mRNA_H-paniculata_contig33184.8901.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A6H5KNX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX7_9PHAE) HSP 1 Score: 174 bits (440), Expect = 1.110e-48 Identity = 83/99 (83.84%), Postives = 92/99 (92.93%), Query Frame = 1
Query: 19 RKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIK 315
R+VTLLGQNVDAYGRDM PR FADLLHYV+DVPGIER+RFVTSHPRYMSL VV+AVA LP+MAECFMVPFQSGDNEVL+NMRRGYT+ YMRII+RI+
Sbjct: 481 REVTLLGQNVDAYGRDMNPRNSFADLLHYVSDVPGIERVRFVTSHPRYMSLDVVDAVANLPSMAECFMVPFQSGDNEVLKNMRRGYTITRYMRIIDRIR 579
BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A7S2V0W1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0W1_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.000e-47 Identity = 78/99 (78.79%), Postives = 90/99 (90.91%), Query Frame = 1
Query: 19 RKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIK 315
R++TLLGQN+DAYGRDM P+Q FADLLHYV+DVPGIERIRFVTSHPRYMSL+VV+AVA LP M E F VPFQSGD++VL+NM RGYTV+ YM+IINRIK
Sbjct: 105 REITLLGQNIDAYGRDMQPKQTFADLLHYVSDVPGIERIRFVTSHPRYMSLKVVDAVASLPTMCENFYVPFQSGDDQVLKNMGRGYTVDRYMQIINRIK 203
BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A835YXD9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXD9_9STRA) HSP 1 Score: 155 bits (391), Expect = 8.970e-43 Identity = 74/99 (74.75%), Postives = 87/99 (87.88%), Query Frame = 1
Query: 19 RKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIK 315
R++TLLGQN+DAYGRDM P+Q FADLLHY+ DV GIERIR+VTSHPRYMS RVV+AVA L + EC+ VPFQSGD+EVLR MRRGYT ++YMRII+RIK
Sbjct: 255 REITLLGQNIDAYGRDMSPKQTFADLLHYLNDVEGIERIRYVTSHPRYMSERVVDAVANLDKVCECYHVPFQSGDDEVLRRMRRGYTHDSYMRIIDRIK 353
BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A7S1KEP4_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1KEP4_9ALVE) HSP 1 Score: 148 bits (374), Expect = 3.760e-42 Identity = 67/99 (67.68%), Postives = 89/99 (89.90%), Query Frame = 1
Query: 19 RKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIK 315
++VTLLGQN+D++GRDM P+++F+DLLH+VAD PG+ERIRFVTSHPRY+S RVV+AVA+ P++ E F +PFQ+GDNEVLRNMRRGYT E Y+ +I+RI+
Sbjct: 57 KEVTLLGQNIDSWGRDMHPKRKFSDLLHHVADTPGVERIRFVTSHPRYISERVVDAVAEHPSLMEYFHIPFQAGDNEVLRNMRRGYTRERYLHVIDRIR 155
BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A7S4DL29_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL29_HETAK) HSP 1 Score: 151 bits (381), Expect = 4.400e-41 Identity = 71/99 (71.72%), Postives = 86/99 (86.87%), Query Frame = 1
Query: 19 RKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIK 315
R++TLLGQN+DAYGRDM P+Q FADLLHYVA VPGI R+R+VTSHPRYMS RVV+AVA LP + ECF VP QSG ++VL+ MRRGYTVE Y++I++RIK
Sbjct: 295 REITLLGQNIDAYGRDMAPKQSFADLLHYVAAVPGIARVRYVTSHPRYMSERVVDAVAALPGVMECFYVPPQSGSDKVLKLMRRGYTVEKYLKIVDRIK 393
BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A7S2AZH5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZH5_9STRA) HSP 1 Score: 144 bits (364), Expect = 2.240e-40 Identity = 70/105 (66.67%), Postives = 86/105 (81.90%), Query Frame = 1
Query: 1 LCTSVKRKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIK 315
L S +++TLLGQN+DA+GRDM P+Q+F+DLL +VADVPGIER+RFVTSHPRYMS RVV+AVA P + E F VPFQSGDN VL MRRGYT E Y++I+ RI+
Sbjct: 94 LAKSGYKEITLLGQNIDAWGRDMSPKQKFSDLLLHVADVPGIERVRFVTSHPRYMSDRVVDAVASEPKLCEVFHVPFQSGDNTVLARMRRGYTRERYLQIVKRIR 198
BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A7R9VDU1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VDU1_9STRA) HSP 1 Score: 141 bits (356), Expect = 7.590e-40 Identity = 70/101 (69.31%), Postives = 86/101 (85.15%), Query Frame = 1
Query: 19 RKVTLLGQNVDAYGRDMVPRQRFADLLHYVAD--VPG-IERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRI 312
++VTLLGQN+DAYGRDMVPR+ FADLLHY+ D PG IER+R+VTSHPRY S RV++AVA L + ECF +PFQSGDN VL++MRRGYT E+YMRII++I
Sbjct: 150 KEVTLLGQNIDAYGRDMVPRRTFADLLHYLNDNLPPGTIERVRYVTSHPRYFSDRVIDAVANLDKVCECFHMPFQSGDNGVLKDMRRGYTFESYMRIISKI 250
BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A0G4ERE5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERE5_VITBC) HSP 1 Score: 148 bits (374), Expect = 1.400e-39 Identity = 67/99 (67.68%), Postives = 89/99 (89.90%), Query Frame = 1
Query: 19 RKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIK 315
++VTLLGQN+D++GRDM P+++F+DLLH+VAD PG+ERIRFVTSHPRY+S RVV+AVA+ P++ E F +PFQ+GDNEVLRNMRRGYT E Y+ +I+RI+
Sbjct: 383 KEVTLLGQNIDSWGRDMHPKRKFSDLLHHVADTPGVERIRFVTSHPRYISERVVDAVAEHPSLMEYFHIPFQAGDNEVLRNMRRGYTRERYLHVIDRIR 481
BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A7S1FRF9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRF9_9STRA) HSP 1 Score: 141 bits (355), Expect = 2.040e-39 Identity = 66/99 (66.67%), Postives = 83/99 (83.84%), Query Frame = 1
Query: 19 RKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIK 315
++VTLLGQN+DAYGRDM P+ FADLL+ +V GIER+R+VTSHPRY S RV++AVA L + ECF VPFQ+GD+EVLR MRRGYT ++YM+IIN+IK
Sbjct: 35 KEVTLLGQNIDAYGRDMSPKTTFADLLYAANNVQGIERVRYVTSHPRYFSDRVIDAVANLDKVCECFHVPFQAGDDEVLRRMRRGYTFDSYMKIINKIK 133
BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Match: A0A7S3DWS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DWS7_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.340e-37 Identity = 64/101 (63.37%), Postives = 85/101 (84.16%), Query Frame = 1
Query: 19 RKVTLLGQNVDAYGRDMVPRQRFADLLHYV-ADVPGIERIRFVTSHPRYMSLRVVEAVAKLPAMAECFMVPFQSGDNEVLRNMRRGYTVETYMRIINRIKA 318
++VTLLGQN+DAYGRDMVP++ FA LL ++ A++P R+R+VTSHPRY S RV++AVA L + ECF VPFQ+GD+EVLR MRRGYT ++YMRII++I+A
Sbjct: 1 KEVTLLGQNIDAYGRDMVPKRTFAQLLEFLNANIPKKMRLRYVTSHPRYFSDRVIDAVANLDKVCECFHVPFQAGDDEVLRQMRRGYTFDSYMRIIDKIRA 101 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33184.8901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig33184.8901.1 >prot_H-paniculata_contig33184.8901.1 ID=prot_H-paniculata_contig33184.8901.1|Name=mRNA_H-paniculata_contig33184.8901.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp LCTSVKRKVTLLGQNVDAYGRDMVPRQRFADLLHYVADVPGIERIRFVTSback to top mRNA from alignment at H-paniculata_contig33184:163..1220- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig33184.8901.1 ID=mRNA_H-paniculata_contig33184.8901.1|Name=mRNA_H-paniculata_contig33184.8901.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1058bp|location=Sequence derived from alignment at H-paniculata_contig33184:163..1220- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig33184:163..1220- >mRNA_H-paniculata_contig33184.8901.1 ID=mRNA_H-paniculata_contig33184.8901.1|Name=mRNA_H-paniculata_contig33184.8901.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=642bp|location=Sequence derived from alignment at H-paniculata_contig33184:163..1220- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |