prot_H-paniculata_contig33184.8901.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig33184.8901.1
Unique Name	prot_H-paniculata_contig33184.8901.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	107

Homology

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BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A6H5KNX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX7_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 1.110e-48
Identity = 83/99 (83.84%), Postives = 92/99 (92.93%), Query Frame = 0

Query:    7 RKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIK 105
            R+VTLLGQNVDAYGRDM PR  FADLLHYV+DVPGIER+RFVTSHPRYMSL VV+AVA LP+MAECFMVPFQSGDNEVL+NMRRGYT+  YMRII+RI+
Sbjct:  481 REVTLLGQNVDAYGRDMNPRNSFADLLHYVSDVPGIERVRFVTSHPRYMSLDVVDAVANLPSMAECFMVPFQSGDNEVLKNMRRGYTITRYMRIIDRIR 579

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BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A7S2V0W1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0W1_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.000e-47
Identity = 78/99 (78.79%), Postives = 90/99 (90.91%), Query Frame = 0

Query:    7 RKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIK 105
            R++TLLGQN+DAYGRDM P+Q FADLLHYV+DVPGIERIRFVTSHPRYMSL+VV+AVA LP M E F VPFQSGD++VL+NM RGYTV+ YM+IINRIK
Sbjct:  105 REITLLGQNIDAYGRDMQPKQTFADLLHYVSDVPGIERIRFVTSHPRYMSLKVVDAVASLPTMCENFYVPFQSGDDQVLKNMGRGYTVDRYMQIINRIK 203

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BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A835YXD9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXD9_9STRA)

HSP 1 Score: 155 bits (391), Expect = 8.970e-43
Identity = 74/99 (74.75%), Postives = 87/99 (87.88%), Query Frame = 0

Query:    7 RKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIK 105
            R++TLLGQN+DAYGRDM P+Q FADLLHY+ DV GIERIR+VTSHPRYMS RVV+AVA L  + EC+ VPFQSGD+EVLR MRRGYT ++YMRII+RIK
Sbjct:  255 REITLLGQNIDAYGRDMSPKQTFADLLHYLNDVEGIERIRYVTSHPRYMSERVVDAVANLDKVCECYHVPFQSGDDEVLRRMRRGYTHDSYMRIIDRIK 353

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BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A7S1KEP4_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1KEP4_9ALVE)

HSP 1 Score: 148 bits (374), Expect = 3.760e-42
Identity = 67/99 (67.68%), Postives = 89/99 (89.90%), Query Frame = 0

Query:    7 RKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIK 105
            ++VTLLGQN+D++GRDM P+++F+DLLH+VAD PG+ERIRFVTSHPRY+S RVV+AVA+ P++ E F +PFQ+GDNEVLRNMRRGYT E Y+ +I+RI+
Sbjct:   57 KEVTLLGQNIDSWGRDMHPKRKFSDLLHHVADTPGVERIRFVTSHPRYISERVVDAVAEHPSLMEYFHIPFQAGDNEVLRNMRRGYTRERYLHVIDRIR 155

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BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A7S4DL29_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL29_HETAK)

HSP 1 Score: 151 bits (381), Expect = 4.400e-41
Identity = 71/99 (71.72%), Postives = 86/99 (86.87%), Query Frame = 0

Query:    7 RKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIK 105
            R++TLLGQN+DAYGRDM P+Q FADLLHYVA VPGI R+R+VTSHPRYMS RVV+AVA LP + ECF VP QSG ++VL+ MRRGYTVE Y++I++RIK
Sbjct:  295 REITLLGQNIDAYGRDMAPKQSFADLLHYVAAVPGIARVRYVTSHPRYMSERVVDAVAALPGVMECFYVPPQSGSDKVLKLMRRGYTVEKYLKIVDRIK 393

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BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A7S2AZH5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZH5_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.240e-40
Identity = 70/105 (66.67%), Postives = 86/105 (81.90%), Query Frame = 0

Query:    1 LCTSVKRKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIK 105
            L  S  +++TLLGQN+DA+GRDM P+Q+F+DLL +VADVPGIER+RFVTSHPRYMS RVV+AVA  P + E F VPFQSGDN VL  MRRGYT E Y++I+ RI+
Sbjct:   94 LAKSGYKEITLLGQNIDAWGRDMSPKQKFSDLLLHVADVPGIERVRFVTSHPRYMSDRVVDAVASEPKLCEVFHVPFQSGDNTVLARMRRGYTRERYLQIVKRIR 198

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BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A7R9VDU1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VDU1_9STRA)

HSP 1 Score: 141 bits (356), Expect = 7.590e-40
Identity = 70/101 (69.31%), Postives = 86/101 (85.15%), Query Frame = 0

Query:    7 RKVTLLGQNVDAYGRDMVPRQRFADLLHYVAD--VPG-IERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRI 104
            ++VTLLGQN+DAYGRDMVPR+ FADLLHY+ D   PG IER+R+VTSHPRY S RV++AVA L  + ECF +PFQSGDN VL++MRRGYT E+YMRII++I
Sbjct:  150 KEVTLLGQNIDAYGRDMVPRRTFADLLHYLNDNLPPGTIERVRYVTSHPRYFSDRVIDAVANLDKVCECFHMPFQSGDNGVLKDMRRGYTFESYMRIISKI 250

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BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A0G4ERE5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERE5_VITBC)

HSP 1 Score: 148 bits (374), Expect = 1.400e-39
Identity = 67/99 (67.68%), Postives = 89/99 (89.90%), Query Frame = 0

Query:    7 RKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIK 105
            ++VTLLGQN+D++GRDM P+++F+DLLH+VAD PG+ERIRFVTSHPRY+S RVV+AVA+ P++ E F +PFQ+GDNEVLRNMRRGYT E Y+ +I+RI+
Sbjct:  383 KEVTLLGQNIDSWGRDMHPKRKFSDLLHHVADTPGVERIRFVTSHPRYISERVVDAVAEHPSLMEYFHIPFQAGDNEVLRNMRRGYTRERYLHVIDRIR 481

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BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A7S1FRF9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRF9_9STRA)

HSP 1 Score: 141 bits (355), Expect = 2.040e-39
Identity = 66/99 (66.67%), Postives = 83/99 (83.84%), Query Frame = 0

Query:    7 RKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIK 105
            ++VTLLGQN+DAYGRDM P+  FADLL+   +V GIER+R+VTSHPRY S RV++AVA L  + ECF VPFQ+GD+EVLR MRRGYT ++YM+IIN+IK
Sbjct:   35 KEVTLLGQNIDAYGRDMSPKTTFADLLYAANNVQGIERVRYVTSHPRYFSDRVIDAVANLDKVCECFHVPFQAGDDEVLRRMRRGYTFDSYMKIINKIK 133

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BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A7S3DWS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DWS7_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.340e-37
Identity = 64/101 (63.37%), Postives = 85/101 (84.16%), Query Frame = 0

Query:    7 RKVTLLGQNVDAYGRDMVPRQRFADLLHYV-ADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIKA 106
            ++VTLLGQN+DAYGRDMVP++ FA LL ++ A++P   R+R+VTSHPRY S RV++AVA L  + ECF VPFQ+GD+EVLR MRRGYT ++YMRII++I+A
Sbjct:    1 KEVTLLGQNIDAYGRDMVPKRTFAQLLEFLNANIPKKMRLRYVTSHPRYFSDRVIDAVANLDKVCECFHVPFQAGDDEVLRQMRRGYTFDSYMRIIDKIRA 101

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KNX7_9PHAE	1.110e-48	83.84	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S2V0W1_9STRA	1.000e-47	78.79	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A835YXD9_9STRA	8.970e-43	74.75	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S1KEP4_9ALVE	3.760e-42	67.68	Hypothetical protein (Fragment) n=1 Tax=Vitrella b...	[more]
A0A7S4DL29_HETAK	4.400e-41	71.72	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S2AZH5_9STRA	2.240e-40	66.67	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
A0A7R9VDU1_9STRA	7.590e-40	69.31	Hypothetical protein (Fragment) n=1 Tax=Pseudictyo...	[more]
A0A0G4ERE5_VITBC	1.400e-39	67.68	Uncharacterized protein n=1 Tax=Vitrella brassicaf...	[more]
A0A7S1FRF9_9STRA	2.040e-39	66.67	Hypothetical protein (Fragment) n=1 Tax=Corethron ...	[more]
A0A7S3DWS7_9STRA	1.340e-37	63.37	Hypothetical protein (Fragment) n=1 Tax=Amphiprora...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007197	Radical SAM	PFAM	PF04055	Radical_SAM	coord: 6..106 e-value: 1.5E-7 score: 32.0
IPR023404	Radical SAM, alpha/beta horseshoe	GENE3D	3.80.30.20		coord: 1..107 e-value: 4.1E-29 score: 103.7
None	No IPR available	PANTHER	PTHR43020:SF1	TRNA-2-METHYLTHIO-N(6)-DIMETHYLALLYLADENOSINE SYNTHASE	coord: 6..106
None	No IPR available	PANTHER	PTHR43020	FAMILY NOT NAMED	coord: 6..106
None	No IPR available	SUPERFAMILY	102114	Radical SAM enzymes	coord: 7..106

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig33184	contig	H-paniculata_contig33184:163..1220 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig33184.8901.1	mRNA_H-paniculata_contig33184.8901.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig33184 163..1220 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig33184.8901.1 ID=prot_H-paniculata_contig33184.8901.1|Name=mRNA_H-paniculata_contig33184.8901.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp
LCTSVKRKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTS
HPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRI
INRIKAV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007197	rSAM
IPR023404	rSAM_horseshoe