDFGDLRKPSSSSTDAAVAGVASVAAASGHLVRVEQGPR
AGEGDTMPGLSSSGLGLMPDNWGILQYGLTLENPVAASSLDASPGRKHRL
RSGEHTDGLGGSGHGGRGEDRSSGTGNDNSRLNGRVGVDGSPSSTVAMMM
DSLSISDDTPHGDPRRSYAGKAKPREGAAGGALMFGRKGNSGHEGSDLAF
PDGGASSGRLHEANHADEAGGGGLEGNGGGASFGFLDSRSPKFEPMSDER
TSLRQQQQQQQLSHRKQSIPPPLHPTRALGGSPSLGPRHPRRSRPPRVNL
DTGRFSPSVGGLPDNVHGTDGSGRGGAGAGAGTGAGAGSSGRFRWSFPPP
GMSGGEVGDGPGGALHQASMTHRLDELGATDGHGVGTGTGSGSSGDGNS
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