prot_H-paniculata_contig32967.8838.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig32967.8838.1
Unique Nameprot_H-paniculata_contig32967.8838.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length226
Homology
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BLAST of mRNA_H-paniculata_contig32967.8838.1 vs. uniprot
Match: D7FU50_ECTSI (CBF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU50_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 1.880e-39
Identity = 137/256 (53.52%), Postives = 167/256 (65.23%), Query Frame = 0 
Query:    1 MQFVELEPSLCVSTAPKVVQSA-----IVRGAGGGXXAGEGTVWGGLFFEVMRALALGPCSMQPKVLKALGEDYVNVHDDVRYYLLGNITAMAKRAFSDSDKRDSKTAISAGVDTPKKPSP--LPADSPLRGFPGVDAAF---------------------GNIQERGDVSTVTPDARQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ETMTLENIGGRLAQLLMVVRMVEEQSDLTAFLVPVELSLPA 226
            MQFVE+EP LCVS A K+ ++      ++ G GG    G GT+WGGLF E+MR + LGPCSM+PK+LK+LGED+VNVHDD+RY+LL ++T++A+ A +D  K   + A S    +   PS   LP +SPLRGF G  AAF                     G  +     S V       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   + M L  I GRLA++LMVVRMVEEQSDLTAFL+PV LSLP+
Sbjct:  164 MQFVEIEPILCVSAA-KLSRAGRRGGGLLGGDGGLASPGAGTIWGGLFAELMRTIVLGPCSMEPKLLKSLGEDFVNVHDDIRYFLLASVTSIARHALADDTKLQEQRA-SPSPSSXXXPSRFVLPENSPLRGFRGTAAAFADARGGAGGGGETVGSAGKGSGGCETAAGASAVDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGQKMDLAEISGRLARVLMVVRMVEEQSDLTAFLLPVRLSLPS 417
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32967.8838.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FU50_ECTSI1.880e-3953.52CBF domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig32967contigH-paniculata_contig32967:15..1670 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig32967.8838.1mRNA_H-paniculata_contig32967.8838.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig32967 15..1694 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig32967.8838.1 ID=prot_H-paniculata_contig32967.8838.1|Name=mRNA_H-paniculata_contig32967.8838.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=226bp
MQFVELEPSLCVSTAPKVVQSAIVRGAGGGGGAGEGTVWGGLFFEVMRAL
ALGPCSMQPKVLKALGEDYVNVHDDVRYYLLGNITAMAKRAFSDSDKRDS
KTAISAGVDTPKKPSPLPADSPLRGFPGVDAAFGNIQERGDVSTVTPDAR
QEQEADAASNSKKKRKNKKKNKNMDAAGFGDGGGGETMTLENIGGRLAQL
LMVVRMVEEQSDLTAFLVPVELSLPA
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