prot_H-paniculata_contig32941.8832.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig32941.8832.1
Unique Nameprot_H-paniculata_contig32941.8832.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length126
Homology
BLAST of mRNA_H-paniculata_contig32941.8832.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 1.560e-70
Identity = 115/124 (92.74%), Postives = 118/124 (95.16%), Query Frame = 0
Query:    1 MSGKGKGGRGDGKKSMTRSTKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHTVLLPKKVVKK 124
            MSGKGKGGRG  KKS TRS KAGLQFPVGR+GRFLK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIH VLLPKK VKK
Sbjct:    1 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122          
BLAST of mRNA_H-paniculata_contig32941.8832.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 5.340e-69
Identity = 114/123 (92.68%), Postives = 117/123 (95.12%), Query Frame = 0
Query:    1 MSGKGKGGRGDGKKSMTRSTKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHTVLLPKKVVK 123
            MSGKGKGGRG  KKS TRS KAGLQFPVGR+GRFLK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIH VLLPKK VK
Sbjct:   46 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166          
BLAST of mRNA_H-paniculata_contig32941.8832.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 8.950e-66
Identity = 108/120 (90.00%), Postives = 115/120 (95.83%), Query Frame = 0
Query:    1 MSGKGKGGRGDGKKSMTRSTKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHTVLLPKK 120
            MSGKGKGGRG  KKS ++S+KAGLQFPV RIGR+LK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIH VLLPKK
Sbjct:    1 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118          
BLAST of mRNA_H-paniculata_contig32941.8832.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 4.570e-65
Identity = 108/120 (90.00%), Postives = 115/120 (95.83%), Query Frame = 0
Query:    1 MSGKGKGGRGDGKKSMTRSTKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHTVLLPKK 120
            MSGKGKGGRG  KKS ++S+KAGLQFPV RIGR+LK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIH VLLPKK
Sbjct:   52 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 169          
BLAST of mRNA_H-paniculata_contig32941.8832.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 8.820e-65
Identity = 106/120 (88.33%), Postives = 112/120 (93.33%), Query Frame = 0
Query:    1 MSGKGKGGRGDGKKSMTRSTKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHTVLLPKK 120
            MSGKGKGGRG  KK  +RS KAGLQFPVGRIGRF+KQGKY+SRVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIH VLLPKK
Sbjct:    1 MSGKGKGGRG--KKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118          
BLAST of mRNA_H-paniculata_contig32941.8832.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 199 bits (505), Expect = 7.990e-64
Identity = 106/123 (86.18%), Postives = 113/123 (91.87%), Query Frame = 0
Query:    1 MSGKGKGGRGDGKKSMTRSTKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHTVLLPKKVVK 123
            MSGKGKGGRG GKKS T S KAGLQFPVGRIGR+L+QGKYA+R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIH VLLPKK  K
Sbjct:    1 MSGKGKGGRG-GKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122          
BLAST of mRNA_H-paniculata_contig32941.8832.1 vs. uniprot
Match: A0A061QUG5_9CHLO (Histone H2A n=4 Tax=core chlorophytes TaxID=2692248 RepID=A0A061QUG5_9CHLO)

HSP 1 Score: 198 bits (504), Expect = 1.670e-63
Identity = 103/124 (83.06%), Postives = 115/124 (92.74%), Query Frame = 0
Query:    1 MSGKGKGGRGDGKKSMTRSTKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHTVLLPKKVVKK 124
            MSG+GKG    GKK+++RS KAGLQFPVGR+ R+LK+GKYA+R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG+VTIASGGVLPNIH+VLLPKK  KK
Sbjct:    1 MSGRGKGKSAAGKKAVSRSAKAGLQFPVGRVARYLKKGKYATRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIASGGVLPNIHSVLLPKKSDKK 124          
BLAST of mRNA_H-paniculata_contig32941.8832.1 vs. uniprot
Match: A0A835ZBB6_9STRA (Histone H2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB6_9STRA)

HSP 1 Score: 197 bits (502), Expect = 3.160e-63
Identity = 104/126 (82.54%), Postives = 114/126 (90.48%), Query Frame = 0
Query:    1 MSGKGKGGRG-DGKKSMTRSTKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHTVLLPKKVVKKA 125
            M+GKGKGGRG +GKK  ++S KAGLQFPV R+GR+LKQG+YA RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELN+LLG VTIASGGVLPNIH VLLPKK   KA
Sbjct:    1 MAGKGKGGRGAEGKKITSQSAKAGLQFPVARMGRYLKQGRYADRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNRLLGNVTIASGGVLPNIHAVLLPKKTAAKA 126          
BLAST of mRNA_H-paniculata_contig32941.8832.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 197 bits (502), Expect = 4.100e-63
Identity = 101/123 (82.11%), Postives = 115/123 (93.50%), Query Frame = 0
Query:    3 GKGKGGRGDGKKSMTRSTKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHTVLLPKKVVKKA 125
            GKGKGGRGD KK++++S KAGLQFPVGR+GRFLKQG+YA RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RI+PRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIH VLLPKK   K+
Sbjct:    5 GKGKGGRGD-KKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSKS 126          
BLAST of mRNA_H-paniculata_contig32941.8832.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 197 bits (500), Expect = 4.620e-63
Identity = 103/120 (85.83%), Postives = 112/120 (93.33%), Query Frame = 0
Query:    1 MSGKGKGGRGDGKKSMTRSTKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHTVLLPKK 120
            MSGKGKGGRG+ KKS T S KAGLQFPVGRIGR+L+QGKYA+R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIH +LLPKK
Sbjct:    1 MSGKGKGGRGE-KKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKK 119          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32941.8832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI1.560e-7092.74Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI5.340e-6992.68Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE8.950e-6690.00Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI4.570e-6590.00Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LLP0_ECTSI8.820e-6588.33Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A6U2JFS4_9STRA7.990e-6486.18Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A061QUG5_9CHLO1.670e-6383.06Histone H2A n=4 Tax=core chlorophytes TaxID=269224... [more]
A0A835ZBB6_9STRA3.160e-6382.54Histone H2A n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A835ZLE9_9STRA4.100e-6382.11Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A448ZH28_9STRA4.620e-6385.83Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 43..58
score: 90.36
coord: 58..71
score: 90.54
coord: 72..86
score: 74.98
coord: 100..118
score: 73.63
coord: 14..36
score: 67.33
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..123
e-value: 5.0E-79
score: 278.5
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..125
e-value: 6.3E-62
score: 209.2
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 5..124
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 12..89
e-value: 7.8E-16
score: 58.6
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 92..125
e-value: 1.8E-18
score: 65.9
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 8..125
NoneNo IPR availablePANTHERPTHR23430:SF251coord: 8..125
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 22..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig32941contigH-paniculata_contig32941:1643..2020 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig32941.8832.1mRNA_H-paniculata_contig32941.8832.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig32941 1643..2020 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig32941.8832.1 ID=prot_H-paniculata_contig32941.8832.1|Name=mRNA_H-paniculata_contig32941.8832.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp
MSGKGKGGRGDGKKSMTRSTKAGLQFPVGRIGRFLKQGKYASRVGAGAPV
YLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGE
VTIASGGVLPNIHTVLLPKKVVKKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR032454Histone_H2A_C
IPR032458Histone_H2A_CS