prot_H-paniculata_contig32948.8833.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig32948.8833.1
Unique Name	prot_H-paniculata_contig32948.8833.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	126

Homology

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BLAST of mRNA_H-paniculata_contig32948.8833.1 vs. uniprot
Match: D7FN93_ECTSI (Type-4 uracil-DNA glycosylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN93_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 2.280e-53
Identity = 87/123 (70.73%), Postives = 102/123 (82.93%), Query Frame = 0

Query:    4 DVNLHQAFVQDLLAMRGDPLEEHGGRVVVYRGNPQARLMMVGEAPGAEEDMQGLPFVGRSGQLLDDILRAVGLDPEEDAYVTNIVRRRPPNNRPPTSEELDFYLPALLEEIRLVNPDIIVTLG 126
            D   H+AFV+ LL + GDPLEE GGRVVV+RG+P A LM++GEAPGAEED  G+PFVGRSGQLLDD+LRAVG DPE + YV+NIVRRRP +NR PT EE+DFYLP LLEEI LV+P +IV LG
Sbjct:  135 DAEGHRAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLG 257

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BLAST of mRNA_H-paniculata_contig32948.8833.1 vs. uniprot
Match: A0A835YMS9_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMS9_9STRA)

HSP 1 Score: 166 bits (419), Expect = 7.630e-49
Identity = 82/119 (68.91%), Postives = 93/119 (78.15%), Query Frame = 0

Query:    8 HQAFVQDLLAMRGDPLEEHGGRVVVYRGNPQARLMMVGEAPGAEEDMQGLPFVGRSGQLLDDILRAVGLDPEEDAYVTNIVRRRPPNNRPPTSEELDFYLPALLEEIRLVNPDIIVTLG 126
            H      LLA+ GDPLE  GGR+VVYRG+PQA+LM+VGEAPGA ED  G PFVGRSGQLLD IL+A G DPE D YV+NIVRRRPP NR PT+ E+ +Y P LLEEIRLVNP II+T G
Sbjct:   60 HAEMTAALLALTGDPLEPAGGRIVVYRGDPQAKLMVVGEAPGAMEDETGKPFVGRSGQLLDAILKAAGFDPETDLYVSNIVRRRPPENRDPTTAEIAYYRPWLLEEIRLVNPAIIITTG 178

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BLAST of mRNA_H-paniculata_contig32948.8833.1 vs. uniprot
Match: A0A3M1EZS2_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1EZS2_9CHLR)

HSP 1 Score: 160 bits (405), Expect = 2.680e-47
Identity = 77/119 (64.71%), Postives = 91/119 (76.47%), Query Frame = 0

Query:    8 HQAFVQDLLAMRGDPLEEHGGRVVVYRGNPQARLMMVGEAPGAEEDMQGLPFVGRSGQLLDDILRAVGLDPEEDAYVTNIVRRRPPNNRPPTSEELDFYLPALLEEIRLVNPDIIVTLG 126
            HQA V+ L  + GDPLE  GG +V+YRGNP A+LM++GE PGAEED    PFVGRSGQLLD ILRAV  DPE D Y+TN+V+RRPP NR PT EE++FY P L EEIRLV+P II+  G
Sbjct:   30 HQALVEALENLTGDPLEPWGGNMVIYRGNPAAKLMVIGEGPGAEEDRLRKPFVGRSGQLLDKILRAVHFDPETDVYITNVVKRRPPENRDPTPEEINFYAPYLFEEIRLVDPKIIMLTG 148

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BLAST of mRNA_H-paniculata_contig32948.8833.1 vs. uniprot
Match: A0A7C3BN30_9CHLR (Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7C3BN30_9CHLR)

HSP 1 Score: 149 bits (376), Expect = 3.680e-43
Identity = 69/119 (57.98%), Postives = 89/119 (74.79%), Query Frame = 0

Query:    8 HQAFVQDLLAMRGDPLEEHGGRVVVYRGNPQARLMMVGEAPGAEEDMQGLPFVGRSGQLLDDILRAVGLDPEEDAYVTNIVRRRPPNNRPPTSEELDFYLPALLEEIRLVNPDIIVTLG 126
            HQ  V+ L  + GDPLE+ GG +V+YRGNP A+LM++GE PGA ED    PFVGRSG+LLD IL AV  +PE+D Y++N+VRRRPP NR P  +E+ FY P L EEIRL++P II+ +G
Sbjct:   11 HQELVEALNNLGGDPLEQWGGNIVIYRGNPAAKLMIIGEGPGANEDRLRKPFVGRSGKLLDQILSAVNFNPEQDVYISNVVRRRPPKNRDPLPKEIAFYAPYLFEEIRLLDPKIILLIG 129

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BLAST of mRNA_H-paniculata_contig32948.8833.1 vs. uniprot
Match: A0A7S3A2Z9_9RHOD (Type-4 uracil-DNA glycosylase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A2Z9_9RHOD)

HSP 1 Score: 150 bits (378), Expect = 4.100e-43
Identity = 70/109 (64.22%), Postives = 89/109 (81.65%), Query Frame = 0

Query:   18 MRGDPLEEHGGRVVVYRGNPQARLMMVGEAPGAEEDMQGLPFVGRSGQLLDDILRAVGLDPEEDAYVTNIVRRRPPNNRPPTSEELDFYLPALLEEIRLVNPDIIVTLG 126
            +R DPL   GGR+V YRGNP+A+LM+VGE PG +ED++G PFVGRSG+LLD ILR+V LDPEED YVTN V+RRP +NR PT +E+++YLP L EE+RLV+P +IV  G
Sbjct:   46 IRDDPLASDGGRIVHYRGNPRAKLMVVGEGPGEQEDIEGKPFVGRSGKLLDKILRSVELDPEEDVYVTNTVKRRPKDNRDPTRDEIEWYLPYLSEEVRLVDPHVIVCSG 154

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BLAST of mRNA_H-paniculata_contig32948.8833.1 vs. uniprot
Match: A0A1W9W486_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineaceae bacterium 4572_78 TaxID=1972460 RepID=A0A1W9W486_9CHLR)

HSP 1 Score: 146 bits (369), Expect = 5.180e-42
Identity = 72/119 (60.50%), Postives = 88/119 (73.95%), Query Frame = 0

Query:    8 HQAFVQDLLAMRGDPLEEHGGRVVVYRGNPQARLMMVGEAPGAEEDMQGLPFVGRSGQLLDDILRAVGLDPEEDAYVTNIVRRRPPNNRPPTSEELDFYLPALLEEIRLVNPDIIVTLG 126
            HQA V+ L  +  DPLE  G  +V+YRG P+A LM++GEAPGAEED  G PFVGRSGQLLD IL+AV  + E D Y+TN ++RRPPNNR P  EEL++Y P L EEIRLV+P II+  G
Sbjct:   15 HQALVETLKNLTDDPLESTGSNMVIYRGYPKADLMIIGEAPGAEEDKIGKPFVGRSGQLLDKILQAVHFNIETDIYITNTLKRRPPNNRNPKQEELEYYFPFLAEEIRLVDPKIILLAG 133

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BLAST of mRNA_H-paniculata_contig32948.8833.1 vs. uniprot
Match: A0A7S2SWN2_9CHLO (Type-4 uracil-DNA glycosylase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A7S2SWN2_9CHLO)

HSP 1 Score: 149 bits (375), Expect = 7.790e-42
Identity = 69/119 (57.98%), Postives = 94/119 (78.99%), Query Frame = 0

Query:    8 HQAFVQDLLAMRGDPLEEHGGRVVVYRGNPQARLMMVGEAPGAEEDMQGLPFVGRSGQLLDDILRAVGLDPEEDAYVTNIVRRRPPNNRPPTSEELDFYLPALLEEIRLVNPDIIVTLG 126
            H A ++ + +++GDPLE  G R+V YRGNP+A++M++GEAPGAEED QG PFVG+SGQLLD+IL +VG + E+D Y+TNIV+RRPPNNR P   E+  Y P + EEIRL++P II+ +G
Sbjct:  108 HDALMESMKSLKGDPLETTGSRIVTYRGNPEAKIMVIGEAPGAEEDRQGKPFVGKSGQLLDNILGSVGFE-EDDVYITNIVKRRPPNNRTPLKWEILAYKPWIAEEIRLIDPYIIMLVG 225

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BLAST of mRNA_H-paniculata_contig32948.8833.1 vs. uniprot
Match: A0A7S2S1J0_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1J0_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.710e-41
Identity = 71/112 (63.39%), Postives = 87/112 (77.68%), Query Frame = 0

Query:   15 LLAMRGDPLEEHGGRVVVYRGNPQARLMMVGEAPGAEEDMQGLPFVGRSGQLLDDILRAVGLDPEEDAYVTNIVRRRPPNNRPPTSEELDFYLPALLEEIRLVNPDIIVTLG 126
            L  + GDPLEE GGRVV YRGNP A++++VGEAPGA ED  G+P+VGR+G+LLD IL A G D EED Y TN+V+RRPP NR PT+ EL +Y P LLEE+RLV+P I+V  G
Sbjct:   35 LAGLSGDPLEEFGGRVVHYRGNPGAKVVVVGEAPGATEDELGVPYVGRAGKLLDQILTAAGFDVEEDVYFTNVVKRRPPENRDPTAAELRYYSPLLLEELRLVDPWIVVCTG 146

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BLAST of mRNA_H-paniculata_contig32948.8833.1 vs. uniprot
Match: A0A7S3CC74_9CHLO (Type-4 uracil-DNA glycosylase n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CC74_9CHLO)

HSP 1 Score: 145 bits (367), Expect = 2.760e-41
Identity = 70/124 (56.45%), Postives = 93/124 (75.00%), Query Frame = 0

Query:    3 VDVNLHQAFVQDLLAMRGDPLEEHGGRVVVYRGNPQARLMMVGEAPGAEEDMQGLPFVGRSGQLLDDILRAVGLDPEEDAYVTNIVRRRPPNNRPPTSEELDFYLPALLEEIRLVNPDIIVTLG 126
            V    H A ++ + A++GDPLE  G +VV YRG+P A++M++GEAPGAEED QG PFVG+SGQLLD+IL +VG   E+D Y+TNIV+RRPPNNR P   E+  Y P + EEIRL++P II+ +G
Sbjct:   41 VSFGSHGALIEGMKALKGDPLETTGSKVVTYRGSPNAKIMVIGEAPGAEEDRQGKPFVGKSGQLLDNILGSVGFV-EDDVYITNIVKRRPPNNRTPLKWEILAYKPWIAEEIRLIDPSIIMLVG 163

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BLAST of mRNA_H-paniculata_contig32948.8833.1 vs. uniprot
Match: A0A7S2V4W6_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4W6_9STRA)

HSP 1 Score: 145 bits (366), Expect = 4.600e-41
Identity = 73/121 (60.33%), Postives = 91/121 (75.21%), Query Frame = 0

Query:    8 HQAFVQDLLAMRGDPLEEHGGRVVVYRGNPQARLMMVGEAPGAEEDMQGLPFVGRSGQLLDDILRAVGLD--PEEDAYVTNIVRRRPPNNRPPTSEELDFYLPALLEEIRLVNPDIIVTLG 126
            +  F Q   +M GDPL+  GG VVV+RGNP+ R+M+VGEAPG EED Q LPFVG++GQLL+ +L   G D  P+ + Y+TN+V+RRPPNNR PT EE+ FYLP L EEIRLV+PDIIV  G
Sbjct:   61 YDEFFQVTQSMEGDPLDG-GGSVVVFRGNPRGRVMVVGEAPGEEEDKQKLPFVGKAGQLLEKMLTEAGFDTGPQGEVYITNLVKRRPPNNRNPTPEEVSFYLPLLQEEIRLVDPDIIVCAG 180

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig32948.8833.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig32948.8833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FN93_ECTSI	2.280e-53	70.73	Type-4 uracil-DNA glycosylase n=1 Tax=Ectocarpus s...	[more]
A0A835YMS9_9STRA	7.630e-49	68.91	Type-4 uracil-DNA glycosylase n=1 Tax=Tribonema mi...	[more]
A0A3M1EZS2_9CHLR	2.680e-47	64.71	Type-4 uracil-DNA glycosylase n=1 Tax=Caldilineae ...	[more]
A0A7C3BN30_9CHLR	3.680e-43	57.98	Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi ...	[more]
A0A7S3A2Z9_9RHOD	4.100e-43	64.22	Type-4 uracil-DNA glycosylase n=1 Tax=Rhodosorus m...	[more]
A0A1W9W486_9CHLR	5.180e-42	60.50	Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineac...	[more]
A0A7S2SWN2_9CHLO	7.790e-42	57.98	Type-4 uracil-DNA glycosylase n=2 Tax=Chloropicon ...	[more]
A0A7S2S1J0_9STRA	1.710e-41	63.39	Type-4 uracil-DNA glycosylase n=1 Tax=Rhizochromul...	[more]
A0A7S3CC74_9CHLO	2.760e-41	56.45	Type-4 uracil-DNA glycosylase n=1 Tax=Chloropicon ...	[more]
A0A7S2V4W6_9STRA	4.600e-41	60.33	Type-4 uracil-DNA glycosylase n=1 Tax=Fibrocapsa j...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00987	UDG_2_a	coord: 32..126 e-value: 1.0E-10 score: 51.6
None	No IPR available	PANTHER	PTHR33693	FAMILY NOT NAMED	coord: 22..126
None	No IPR available	PANTHER	PTHR33693:SF7		coord: 22..126
IPR005122	Uracil-DNA glycosylase-like	SMART	SM00986	UDG_2	coord: 32..126 e-value: 1.0E-10 score: 51.6
IPR005122	Uracil-DNA glycosylase-like	PFAM	PF03167	UDG	coord: 33..126 e-value: 3.1E-28 score: 98.7
IPR036895	Uracil-DNA glycosylase-like domain superfamily	GENE3D	3.40.470.10		coord: 4..126 e-value: 1.2E-39 score: 137.6
IPR036895	Uracil-DNA glycosylase-like domain superfamily	SUPERFAMILY	52141	Uracil-DNA glycosylase-like	coord: 10..126

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig32948	contig	H-paniculata_contig32948:1232..2309 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig32948.8833.1	mRNA_H-paniculata_contig32948.8833.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig32948 1232..2309 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig32948.8833.1 ID=prot_H-paniculata_contig32948.8833.1|Name=mRNA_H-paniculata_contig32948.8833.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp
MMVDVNLHQAFVQDLLAMRGDPLEEHGGRVVVYRGNPQARLMMVGEAPGA
EEDMQGLPFVGRSGQLLDDILRAVGLDPEEDAYVTNIVRRRPPNNRPPTS
EELDFYLPALLEEIRLVNPDIIVTLG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005122	Uracil-DNA_glycosylase-like
IPR036895	Uracil-DNA_glycosylase-like_sf