prot_H-paniculata_contig3298.8841.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3298.8841.1
Unique Nameprot_H-paniculata_contig3298.8841.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length98
Homology
BLAST of mRNA_H-paniculata_contig3298.8841.1 vs. uniprot
Match: A0A438JTI8_VITVI (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JTI8_VITVI)

HSP 1 Score: 164 bits (415), Expect = 8.360e-51
Identity = 75/92 (81.52%), Postives = 80/92 (86.96%), Query Frame = 0
Query:    6 LYIPTQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQATCPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 97
            L  P QAITIEAE+REDGSR+TTRYDIDMTKCIYCGFCQ  CPVDAIVEGPN+EF TETHEELLYDKEKLL NGDRWE  IA+NL A+  YR
Sbjct:   16 LICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFTTETHEELLYDKEKLLENGDRWETEIAENLRAESLYR 107          
BLAST of mRNA_H-paniculata_contig3298.8841.1 vs. uniprot
Match: UPI000C1CD8A2 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial isoform X2 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CD8A2)

HSP 1 Score: 166 bits (420), Expect = 1.940e-50
Identity = 75/97 (77.32%), Postives = 83/97 (85.57%), Query Frame = 0
Query:    1 YDKSYLYIPTQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQATCPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 97
            ++K     P QAITIEAE+REDGSR+TTRYDIDMTKCIYCGFCQ  CPVDAIVEGPN+EFATETHEELLYDKEKLL NGDRWE  IA+NL ++  YR
Sbjct:   94 FEKKVTICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 190          
BLAST of mRNA_H-paniculata_contig3298.8841.1 vs. uniprot
Match: UPI000B79355C (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial-like n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B79355C)

HSP 1 Score: 163 bits (412), Expect = 3.600e-50
Identity = 74/93 (79.57%), Postives = 81/93 (87.10%), Query Frame = 0
Query:    5 YLYIPTQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQATCPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 97
            +   P QAITIEAE+REDGSR+TTRYDIDMTKCIYCGFCQ  CPVDAIVEGPN+EFATETHEELLYDKEKLL NGDRWE  IA+NL ++  YR
Sbjct:   28 FQICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLDNGDRWETEIAENLRSESLYR 120          
BLAST of mRNA_H-paniculata_contig3298.8841.1 vs. uniprot
Match: A0A1R3KDN5_COCAP (4Fe-4S ferredoxin-type domain-containing protein n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3KDN5_COCAP)

HSP 1 Score: 160 bits (406), Expect = 2.030e-49
Identity = 73/89 (82.02%), Postives = 79/89 (88.76%), Query Frame = 0
Query:    9 PTQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQATCPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 97
            P QAITIEAE+REDGSR+TTRYDIDMTKCIYCG CQ  CPVDAIVEGPN+EFATETHEELLYDKEKLL NGDRWE  IA+NL ++  YR
Sbjct:   20 PAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 108          
BLAST of mRNA_H-paniculata_contig3298.8841.1 vs. uniprot
Match: A0A371HJF1_MUCPR (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B, mitochondrial (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371HJF1_MUCPR)

HSP 1 Score: 164 bits (416), Expect = 3.460e-49
Identity = 75/92 (81.52%), Postives = 81/92 (88.04%), Query Frame = 0
Query:    6 LYIPTQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQATCPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 97
            L  P QAITIEAE+REDGSR+TTRYDIDMTKCIYCGFCQ  CPVDAIVEGPN+EFATETHEELLYDKEKLL NGDRWE  IA+NL ++  YR
Sbjct:  149 LICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 240          
BLAST of mRNA_H-paniculata_contig3298.8841.1 vs. uniprot
Match: A0A075AEY3_9TREM (4Fe-4S ferredoxin-type domain-containing protein n=2 Tax=Eumetazoa TaxID=6072 RepID=A0A075AEY3_9TREM)

HSP 1 Score: 160 bits (406), Expect = 5.040e-49
Identity = 73/89 (82.02%), Postives = 80/89 (89.89%), Query Frame = 0
Query:    9 PTQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQATCPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 97
            P QAITIEAE R DGSR+TTRYDIDMTKCIYCGFCQ  CPVDAIVEGPN+E++TETHEELLY+KEKLL NGDRWEV IA+NL AD+ YR
Sbjct:   49 PAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEYSTETHEELLYNKEKLLQNGDRWEVEIAENLKADYLYR 137          
BLAST of mRNA_H-paniculata_contig3298.8841.1 vs. uniprot
Match: A0A565ASL5_9BRAS (4Fe-4S ferredoxin-type domain-containing protein n=11 Tax=Brassicaceae TaxID=3700 RepID=A0A565ASL5_9BRAS)

HSP 1 Score: 164 bits (415), Expect = 5.990e-49
Identity = 75/96 (78.12%), Postives = 82/96 (85.42%), Query Frame = 0
Query:    2 DKSYLYIPTQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQATCPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 97
            D  +   P QAITIEAE+REDGSR+TTRYDIDMTKCIYCGFCQ  CPVDAIVEGPN+EFATETHEELLYDKEKLL NGDRWE  IA+NL ++  YR
Sbjct:  152 DAYHQVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 247          
BLAST of mRNA_H-paniculata_contig3298.8841.1 vs. uniprot
Match: A0A4S8IBF3_MUSBA (4Fe-4S ferredoxin-type domain-containing protein n=3 Tax=Musa TaxID=4640 RepID=A0A4S8IBF3_MUSBA)

HSP 1 Score: 163 bits (412), Expect = 1.850e-48
Identity = 74/89 (83.15%), Postives = 80/89 (89.89%), Query Frame = 0
Query:    9 PTQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQATCPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 97
            P QAITIEAE+REDGSR+TTRYDIDMTKCIYCGFCQ  CPVDAIVEGPN+EFATETHEELLYDKEKLL NGDRWE  IA+NL ++  YR
Sbjct:  162 PAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 250          
BLAST of mRNA_H-paniculata_contig3298.8841.1 vs. uniprot
Match: UPI000E6D6658 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like n=1 Tax=Hyposmocoma kahamanoa TaxID=1477025 RepID=UPI000E6D6658)

HSP 1 Score: 157 bits (398), Expect = 1.880e-48
Identity = 71/87 (81.61%), Postives = 78/87 (89.66%), Query Frame = 0
Query:   11 QAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQATCPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 97
            QAITIEAE+R DGSR+TTRYDIDMTKCIYCGFCQ  CPVDAIVEGPN+EF+TETHEELLY+KEKLL NGD+WE  IA N+ ADH YR
Sbjct:    3 QAITIEAEERHDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLLNGDKWESEIAANIRADHLYR 89          
BLAST of mRNA_H-paniculata_contig3298.8841.1 vs. uniprot
Match: A0A1B6QHS2_SORBI (4Fe-4S ferredoxin-type domain-containing protein n=19 Tax=Poaceae TaxID=4479 RepID=A0A1B6QHS2_SORBI)

HSP 1 Score: 163 bits (412), Expect = 1.910e-48
Identity = 74/89 (83.15%), Postives = 80/89 (89.89%), Query Frame = 0
Query:    9 PTQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQATCPVDAIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 97
            P QAITIEAE+REDGSR+TTRYDIDMTKCIYCGFCQ  CPVDAIVEGPN+EFATETHEELLYDKEKLL NGDRWE  IA+NL ++  YR
Sbjct:  163 PAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 251          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3298.8841.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A438JTI8_VITVI8.360e-5181.52NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
UPI000C1CD8A21.940e-5077.32NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
UPI000B79355C3.600e-5079.57NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A1R3KDN5_COCAP2.030e-4982.024Fe-4S ferredoxin-type domain-containing protein n... [more]
A0A371HJF1_MUCPR3.460e-4981.52NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A075AEY3_9TREM5.040e-4982.024Fe-4S ferredoxin-type domain-containing protein n... [more]
A0A565ASL5_9BRAS5.990e-4978.134Fe-4S ferredoxin-type domain-containing protein n... [more]
A0A4S8IBF3_MUSBA1.850e-4883.154Fe-4S ferredoxin-type domain-containing protein n... [more]
UPI000E6D66581.880e-4881.61NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A1B6QHS2_SORBI1.910e-4883.154Fe-4S ferredoxin-type domain-containing protein n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.3270coord: 8..96
e-value: 2.0E-22
score: 81.5
NoneNo IPR availablePANTHERPTHR10849:SF20NADH DEHYDROGENASE (UBIQUINONE) FE-S PROTEIN 8, (NADH-COENZYME Q REDUCTASE)-RELATEDcoord: 9..97
NoneNo IPR availableSUPERFAMILY548624Fe-4S ferredoxinscoord: 9..81
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPFAMPF12838Fer4_7coord: 9..51
e-value: 4.9E-8
score: 33.4
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 28..57
score: 10.474
IPR010226NADH-quinone oxidoreductase, chain IPANTHERPTHR10849NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIALcoord: 9..97
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 37..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3298contigH-paniculata_contig3298:17227..18222 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3298.8841.1mRNA_H-paniculata_contig3298.8841.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3298 17227..18222 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3298.8841.1 ID=prot_H-paniculata_contig3298.8841.1|Name=mRNA_H-paniculata_contig3298.8841.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=98bp
YDKSYLYIPTQAITIEAEQREDGSRKTTRYDIDMTKCIYCGFCQATCPVD
AIVEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0178964Fe4S_Fe-S-bd
IPR010226NADH_quinone_OxRdtase_chainI
IPR0179004Fe4S_Fe_S_CS