prot_H-paniculata_contig333.8919.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig333.8919.1
Unique Nameprot_H-paniculata_contig333.8919.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length394
Homology
BLAST of mRNA_H-paniculata_contig333.8919.1 vs. uniprot
Match: D8LJX0_ECTSI (MutS protein homolog 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX0_ECTSI)

HSP 1 Score: 324 bits (830), Expect = 3.610e-99
Identity = 176/259 (67.95%), Postives = 202/259 (77.99%), Query Frame = 0
Query:    1 MAQMGSFVPADVAVIPVRDRLLSRIGTGDDMENNVSTFLMEMREVSQALERVTSRSLVLIDELGRGTSNQEGLAIAWAVAEKLLSSCAYTLFVTHYTQIPGLADLYPNVKNIHLETAVMTSSAG---------KTTGLRYLHKAQEGRCNPGDAYGIRTAEMCGLPWEIVEDARALRAQVIANAKAKSIQGSTGALSQGEYDAHELLRTLAMLKGSTMDDSTLREFLHVLSLDY-KASKTERITATLSAVTRSVGATAA 249
            MAQMG +VPA++AVIPVR  LLSRIGTGDD+ENNVSTFLMEMRE++Q          V+IDELGRGTSN+EGLA+AWAVAEKLLSS AYTLFVTHY+Q+PGLADLYPNV+NIHL+TA+  ++A          +T  LRYLHKA +GRC+PGD YGIRTAEMCGLPWEIVE+AR LR QVI   KAK I+GS GA S+ E DA+ELLRTLA LKGSTMD   LREFLHVLSL+Y K  K  RI A+L   T + G  AA
Sbjct:  575 MAQMGCYVPAEMAVIPVRTSLLSRIGTGDDLENNVSTFLMEMREIAQ----------VMIDELGRGTSNREGLAVAWAVAEKLLSSSAYTLFVTHYSQMPGLADLYPNVENIHLQTALAPAAAXXXXXXXXXXQTGALRYLHKALDGRCDPGDGYGIRTAEMCGLPWEIVEEARVLRTQVIDATKAKEIKGSAGAPSEAEKDAYELLRTLATLKGSTMDPIALREFLHVLSLEYGKGPKGARILASLPPSTTTHGTDAA 823          
BLAST of mRNA_H-paniculata_contig333.8919.1 vs. uniprot
Match: A0A6H5JUC5_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC5_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 3.180e-98
Identity = 156/210 (74.29%), Postives = 179/210 (85.24%), Query Frame = 0
Query:    1 MAQMGSFVPADVAVIPVRDRLLSRIGTGDDMENNVSTFLMEMREVSQALERVTSRSLVLIDELGRGTSNQEGLAIAWAVAEKLLSSCAYTLFVTHYTQIPGLADLYPNVKNIHLETAVMTSSA---------GKTTGLRYLHKAQEGRCNPGDAYGIRTAEMCGLPWEIVEDARALRAQVIANAKAKSIQGSTGALSQGEYDAHELLRTL 201
            MAQMG +VPA++AVIPVR  LLSRIGTGDD+ENNVSTFLMEMRE++Q LERVTSRSLV+IDELGRGTSN+EGLA+AWAVAE+LLSS AYTLFVTHY+Q+PGLADLYPNV+NIHL+TA+  ++          G T  LRYLHKA +GRC+PGD YGIRTAEMCGLPWEIVE+AR LR QVI   KAK I+GS GALS+ E DA+ELLRTL
Sbjct:  238 MAQMGCYVPAEMAVIPVRTSLLSRIGTGDDLENNVSTFLMEMREIAQVLERVTSRSLVMIDELGRGTSNREGLAVAWAVAEQLLSSSAYTLFVTHYSQMPGLADLYPNVENIHLQTALAPAATATGATGGMGGHTGALRYLHKALDGRCDPGDGYGIRTAEMCGLPWEIVEEARVLRTQVIDATKAKEIKGSAGALSEAEKDAYELLRTL 447          
BLAST of mRNA_H-paniculata_contig333.8919.1 vs. uniprot
Match: A0A812XQZ9_SYMMI (MSH4 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XQZ9_SYMMI)

HSP 1 Score: 194 bits (494), Expect = 9.980e-56
Identity = 106/224 (47.32%), Postives = 146/224 (65.18%), Query Frame = 0
Query:    1 MAQMGSFVPADVAVIPVRDRLLSRIGTGDDMENNVSTFLMEMREVSQALERVTSRSLVLIDELGRGTSNQEGLAIAWAVAEKLLSSCAYTLFVTHYTQIPGLADLYPNVKNIHLETAVMTSSAGKTTGLRYLHKAQEGRCNPGDAYGIRTAEMCGLPWEIVEDARALRAQVIANAKAKSIQGSTGALSQGE--YDAHELLRTLAMLKGSTMDDSTLREFLHVLS 222
            MAQMG +VPA  AV+P+RD++ SRIGTGDDMENN+S+F +EM+E +  L  ++ +SLV++DELGRGTSN +G+AIA AV E LLS+ AYT FVTHY+Q+  LA +Y NVKN+H  T V   S+     L YLHK  EG C+    YG+  AE CGL  E +  AR  + + +      +++   G +S     + A  L++ L +LK ST+DD  +R +L  LS
Sbjct:   82 MAQMGCYVPARHAVVPIRDQIFSRIGTGDDMENNLSSFQVEMKETAHVLRSLSDQSLVIVDELGRGTSNADGVAIALAVGEYLLSTAAYTFFVTHYSQVAALAAMYANVKNVHFLTTVDVGSSA----LGYLHKIAEGPCDMKSGYGLLVAESCGLSEEFIAMARDFQRR-LRRTYPLALRTREGVVSAAARMHRATALVQRLVILKDSTLDDGGIRSYLAGLS 300          
BLAST of mRNA_H-paniculata_contig333.8919.1 vs. uniprot
Match: A0A7S2UJ16_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJ16_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.880e-49
Identity = 88/171 (51.46%), Postives = 118/171 (69.01%), Query Frame = 0
Query:    1 MAQMGSFVPADVAVIPVRDRLLSRIGTGDDMENNVSTFLMEMREVSQALERVTSRSLVLIDELGRGTSNQEGLAIAWAVAEKLLSSCAYTLFVTHYTQIPGLADLYPNVKNIHLETAVMTSSAGKTTGLRYLHKAQEGRCNPGDAYGIRTAEMCGLPWEIVEDARALRAQV 171
            +AQ GS++PA+ A IPVRDRL +RIGT DD E+N+STF++EM+E +      T +SL+L+DELGR TSN++G+AIAWAV+E LL   A+T FVTHY Q+  LAD+YPNV+N HL   +    +G+   +RY HK   G C     YG+  A  CG P +IV++AR LR  V
Sbjct:   15 LAQCGSYIPAEEAFIPVRDRLCTRIGTADDQEHNISTFMLEMKETAFICRNATHKSLILMDELGRATSNEDGVAIAWAVSEFLLVKRAFTFFVTHYPQLSSLADVYPNVQNQHLGATISAERSGE---IRYTHKIMPGPCIMSTDYGVEMAATCGWPADIVKEARLLRTHV 182          
BLAST of mRNA_H-paniculata_contig333.8919.1 vs. uniprot
Match: A0A485LLE7_9STRA (Aste57867_22902 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLE7_9STRA)

HSP 1 Score: 172 bits (436), Expect = 4.800e-46
Identity = 97/215 (45.12%), Postives = 133/215 (61.86%), Query Frame = 0
Query:    1 MAQMGSFVPADVAVIPVRDRLLSRIGTGDDMENNVSTFLMEMREVSQALERVTSRSLVLIDELGRGTSNQEGLAIAWAVAEKLLSSCAYTLFVTHYTQIPGLADLYPNVKNIHLETAVMTSSAGKTTGLRYLHKAQEGRCNPGDAYGIRTAEMCGLPWEIVEDARALRAQVIANAKAKSIQGSTGALSQGEYDAHELLRTLAMLKGSTMDDSTLR 215
            +A +G +VPA  A IP+RDRL +R GT DDM+ N STF +EM+E +  L+  T+RSLVL+DELGRGTSN EG AIAW+V E L+++ AY LF TH+  +  LADLYPN +N HL+     +S   T  LR+ +K Q+G       YG++ A +CGLP EI EDA  L   V     A+  +    A  +     + LL++L  L+ S +D+  LR
Sbjct:  193 LAHIGCYVPAIEATIPLRDRLFTRFGTSDDMQENASTFTVEMQETAFILDNCTTRSLVLMDELGRGTSNDEGFAIAWSVCETLMNTGAYCLFSTHFHGLRELADLYPNCRNCHLQ-----ASTTDTNILRFQYKLQDGPTELRHGYGLKMARVCGLPKEICEDAEMLHPHV-----AQREENLVAANDETCALQNMLLQSLMALRYSKLDEKELR 397          
BLAST of mRNA_H-paniculata_contig333.8919.1 vs. uniprot
Match: A0A225X3Z3_9STRA (DNA mismatch repair protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3Z3_9STRA)

HSP 1 Score: 162 bits (409), Expect = 3.800e-44
Identity = 92/215 (42.79%), Postives = 129/215 (60.00%), Query Frame = 0
Query:    1 MAQMGSFVPADVAVIPVRDRLLSRIGTGDDMENNVSTFLMEMREVSQALERVTSRSLVLIDELGRGTSNQEGLAIAWAVAEKLLSSCAYTLFVTHYTQIPGLADLYPNVKNIHLETAVMTSSAGKTTGLRYLHKAQEGRCNPGDAYGIRTAEMCGLPWEIVEDARALRAQVIANAKAKSIQGSTGALSQGEYDAHELLRTLAMLKGSTMDDSTLR 215
            MAQMG +VPA  A IP+RDR+ +R GT DDME N S+F +EM E +  LE  T+RSLVLIDELGRGT+N EG AIAW++AE+++   +YT F THY Q+  LA LYP  +  H+ T + T+S      + + H  ++G       YGI+TA + GLP EI+ +A  +  ++  N +A     ST   +        LL  L  L+ + +D + LR
Sbjct:    1 MAQMGCYVPATQASIPIRDRICTRFGTSDDMEENASSFAVEMTETAFILEACTTRSLVLIDELGRGTANDEGAAIAWSIAEEIIQRGSYTCFATHYHQLNRLAQLYPRCRCYHMGTELNTNS------VHFRHVLKDGPYPSTGLYGIKTAALSGLPVEIIREAERIYEKLRINREATENAVST--TNNATRINRNLLHHLYALRYADLDYAGLR 207          
BLAST of mRNA_H-paniculata_contig333.8919.1 vs. uniprot
Match: A0A1V9Y5B5_9STRA (DNA mismatch repair protein mutS n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5B5_9STRA)

HSP 1 Score: 161 bits (408), Expect = 4.230e-44
Identity = 89/218 (40.83%), Postives = 135/218 (61.93%), Query Frame = 0
Query:    4 MGSFVPADVAVIPVRDRLLSRIGTGDDMENNVSTFLMEMREVSQALERVTSRSLVLIDELGRGTSNQEGLAIAWAVAEKLLSSCAYTLFVTHYTQIPGLADLYPNVKNIHLETAVMTSSAGKTTGLRYLHKAQEGRCNPGDAYGIRTAEMCGLPWEIVEDARALRAQVIANAKAKSIQGSTGALSQGEYDAHELLRTLAMLKGSTMDDSTLREFLHVL 221
            MG FVPA  A IP+R R+ +R GT DDME N STF +EM E++  L+ ++S+SL+LIDELGRGTSN+EGLAIAW+  E L+ + AYT F TH+  +  L+ +Y N +N HLE +  +++      L + +K   G  +    YGI+ A++CGLP E V DA  L+  ++A+   +++  +    ++ +   ++LL  L  L  + +D+  LR  LH L
Sbjct:    1 MGCFVPAAEAHIPLRTRIFTRFGTSDDMEENASTFTVEMLELAFILDNLSSKSLILIDELGRGTSNEEGLAIAWSTCETLMHTKAYTCFATHFHGLRELSTMYANCRNFHLEASNTSANL-----LAFKYKLSNGPSDRSHGYGIQMAKVCGLPTETVRDAEQLKEAMLAS---QNMDPNIIVDTRNKNLNNKLLHHLMALGHANLDNDALRRRLHRL 210          
BLAST of mRNA_H-paniculata_contig333.8919.1 vs. uniprot
Match: D0N2V3_PHYIT (DNA mismatch repair protein mutS, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N2V3_PHYIT)

HSP 1 Score: 167 bits (423), Expect = 5.660e-44
Identity = 96/232 (41.38%), Postives = 136/232 (58.62%), Query Frame = 0
Query:    1 MAQMGSFVPADVAVIPVRDRLLSRIGTGDDMENNVSTFLMEMREVSQALERVTSRSLVLIDELGRGTSNQEGLAIAWAVAEKLLSSCAYTLFVTHYTQIPGLADLYPNVKNIHLETAVMTSSAGKTTGLRYLHKAQEGRCNPGDAYGIRTAEMCGLPWEIVEDARALRAQVIANAKA-KSIQGSTGALSQGEYDAHELLRTLAMLKGSTMDDSTLREFLHVLSLDYKASKTE 231
            MAQMG +VPA  A+IP+RDR+ +R GT DDME N STF +EM E +  LE  T +SL+LIDELGRGTSN EG AIAW++AE+++   +YT F THY Q+  LA +YP  +  H+ T   TSS       RY+ K  +G       YGI+TA +CGLP E++ +A     ++ ++ +A ++      A +        LL  L  L+ + +D++ LR  L  L   +    TE
Sbjct:  203 MAQMGCYVPASKAIIPIRDRICTRFGTSDDMEENASTFAVEMTETAFILEASTPKSLILIDELGRGTSNDEGAAIAWSIAEEIIDRGSYTCFATHYHQLNRLAQMYPRCRCYHMGTESNTSSVS----FRYILK--DGPFPSTGMYGIKTAALCGLPAELIREAERTYEKLRSDREAAETATNQDSATNDTSKINRNLLHHLYALRYADLDNAGLRRQLQYLRNRFLVPATE 428          
BLAST of mRNA_H-paniculata_contig333.8919.1 vs. uniprot
Match: A0A024FYL5_9STRA (DNA_MISMATCH_REPAIR_2 domain-containing protein n=7 Tax=Albugo candida TaxID=65357 RepID=A0A024FYL5_9STRA)

HSP 1 Score: 166 bits (419), Expect = 9.370e-44
Identity = 92/221 (41.63%), Postives = 134/221 (60.63%), Query Frame = 0
Query:    1 MAQMGSFVPADVAVIPVRDRLLSRIGTGDDMENNVSTFLMEMREVSQALERVTSRSLVLIDELGRGTSNQEGLAIAWAVAEKLLSSCAYTLFVTHYTQIPGLADLYPNVKNIHLETAVMTSSAGKTTGLRYLHKAQEGRCNPGDAYGIRTAEMCGLPWEIVEDARALRAQVIANAKAKSIQGSTGALSQGEYDAHELLRTLAMLKGSTMDDSTLREFLHVL 221
            +A MG +VPA  A +P+RDR+ +R GT DDME N STF +EM E +  LE+ T  SLVL+DELGRGT++ EG A+AW+++E L++   YT F TH+ Q+  LA++Y N K  HL      +++   T +RY H   +G C     YGI+ A+MCGLP +I+ DA  +  ++ +N    SI+ ST  +S G  ++  L   LA++    +D   LR  L  L
Sbjct:  171 LAHMGCYVPAVAAFLPLRDRICTRFGTSDDMEENASTFKVEMTETAFILEKATKASLVLVDELGRGTASDEGCALAWSISENLIAKGIYTCFATHFRQLNELANVYINCKCYHL------AASFSETNVRYFHTLNDGACPEYPKYGIQAAKMCGLPMQIIRDAEEIYDRLKSNQH--SIKTSTS-VSVGRVESRLLHHLLALIHAG-LDKKALRVQLQSL 381          
BLAST of mRNA_H-paniculata_contig333.8919.1 vs. uniprot
Match: Q54QB8_DICDI (DNA mismatch repair protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54QB8_DICDI)

HSP 1 Score: 171 bits (433), Expect = 3.980e-43
Identity = 91/233 (39.06%), Postives = 145/233 (62.23%), Query Frame = 0
Query:    1 MAQMGSFVPADVAVIPVRDRLLSRIGTGDDMENNVSTFLMEMREVSQALERVTSRSLVLIDELGRGTSNQEGLAIAWAVAEKLLSSCAYTLFVTHYTQIPGLADLYPNVKNIHLETAVMTSSAGKTTGLRYLHKAQEGRCNPGDAYGIRTAEMCGLPWEIVEDARALRAQVIANAKAKSIQGSTGALSQGEY-----DAHELLRTLAMLKGSTMDDSTLREFLHVLSLDYKAS 228
            +A +G F+PA+ A +P+ D+++SR+GT D++++N STF+ EM+E+S  LE  T  SLV+IDELGRGTSN +G +IAW+++E L     YTLFVTHY Q+  LA  YPN++  H + +   SS     GL+Y +   EG  +  D+YG+ TAE+ G+  ++++ A+ +R  + + +    I  +T   S  +Y     D+++LL+ L  LK S + D  L+ +L  L  D+  S
Sbjct:  815 VAHIGYFLPAEFATVPIVDQIISRLGTSDNIQSNASTFMTEMKEISYILENTTESSLVIIDELGRGTSNMDGSSIAWSISEHLSMIGCYTLFVTHYQQLLNLATFYPNIRVYHFQVSKDDSS-----GLKYNYLFSEG-VSSIDSYGVETAELAGIDSKVIQSAKTIRNLLESKSNNNQINPNTNNQSINQYHHPSRDSYQLLQKLLNLKFSKLSDVQLKNYLLKLKEDFNFS 1041          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig333.8919.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJX0_ECTSI3.610e-9967.95MutS protein homolog 4 n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JUC5_9PHAE3.180e-9874.29DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A812XQZ9_SYMMI9.980e-5647.32MSH4 protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A7S2UJ16_9STRA1.880e-4951.46Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A485LLE7_9STRA4.800e-4645.12Aste57867_22902 protein n=1 Tax=Aphanomyces stella... [more]
A0A225X3Z3_9STRA3.800e-4442.79DNA mismatch repair protein n=1 Tax=Phytophthora m... [more]
A0A1V9Y5B5_9STRA4.230e-4440.83DNA mismatch repair protein mutS n=1 Tax=Achlya hy... [more]
D0N2V3_PHYIT5.660e-4441.38DNA mismatch repair protein mutS, putative n=1 Tax... [more]
A0A024FYL5_9STRA9.370e-4441.63DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
Q54QB8_DICDI3.980e-4339.06DNA mismatch repair protein n=1 Tax=Dictyostelium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000432DNA mismatch repair protein MutS, C-terminalSMARTSM00534mutATP5coord: 1..169
e-value: 7.4E-51
score: 185.0
IPR000432DNA mismatch repair protein MutS, C-terminalPFAMPF00488MutS_Vcoord: 1..169
e-value: 5.9E-49
score: 166.6
IPR000432DNA mismatch repair protein MutS, C-terminalPROSITEPS00486DNA_MISMATCH_REPAIR_2coord: 56..72
NoneNo IPR availableGENE3D3.40.50.300coord: 1..244
e-value: 3.4E-58
score: 199.1
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 1..219
NoneNo IPR availablePANTHERPTHR11361:SF21MUTS PROTEIN HOMOLOG 4coord: 1..219
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig333contigH-paniculata_contig333:5395..9790 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig333.8919.1mRNA_H-paniculata_contig333.8919.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig333 5378..10490 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig333.8919.1 ID=prot_H-paniculata_contig333.8919.1|Name=mRNA_H-paniculata_contig333.8919.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=394bp
MAQMGSFVPADVAVIPVRDRLLSRIGTGDDMENNVSTFLMEMREVSQALE
RVTSRSLVLIDELGRGTSNQEGLAIAWAVAEKLLSSCAYTLFVTHYTQIP
GLADLYPNVKNIHLETAVMTSSAGKTTGLRYLHKAQEGRCNPGDAYGIRT
AEMCGLPWEIVEDARALRAQVIANAKAKSIQGSTGALSQGEYDAHELLRT
LAMLKGSTMDDSTLREFLHVLSLDYKASKTERITATLSAVTRSVGATAAS
KTTTEPDAALGYEKDGVGLAQEGGPHSPAAAPTYSGEMLDATGATERGLP
SPPTQDLSTSTISAAAQTTGCIDAVDGRATVRDRNVGSGSGDGGECVGAA
TISSTELDMSPANTRTDEFSGNFGSIAEAGTAIGKVSISGGGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000432DNA_mismatch_repair_MutS_C
IPR027417P-loop_NTPase