prot_H-paniculata_contig333.8921.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig333.8921.1
Unique Nameprot_H-paniculata_contig333.8921.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length163
Homology
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BLAST of mRNA_H-paniculata_contig333.8921.1 vs. uniprot
Match: D8LJW3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJW3_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 1.360e-15
Identity = 34/54 (62.96%), Postives = 43/54 (79.63%), Query Frame = 0 
Query:  107 LGYQLDLDRGCMVTAAEIDIPLEPDGTGLPAVSQWFCDSCASIETGVVACLAKR 160
            +GYQLDLDR C++TA+++DIP++   TGLP V QWFCDSC+S  TGVVA  A R
Sbjct:    1 MGYQLDLDRSCLITASDVDIPID-SVTGLPVVCQWFCDSCSSTVTGVVAATAGR 53
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig333.8921.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJW3_ECTSI1.360e-1562.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 60..151
e-value: 6.3E-7
score: 31.0
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 88..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig333contigH-paniculata_contig333:22643..23131 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig333.8921.1mRNA_H-paniculata_contig333.8921.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig333 20776..23212 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig333.8921.1 ID=prot_H-paniculata_contig333.8921.1|Name=mRNA_H-paniculata_contig333.8921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=163bp
MAKTTGKRKKQQAAPTVSTAEEEEEGLQGQEEQAGEVGCAICNHDRAVNC
AESPSGSAISSTASMAASNTQPQRMDNTHMEEQQQKEEPSFALRCNSCRK
WYHPWCLGYQLDLDRGCMVTAAEIDIPLEPDGTGLPAVSQWFCDSCASIE
TGVVACLAKRSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD