prot_H-paniculata_contig33046.8871.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig33046.8871.1
Unique Nameprot_H-paniculata_contig33046.8871.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length43
Homology
BLAST of mRNA_H-paniculata_contig33046.8871.1 vs. uniprot
Match: D7G354_ECTSI (COP9 signalosome complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G354_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.730e-16
Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 MQDVTDWALQMRYRTTAARILDAHRKFLDASVRFYELSHAQVR 43
            MQ+VTDWALQMRYRTTAARILDAHRKFLDASVRFYELS AQ +
Sbjct:  175 MQEVTDWALQMRYRTTAARILDAHRKFLDASVRFYELSLAQSK 217          
BLAST of mRNA_H-paniculata_contig33046.8871.1 vs. uniprot
Match: A0A835ZDX9_9STRA (COP9 signalosome complex subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDX9_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.160e-9
Identity = 26/41 (63.41%), Postives = 36/41 (87.80%), Query Frame = 0
Query:    1 MQDVTDWALQMRYRTTAARILDAHRKFLDASVRFYELSHAQ 41
            M +V +W LQ+RYRT +AR+LDA+RKFLDA++R+YELS A+
Sbjct:  163 MAEVQNWQLQLRYRTVSARVLDANRKFLDAAMRYYELSQAR 203          
BLAST of mRNA_H-paniculata_contig33046.8871.1 vs. uniprot
Match: A0A7S0SZ10_9STRA (COP9 signalosome complex subunit 4 (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZ10_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.940e-8
Identity = 25/38 (65.79%), Postives = 34/38 (89.47%), Query Frame = 0
Query:    1 MQDVTDWALQMRYRTTAARILDAHRKFLDASVRFYELS 38
            M D+TD  LQ+RYR T+AR+LDA+RKFL+AS+R+Y+LS
Sbjct:   65 MNDITDRHLQLRYRVTSARVLDANRKFLEASLRYYDLS 102          
BLAST of mRNA_H-paniculata_contig33046.8871.1 vs. uniprot
Match: F0Y2X5_AURAN (COP9 signalosome complex subunit 4 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2X5_AURAN)

HSP 1 Score: 56.6 bits (135), Expect = 3.610e-8
Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    7 WALQMRYRTTAARILDAHRKFLDASVRFYELSHAQ 41
            WALQ+RYR T AR LDA RKFLDAS+R+YELS A+
Sbjct:  158 WALQLRYRVTLARTLDARRKFLDASMRYYELSQAR 192          
BLAST of mRNA_H-paniculata_contig33046.8871.1 vs. uniprot
Match: A0A8J2SNR5_9STRA (COP9 signalosome complex subunit 4 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SNR5_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 6.790e-8
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    1 MQDVT---DWALQMRYRTTAARILDAHRKFLDASVRFYELSHA 40
            M+DV+   +WAL +RYR T AR LDA RKFLDAS+R+YELS A
Sbjct:  167 MRDVSASENWALHLRYRVTLARTLDARRKFLDASMRYYELSRA 209          
BLAST of mRNA_H-paniculata_contig33046.8871.1 vs. uniprot
Match: A0A7S1U060_9STRA (COP9 signalosome complex subunit 4 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U060_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.730e-7
Identity = 24/38 (63.16%), Postives = 34/38 (89.47%), Query Frame = 0
Query:    1 MQDVTDWALQMRYRTTAARILDAHRKFLDASVRFYELS 38
            M DV+D +L++RYRTT AR+LDA+RKFLDA+ R+Y++S
Sbjct:  127 MADVSDRSLELRYRTTYARVLDANRKFLDAATRYYDVS 164          
BLAST of mRNA_H-paniculata_contig33046.8871.1 vs. uniprot
Match: W7TQ54_9STRA (Cop9 signalosome complex subunit 4 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQ54_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 2.790e-7
Identity = 24/43 (55.81%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    1 MQDVTDWALQMRYRTTAARILDAHRKFLDASVRFYELSHAQVR 43
            M+ VTD+ +Q+RYR T A++LDA+RKFL+A++R++ELS  Q R
Sbjct:  201 MEAVTDYWVQLRYRVTYAKVLDANRKFLEAALRYHELSQTQRR 243          
BLAST of mRNA_H-paniculata_contig33046.8871.1 vs. uniprot
Match: A0A6V1T605_HETAK (COP9 signalosome complex subunit 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T605_HETAK)

HSP 1 Score: 53.9 bits (128), Expect = 3.250e-7
Identity = 23/33 (69.70%), Postives = 31/33 (93.94%), Query Frame = 0
Query:    6 DWALQMRYRTTAARILDAHRKFLDASVRFYELS 38
            DW+LQ+RYR T AR+LDA+RKFL+A+VR++ELS
Sbjct:  175 DWSLQLRYRVTYARVLDANRKFLEAAVRYHELS 207          
BLAST of mRNA_H-paniculata_contig33046.8871.1 vs. uniprot
Match: A0A4D9CTT1_9STRA (COP9 signalosome complex subunit 4 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTT1_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 3.260e-7
Identity = 24/43 (55.81%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    1 MQDVTDWALQMRYRTTAARILDAHRKFLDASVRFYELSHAQVR 43
            M+ VTD+ +Q+RYR T A++LDA+RKFL+A++R++ELS  Q R
Sbjct:  201 MEAVTDYWVQLRYRVTYAKVLDANRKFLEAALRYHELSQTQRR 243          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33046.8871.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G354_ECTSI1.730e-1690.70COP9 signalosome complex subunit 4 n=1 Tax=Ectocar... [more]
A0A835ZDX9_9STRA2.160e-963.41COP9 signalosome complex subunit 4 n=1 Tax=Tribone... [more]
A0A7S0SZ10_9STRA2.940e-865.79COP9 signalosome complex subunit 4 (Fragment) n=2 ... [more]
F0Y2X5_AURAN3.610e-874.29COP9 signalosome complex subunit 4 (Fragment) n=1 ... [more]
A0A8J2SNR5_9STRA6.790e-865.12COP9 signalosome complex subunit 4 n=1 Tax=Pelagom... [more]
A0A7S1U060_9STRA1.730e-763.16COP9 signalosome complex subunit 4 n=1 Tax=Phaeomo... [more]
W7TQ54_9STRA2.790e-755.81Cop9 signalosome complex subunit 4 (Fragment) n=1 ... [more]
A0A6V1T605_HETAK3.250e-769.70COP9 signalosome complex subunit 4 n=1 Tax=Heteros... [more]
A0A4D9CTT1_9STRA3.260e-755.81COP9 signalosome complex subunit 4 n=1 Tax=Nannoch... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig33046contigH-paniculata_contig33046:2270..2398 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig33046.8871.1mRNA_H-paniculata_contig33046.8871.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig33046 2270..2410 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig33046.8871.1 ID=prot_H-paniculata_contig33046.8871.1|Name=mRNA_H-paniculata_contig33046.8871.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=43bp
MQDVTDWALQMRYRTTAARILDAHRKFLDASVRFYELSHAQVR
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