prot_H-paniculata_contig33188.8903.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig33188.8903.1
Unique Nameprot_H-paniculata_contig33188.8903.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length45
Homology
BLAST of mRNA_H-paniculata_contig33188.8903.1 vs. uniprot
Match: A0A8F0F735_9PHAE (Photosystem II reaction center protein K n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F735_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 5.940e-19
Identity = 42/44 (95.45%), Postives = 44/44 (100.00%), Query Frame = 0
Query:    1 MVILFLNKLPDLYLIFSPVVDILPIVPVLFLLLAFLWQASVGFR 44
            MVILFLNKLP+LYLIFSPVVDILP+VPVLFLLLAFLWQASVGFR
Sbjct:    1 MVILFLNKLPELYLIFSPVVDILPVVPVLFLLLAFLWQASVGFR 44          
BLAST of mRNA_H-paniculata_contig33188.8903.1 vs. uniprot
Match: A0A2I4Q318_9PHAE (Photosystem II reaction center protein K n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q318_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 2.850e-17
Identity = 37/44 (84.09%), Postives = 44/44 (100.00%), Query Frame = 0
Query:    1 MVILFLNKLPDLYLIFSPVVDILPIVPVLFLLLAFLWQASVGFR 44
            MV++FLNKLP+LY+IFSP+VDILP++PVLFLLLAFLWQASVGFR
Sbjct:    1 MVVVFLNKLPELYVIFSPLVDILPVIPVLFLLLAFLWQASVGFR 44          
BLAST of mRNA_H-paniculata_contig33188.8903.1 vs. uniprot
Match: A0A1L2F1W9_9PHAE (Photosystem II reaction center protein K n=3 Tax=Fucales TaxID=3009 RepID=A0A1L2F1W9_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 6.510e-14
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 0
Query:    6 LNKLPDLYLIFSPVVDILPIVPVLFLLLAFLWQASVGFR 44
            L KLP+LY I+SP+VDILPI+PVLFLLLAFLWQASVGFR
Sbjct:    6 LTKLPELYAIYSPIVDILPIIPVLFLLLAFLWQASVGFR 44          
BLAST of mRNA_H-paniculata_contig33188.8903.1 vs. uniprot
Match: A0A7S6U9V7_9STRA (Photosystem II reaction center protein K n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9V7_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 9.260e-14
Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    1 MVILFLNKLPDLYLIFSPVVDILPIVPVLFLLLAFLWQASVGFR 44
            M I+ ++KLPD Y IFSP++DILPIVPVLFLLLAF+WQA+VGFR
Sbjct:    1 MEIILISKLPDAYTIFSPIIDILPIVPVLFLLLAFVWQAAVGFR 44          
BLAST of mRNA_H-paniculata_contig33188.8903.1 vs. uniprot
Match: A0A4D6UYV7_9FLOR (Photosystem II reaction center protein K n=4 Tax=Rhodomelaceae TaxID=2803 RepID=A0A4D6UYV7_9FLOR)

HSP 1 Score: 65.1 bits (157), Expect = 3.860e-13
Identity = 31/42 (73.81%), Postives = 38/42 (90.48%), Query Frame = 0
Query:    3 ILFLNKLPDLYLIFSPVVDILPIVPVLFLLLAFLWQASVGFR 44
            I+FL KLPD YL+F P+VDILPI+PV FLLLAF+WQA++GFR
Sbjct:    4 IVFLTKLPDTYLLFRPLVDILPIIPVFFLLLAFVWQAAIGFR 45          
BLAST of mRNA_H-paniculata_contig33188.8903.1 vs. uniprot
Match: A0A4D6WPC3_9FLOR (Photosystem II reaction center protein K n=1 Tax=Compsothamnion thuyoides TaxID=536591 RepID=A0A4D6WPC3_9FLOR)

HSP 1 Score: 64.7 bits (156), Expect = 5.480e-13
Identity = 31/39 (79.49%), Postives = 36/39 (92.31%), Query Frame = 0
Query:    6 LNKLPDLYLIFSPVVDILPIVPVLFLLLAFLWQASVGFR 44
            LNKLPD Y+IF P+VDILPI+PV FLLLAF+WQA+VGFR
Sbjct:    7 LNKLPDAYIIFRPLVDILPIIPVFFLLLAFVWQAAVGFR 45          
BLAST of mRNA_H-paniculata_contig33188.8903.1 vs. uniprot
Match: A0A1Z1MAU6_9FLOR (Photosystem II reaction center protein K n=9 Tax=Rhodomelaceae TaxID=2803 RepID=A0A1Z1MAU6_9FLOR)

HSP 1 Score: 64.3 bits (155), Expect = 7.790e-13
Identity = 30/41 (73.17%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    4 LFLNKLPDLYLIFSPVVDILPIVPVLFLLLAFLWQASVGFR 44
            LFL KLPD Y++F P+VDILPI+PV FLLLAF+WQA++GFR
Sbjct:    5 LFLTKLPDAYILFRPLVDILPIIPVFFLLLAFVWQAAIGFR 45          
BLAST of mRNA_H-paniculata_contig33188.8903.1 vs. uniprot
Match: A0A024B2Z0_KLEFL (Photosystem II reaction center protein K n=3 Tax=Klebsormidium TaxID=3174 RepID=A0A024B2Z0_KLEFL)

HSP 1 Score: 64.7 bits (156), Expect = 7.910e-13
Identity = 31/42 (73.81%), Postives = 37/42 (88.10%), Query Frame = 0
Query:    3 ILFLNKLPDLYLIFSPVVDILPIVPVLFLLLAFLWQASVGFR 44
            ILFL KLP+ Y IF P+VD+LP++PVLFLLLAF+WQASV FR
Sbjct:   20 ILFLGKLPEAYAIFDPIVDVLPVIPVLFLLLAFVWQASVSFR 61          
BLAST of mRNA_H-paniculata_contig33188.8903.1 vs. uniprot
Match: A0A4D6WSL2_9FLOR (Photosystem II reaction center protein K n=1 Tax=Crouania attenuata TaxID=42002 RepID=A0A4D6WSL2_9FLOR)

HSP 1 Score: 63.9 bits (154), Expect = 1.110e-12
Identity = 30/42 (71.43%), Postives = 38/42 (90.48%), Query Frame = 0
Query:    3 ILFLNKLPDLYLIFSPVVDILPIVPVLFLLLAFLWQASVGFR 44
            IL ++KLPD YLIF P+VDILP++PV FLLLAF+WQA++GFR
Sbjct:    4 ILIISKLPDAYLIFRPLVDILPVIPVFFLLLAFVWQAAIGFR 45          
BLAST of mRNA_H-paniculata_contig33188.8903.1 vs. uniprot
Match: A0A1Y9TMC7_9RHOD (Photosystem II reaction center protein K n=1 Tax=Bulboplastis apyrenoidosa TaxID=1070855 RepID=A0A1Y9TMC7_9RHOD)

HSP 1 Score: 63.9 bits (154), Expect = 1.110e-12
Identity = 30/41 (73.17%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    4 LFLNKLPDLYLIFSPVVDILPIVPVLFLLLAFLWQASVGFR 44
            L LNKLP++Y IF P++DILP+VPV FLLLAF+WQA+VGFR
Sbjct:    5 LLLNKLPEIYTIFKPLIDILPVVPVFFLLLAFVWQAAVGFR 45          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33188.8903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0F735_9PHAE5.940e-1995.45Photosystem II reaction center protein K n=1 Tax=P... [more]
A0A2I4Q318_9PHAE2.850e-1784.09Photosystem II reaction center protein K n=1 Tax=D... [more]
A0A1L2F1W9_9PHAE6.510e-1484.62Photosystem II reaction center protein K n=3 Tax=F... [more]
A0A7S6U9V7_9STRA9.260e-1475.00Photosystem II reaction center protein K n=1 Tax=S... [more]
A0A4D6UYV7_9FLOR3.860e-1373.81Photosystem II reaction center protein K n=4 Tax=R... [more]
A0A4D6WPC3_9FLOR5.480e-1379.49Photosystem II reaction center protein K n=1 Tax=C... [more]
A0A1Z1MAU6_9FLOR7.790e-1373.17Photosystem II reaction center protein K n=9 Tax=R... [more]
A0A024B2Z0_KLEFL7.910e-1373.81Photosystem II reaction center protein K n=3 Tax=K... [more]
A0A4D6WSL2_9FLOR1.110e-1271.43Photosystem II reaction center protein K n=1 Tax=C... [more]
A0A1Y9TMC7_9RHOD1.110e-1273.17Photosystem II reaction center protein K n=1 Tax=B... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003687Photosystem II PsbKPFAMPF02533PsbKcoord: 5..44
e-value: 2.3E-21
score: 75.7
IPR003687Photosystem II PsbKPANTHERPTHR35325FAMILY NOT NAMEDcoord: 4..44
IPR003687Photosystem II PsbKHAMAPMF_00441PSII_PsbKcoord: 6..44
score: 17.558
NoneNo IPR availablePANTHERPTHR35325:SF1PHOTOSYSTEM II REACTION CENTER PROTEIN Kcoord: 4..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePRODOMPD004458coord: 4..44
e-value: 0.003
score: 90.0
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
IPR037270Photosystem II PsbK superfamilySUPERFAMILY161037Photosystem II reaction center protein K, PsbKcoord: 8..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig33188contigH-paniculata_contig33188:2258..2392 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig33188.8903.1mRNA_H-paniculata_contig33188.8903.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig33188 2258..2392 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig33188.8903.1 ID=prot_H-paniculata_contig33188.8903.1|Name=mRNA_H-paniculata_contig33188.8903.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=45bp
MVILFLNKLPDLYLIFSPVVDILPIVPVLFLLLAFLWQASVGFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003687PSII_PsbK
IPR037270PSII_PsbK_sf