mRNA_H-paniculata_contig3275.8790.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3275.8790.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO) HSP 1 Score: 343 bits (879), Expect = 2.620e-104 Identity = 216/667 (32.38%), Postives = 348/667 (52.17%), Query Frame = 1
Query: 1 MKRLRSDQRGEYTGKPFRQFCAENSIKQEFSAAYTPQQNGVAERSWRSWRSIFGMARANMITANMGHRCWAEAVRSVVYCLNRAPTRPYNGGTPYEKWLGETPKLDYLRVFGCTAY--VMFQQRRNLDDKAWAGVFLGYEEDSPSYRIFNPENKSVR-----VTNTENRTSASQMRPILPTYSLPAASANPFSVLSDDDXXXESYGYSTIKDVKPASKTHPAPMSQGNTMKQLGTEVQHPRDRSPIRTRARARENRKEGPGTTTRVVKVEGTGNFREAVSKEKPTFAAEALKDPRRLPAGRKAIRTEWILKRKLKEDGSVARYKARLVAQGFSQVEGEDFFEASAPEVRMSTLHTVFSLVTEHDFELEGMDVDAAYLNAPVEEELFVKLPPMFSPSYRDVRFVRRLRKSLYSLKQSGRNWSNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETDLLVAVYGDDLVIADYREK-VDECKDNISQRFRMKYYGSLSHVLGIEVRRNRPNDTITISEGSYTREVLKICGFNECRGVSTPVEGIVKILAPESSDKPSEPNGASTEYRGMVGSLMYSSTGTRPDLAYAVHLAARCMEDPCREDFSACKRIFRYPTTVPDLGITFGGKRNRHGLKGFVNADWAEDVEDRKSTRGYVVKLNAGAISWCSRKQQLV 1977
+K LR+D GEYT F+ F + I+ E + TP+QNGVAER ++ + R+ + A + + WAEA+ + VY NR+PT+ G TP+E W GE PK+D+LR+FGCT Y V +R+ LD KA + LGY ++ YR+++ + V + N N A + P+ A + + D S + V+ + + P G + P+ T V+ ++EA+ KE + A + + LP GRKA+ ++W+ K K+ DG+ R+KARLVAQGFSQ G D+ E +P VR ++ T+ + ++ +L MDV A+LN ++EE++++ P F ++ V +L +S+Y LKQS R W+ LD+ L +G ++T D C+Y + GE ++AVY DD+++A +K + E K +++ F +K G L+H LG+++ + I + + +Y VLK G + VSTPV+ K++ + +P +++ VGSL+Y ST TRPD+AYAV+ AR P ++ ++A KRI RY +LG+ + + + + GF +ADWA D DRKS GY+ +++ A+SW S+KQ V
Sbjct: 10 LKVLRTDNGGEYTSSEFQDFLKKEGIRHELTVPKTPEQNGVAERMNKT---LMETVRSMLADAKLPQKFWAEALSTAVYLRNRSPTKSVKGMTPFEAWTGEKPKVDHLRIFGCTVYAHVPKDERKKLDPKAKKCILLGYGTETKGYRLYDSKLAKVFFSRDVIFNESNH--AFEKEPV-------ANEDGAVNRYVEFDCQEPDNEESPEQKVQRSERLRKPPDYYGEWVTVASNPTTEPK--------------------TVKDVLSSPDKAKWKEAMEKEMESLYANNVWNLVELPKGRKAVGSKWVFKVKVDADGTFERHKARLVAQGFSQKFGSDYDETFSPVVRFESVRTIIAQAVQYGLKLHQMDVKTAFLNGELKEEVYMQQPEGFVVKGKE-HLVCKLNRSIYGLKQSPRCWNIVLDEQLKKMGFVQTTGDPCIYTAAT--GEM-FIIAVYVDDILLAGCSDKRMMEVKKMLAKHFEIKDMGELTHFLGVKIIQKPETGEIWMGQATYAENVLKKFGMENSKPVSTPVDINTKLVKHSDDSEVMDPK----QFQSAVGSLLYLSTRTRPDIAYAVNNVARFCAKPTKQHWTAVKRIMRYLKGTLNLGLLYNKDKPKECI-GFSDADWAGDQNDRKSMSGYMFQISGAAVSWRSKKQTCV 635
BLAST of mRNA_H-paniculata_contig3275.8790.1 vs. uniprot
Match: UPI001F004464 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F004464) HSP 1 Score: 343 bits (881), Expect = 2.410e-102 Identity = 219/671 (32.64%), Postives = 362/671 (53.95%), Query Frame = 1
Query: 1 MKRLRSDQRGEYTGKPFRQFCAENSIKQEFSAAYTPQQNGVAERSWRSWRSIFGMARANMITANMGHRCWAEAVRSVVYCLNRAPTRPYNGGTPYEKWLGETPKLDYLRVFGCTAY--VMFQQRRNLDDKAWAGVFLGYEEDSPSYRIFNPENKSVRVTNTE--------NRTSASQMRPILPTYSLPAASANPFSVLSDDDXXXESYGYSTIKDVKPASKTHPAPMSQGNTMKQLGTEVQHPRDRSPIRTRARARENRKEGPGTTTRVVKVEGTGNFREAVSKEKPTFAAEALKDPRRLPAGRKAIRTEWILKRKLKEDGSVARYKARLVAQGFSQVEGEDFFEASAPEVRMSTLHTVFSLVTEHDFELEGMDVDAAYLNAPVEEELFVKLPPMFSPSYRDVRFVRRLRKSLYSLKQSGRNWSNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETDLLVAVYGDDLVIADYREK-VDECKDNISQRFRMKYYGSLSHVLGIEVRRNRPNDTITISEGSYTREVLKICGFNECRGVSTPVEGIVKILAPESSDKPSEPNGASTEYRGMVGSLMYSSTGTRPDLAYAVHLAARCMEDPCREDFSACKRIFRYPTTVPDLGITFGGKRNRHGLKGFVNADWAEDVEDRKSTRGYVVKLNAGAISWCSRKQQLVT 1980
+K +RSD+ GE+T + F+ FC ++ I++ + +PQQNGVAER R+ I MAR+ + + N+ WAEAV VY LNR+PTR G TP E W G P + +LRVFG AY V + R LDDK+ A +F+GY+ +S Y+++NP+ ++ ++ + +S I+PT +A V + S + ++D P S + + + ++ + + + + + + A P T V+ + +R+A+ +E + + LP G KAI +W+ K K G + RYKARLVA+G+SQ G D+ E AP R+ T+ + SL ++ +++ MDV +A+LN ++EE++++ P + ++ + V RL+K+LY LKQ+ R W++ +D +L G + + LY DG L+V +Y DDL+ A ++ +DE K ++++ F M G +++ LGIEV+ + D I IS+ Y +E++K ++C V+TPVE +K+ + +K +T ++ +VGSL Y T TRPD+ YA L +R ME+P +RI RY + G+ F N + L G+ ++DWA D++DRKST G+V + A +W S+KQ +VT
Sbjct: 238 IKAMRSDRGGEFTSREFQNFCEKHGIRRPLTVPRSPQQNGVAERKNRT---ILDMARSMLKSKNLPKEFWAEAVACAVYLLNRSPTRSVWGKTPQESWSGRKPGISHLRVFGSKAYAHVPDETRSKLDDKSKAFIFIGYDSNSKGYKLYNPDTNNLVISRDVEFDEEGEWDFSSHEDFNSIMPTEEEEQPTAEQ-DVQQEPTTPLTSP--TVVQDASPPSFLNERSVERARSLGDIYEDTERLENLTLLCLFADCE------PVTFEEAVQSK---KWRDAMDEEIKSIEKNDTWELTSLPKGHKAIGVKWVYKAKKNSKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGVLDEEVYIQQPMGYKVKMQEDK-VLRLKKALYGLKQAPRAWNSRIDKYLQENGFAKCPHEHALYTKMKDGDI--LIVCLYVDDLIFAGNNQRMIDEFKQSMAKVFEMTDIGLMAYYLGIEVK--QLEDGIFISQEGYAKEIIKKFKMDDCNPVNTPVECGIKLSKHDEDEKVD-----TTMFKSLVGSLRYL-TCTRPDILYATGLISRYMENPTTTHLKTARRILRYLKGTINFGL-FYSTSNDYKLVGYSDSDWAGDIDDRKSTTGFVFFMGDTAFTWMSKKQPIVT 881
BLAST of mRNA_H-paniculata_contig3275.8790.1 vs. uniprot
Match: A0A151R6U8_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R6U8_CAJCA) HSP 1 Score: 347 bits (890), Expect = 6.570e-102 Identity = 223/683 (32.65%), Postives = 346/683 (50.66%), Query Frame = 1
Query: 1 MKRLRSDQRGEYTGKPFRQFCAENSIKQEFSAAYTPQQNGVAERSWRSWRSIFGMARANMITANMGHRCWAEAVRSVVYCLNRAPTRPYNGGTPYEKWLGETPKLDYLRVFGCTAYVMF--QQRRNLDDKAWAGVFLGYEEDSPSYRIFNPENKSVRVTNTENRTSASQMRPILPTYSLPAASANPFSVLSDDDXXXESYGYSTIKDVKPASKTHPAPMSQGNTMKQLGTEVQHPRDRSPIRTRARARENRK--------------------EG-PGTTTRVVKVEGTGNFREAVSKEKPTFAAEALKDPRRLPAGRKAIRTEWILKRKLKEDGSVARYKARLVAQGFSQVEGEDFFEASAPEVRMSTLHTVFSLVTEHDFELEGMDVDAAYLNAPVEEELFVKLPPMFSPSYRDVRFVRRLRKSLYSLKQSGRNWSNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETDLLVAVYGDDLVIADYREKVDECKDNISQRFRMKYYGSLSHVLGIEVRRNRPNDTITISEGSYTREVLKICGFNECRGVSTPVEGIVKILAPESSDKPSEPNGAS-TEYRGMVGSLMYSSTGTRPDLAYAVHLAARCMEDPCREDFSACKRIFRYPTTVPDLGITFGGKRNRHGLKGFVNADWAEDVEDRKSTRGYVVKLNAGAISWCSRKQQLV 1977
+K LR+D GEY F FC + IK++F+ A+TPQQNGVAER R+ + RA + TA + WAEAV++ Y +NR+P+ TP E W G+ L VFGC YVM+ Q+R LD K+ +FLGY ++ YR+++P + V V+ V ++ + E STIKD + + +Q E Q P + + R R+ +K EG P T ++ + A+ +E + LP GRKAI +W+ K K + V RY+ARLV +G++Q EG DF E +P VR++T+ V ++ + LE +DV A+L+ ++EE+++ P F ++ V RL KSLY LKQ+ R W D F++ +G NR ++D C Y++R D + +L+ D LV+ ++++ E K +++ F MK G + +LG+++ R+R N I +S+ +Y +VL+ +C+ +STP+ K+ + S +E S Y VGSLMY+ TRPD+A AV +R M DP RE +S KRI RY D+ + F G + ++G+V++D+A D++ RKST GYV L GA+SW S+ Q +V
Sbjct: 494 IKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRT---LLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDV--------------------------VFAETELQKEQENDSTIKDTSIVEIGGKSKEDDTSEAEQEHDE-QEPNEDNDGDVRRTTRQTKKPSWHSDYVMASHDAYCLLTEEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAAFNLHLEQLDVKTAFLHGELQEEIYMLQPEGFKEQGKE-NLVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCTYYNRFDDNDFIILLLYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKILGMQIHRDRKNRRIWLSQKNYLLKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEG--SEFFVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVV 1143
BLAST of mRNA_H-paniculata_contig3275.8790.1 vs. uniprot
Match: A0A4Y1RBF6_PRUDU (ADP glucose pyrophosphorylase large subunit 1 n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RBF6_PRUDU) HSP 1 Score: 337 bits (863), Expect = 3.060e-100 Identity = 227/692 (32.80%), Postives = 352/692 (50.87%), Query Frame = 1
Query: 1 MKRLRSDQRGEYTGKPFRQFCAENSIKQEFSAAYTPQQNGVAERSWRSWRSIFGMARANMITANMGHRCWAEAVRSVVYCLNRAPTRPYNGGTPYEKWLGETPKLDYLRVFGCTAYVMF--QQRRNLDDKAWAGVFLGYEEDSPSYRIFNPENKSVRVTN------------TENRTSASQMRPILPTYSLPAASANPFSVLSDDDXXXESYGYSTIKDVKPASKTHPAPMSQGNTMKQLGTEVQHPRDRSPIRTRARAR-----------ENRK------EGPGTTTRVVKVEGTGNFREAVSKEKPTFAAEALKDPRRLPAGRKAIRTEWILKRKLKEDGSVARYKARLVAQGFSQVEGEDFFEASAPEVRMSTLHTVFSLVTEHDFELEGMDVDAAYLNAPVEEELFVKLPPMFSPSYRDVRFVRRLRKSLYSLKQSGRNWSNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETDLLVAVYGDDLVIADYREKV-DECKDNISQRFRMKYYGSLSHVLGIEVRRNRPNDTITISEGSYTREVLKICGFNECRGVSTPVEGIVKILAPESSDKPSEPNGASTEYRGMVGSLMYSSTGTRPDLAYAVHLAARCMEDPCREDFSACKRIFRYPTTVPDLGITFGGKRNRHGLKGFVNADWAEDVEDRKSTRGYVVKLNAGAISWCSRKQQLVT 1980
+K LR+D+ GEY K F FC E IK++ + AYTPQQNGV+ER R+ I M R+ ++ + + W EAV V+ LNR+PT TP E W G P +D+ RVFGC AY ++R+ LDDK+ VFLG E S +Y+++NP K + V+ +ENR+ Q +P Y DD E P ++ P + + +Q E + RD + + A EN P T T VK E +REA+ E + + LP G++ I +W+ + KL E G V ++KARLVA+G+ Q G D+ E AP R T+ V SL ++ +++ +DV +A+L+ ++EE+++ PP + ++ + V +L+K+LY LKQ+ R W + +D +G ++ + LY ++ G+ L+V +Y DDL+ K+ DE K ++ F M G + + LG+EV + + I + Y +++L ++C+ TP E +K+ + + ST Y+ ++GSLMY T TRPD+ YAV L +R ME P +A KRI RY D G+ F + + G G+ ++D+A D++DRKST G+ LN+GAISW S+KQQ+VT
Sbjct: 150 IKTLRTDRGGEYCSKEFDAFCKEKGIKRQLTTAYTPQQNGVSERKNRT---ILNMVRSLLVKGRIPKKFWPEAVLWSVHILNRSPTFSVKNMTPQEAWSGLKPAVDHFRVFGCIAYAHIPDEKRKKLDDKSEKCVFLGVSEVSKAYKLYNPVTKKIVVSRDVIFDEDTMWNWSENRSVQQQ----IPVY---------------DDLDNEEVA-------APETQAQQPPQLEVQSSQQFEEERYNLRDENSRKRPAWMMDYDVSYSSSDDENAHFALLVDSDPITYTEAVKEE---KWREAMDNEIKSIEKNQTWELTDLPKGKQTIGVKWVFRTKLNEKGEVDKHKARLVAKGYKQKHGIDYKEVFAPVARHDTIRLVISLAAQNSWQIFQLDVKSAFLHGNLQEEVYIDQPPGYERKGKEEK-VFKLKKALYGLKQAPRAWYSRIDAHFAKLGFHKCPFEHTLYVKTEEEGKI-LMVCLYVDDLIFTGSDAKMFDEFKKSMMMEFEMTDLGLMHYFLGLEVIQTTAGNFIY--QKKYAQDILNRFQMDDCKPFGTPAEHGLKLCKDKGGKEVD-----STFYKQIIGSLMYL-TYTRPDIMYAVSLVSRYMEKPTEMHLNAAKRILRYVKGTIDYGV-FYKREDGSGFVGYTDSDYAGDIDDRKSTSGHTFLLNSGAISWSSKKQQIVT 798
BLAST of mRNA_H-paniculata_contig3275.8790.1 vs. uniprot
Match: A0A2M4CK12_ANODA (Putative pol polyprotein (Fragment) n=1 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CK12_ANODA) HSP 1 Score: 332 bits (850), Expect = 2.240e-99 Identity = 211/667 (31.63%), Postives = 343/667 (51.42%), Query Frame = 1
Query: 4 KRLRSDQRGEYTGKPFRQFCAENSIKQEFSAAYTPQQNGVAERSWRSWRSIFGMARANMITANMGHRCWAEAVRSVVYCLNRAPTRPYNGGTPYEKWLGETPKLDYLRVFGCTAYVMFQQ--RRNLDDKAWAGVFLGYEEDSPSYRIFNPENKSVRVTNT----ENRTSASQMRPILPTYSLPAASANPFSVLSDDDXXXESYGYSTIKD--VKPASKTHPAPMSQGNTMKQLGTEVQHPRDRSPIRTRARARENRKEGPGTTTRVVKVEGTGNFREAVSKEKPTFAAEALKDPRRLPAGRKAIRTEWILKRKLKEDGSVARYKARLVAQGFSQVEGEDFFEASAPEVRMSTLHTVFSLVTEHDFELEGMDVDAAYLNAPVEEELFVKLPPMFSPSYRDVRFVRRLRKSLYSLKQSGRNWSNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETDLLVAVYGDDLV-IADYREKVDECKDNISQRFRMKYYGSLSHVLGIEVRRNRPNDTITISEGSYTREVLKICGFNECRGVSTPVEGIVKILAPESSDKPSEPNGASTEYRGMVGSLMYSSTGTRPDLAYAVHLAARCMEDPCREDFSACKRIFRYPTTVPDLGITFGGKRNRHGLKGFVNADWAEDVEDRKSTRGYVVKLNAGAISWCSRKQQLV 1977
K +RSDQ GEY+ K + F IK +++A+Y+PQQNGVAER RS + M R + A + + WAEA+ + VY N +PT+P N TPYE W G PK+++LR+FGC A+ + R+ L A FLGY D +YR+ + + ++ E + + + T S P ++ D T + V+PA + +S+ ++ + + + P R A +++ E P T + ++ + +R A+ +E + RLP GRKA+ +W KRK E+G + RYKARLVAQG+SQ G+D+ E AP +R +T T+ +L ++ + ++ +D+ AYL+A ++E++++K PP F+ V L+KSLY LKQS R W+ +D L + ++ D CLY +G + +L+ Y DD+V + + +E+ +E + + Q F++ G + H LGI V N D + + SY +++ G + + P++ + E S+ P+ YR +VGSL+Y S TRPD+ +V L R +E+P D++ KR+ RY + G K + FV+ADWA D DRKS G+++K + + W +RKQ V
Sbjct: 100 KAIRSDQGGEYSSKNLQDFYKREGIKPQYTASYSPQQNGVAERKNRS---LIEMVRCMLFDAQLEQKYWAEAMNTAVYLQNISPTKPRNN-TPYETWHGVKPKVNHLRIFGCDAWAHIPKAKRKKLGATAQKLTFLGYSYDHKAYRLLDKTTNEIHISRDVKFIEKAPCSERAKHDRETRH---QSKKPQEIIIDTTLKENPITIETQAEPEVQPAFEETREIVSEIDSDTEPRRSTRPTKGIPPDRLMANVIKHQIEQPHTYSEAIESTESTAWRAAMQEEINALQGNDTWELVRLPLGRKAVGCKWTYKRKENENGEIVRYKARLVAQGYSQKFGQDYDEVFAPVIRQATFRTILTLASKQNMIVKHLDIKNAYLHAELQEDIYMKQPPGFTKGN---DLVCHLKKSLYGLKQSARAWNAKIDRVLKEMQFQQAEADQCLYIRTHEGKQDYILI--YVDDIVAVYNTKEEYEELRKRLEQHFKLSCLGDIKHFLGIRVANN--GDRYILDQESYIEKMILRFGHEQAKTSRVPIDPAY-LKQKEESELPTN-----ASYRSLVGSLLYVSVNTRPDICLSVSLLGRKVENPTNRDWTEAKRVLRYLKATKKHRLHLGTKSTT--TECFVDADWAGDEADRKSHSGFLLKFSGALVDWGTRKQSCV 744
BLAST of mRNA_H-paniculata_contig3275.8790.1 vs. uniprot
Match: A0A5S6QN85_TRIMR (Integrase catalytic domain-containing protein n=2 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QN85_TRIMR) HSP 1 Score: 332 bits (851), Expect = 4.520e-99 Identity = 220/664 (33.13%), Postives = 341/664 (51.36%), Query Frame = 1
Query: 10 LRSDQRGEYTGKPFRQFCAENSIKQEFSAAYTPQQNGVAERSWRSWRSIFGMARANMITANMGHRCWAEAVRSVVYCLNRAPTRPYNGGTPYEKWLGETPKLDYLRVFGCTAYVMF--QQRRNLDDKAWAGVFLGYEEDSPSYRIFNPENKSVRVTNTENRTSASQMRPILPTYSLPAASAN---PFSVLSDDDXXXESYGYSTIKDVKPASKTHPAPMSQGNTMKQLGTEVQHPRDRSPIRTRARARENRKEGPGTTTRVVK--VEGTGNFREAVSKEKPTFAAEALKDPRRLPAGRKAIRTEWILKRKLKEDGSVARYKARLVAQGFSQVEGEDFFEASAPEVRMSTLHTVFSLVTEHDFELEGMDVDAAYLNAPVEEELFVKLPPMFSPSYRDVRFVRRLRKSLYSLKQSGRNWSNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETDLLVAVYGDDLVIADYREKVD-ECKDNISQRFRMKYYGSLSHVLGIEVRRNRPNDTITISEGSYTREVLKICGFNECRGVSTPVEGIVKILAPESSDKPSEPNGASTEYRGMVGSLMYSSTGTRPDLAYAVHLAARCMEDPCREDFSACKRIFRYPTTVPDLGITFGGKRNRHGLKGFVNADWAEDVEDRKSTRGYVVKLNAGAISWCSRKQQLV 1977
RSD EY + F E I+ + + YTPQQNGVAER RS + MAR ++ A + R W EA+ + Y NR P+R TPYE + G P + +LRVFG AY + ++RR L A GV +GY + YR+ +P+ V + + + + Q +L P A N +++ D+ ++ + +P+S+ P + + EV + +++ KE P T +++ ++ + EAV+ E + + + LP G++ I +W+ K K + G++ YKARLVA+GFSQ++G D+ E AP VR T+ +F++ + + +DV AYLN ++EELF++ PP FS D + V RLR+SLY LKQS R W+ D L +G + D CL FSR++ T V +Y DDL+IA ++ + ++ F +K G + LG++V R + + + + + R +LK G + + V+TP+E L+ + P P+ A EYR +GSL+Y +T TRPD+++AV RCME P + D+ A KR+ RY P + F + L GFV+ADWA D DRKST GY K+ ++W SRKQ V
Sbjct: 109 FRSDNGREYVTNALKGFFEEQGIEHQLTVPYTPQQNGVAERKNRS---LIEMARCMLLDAGLSKRFWGEAIITAAYLQNRLPSRSVEC-TPYEHFYGSKPAVSHLRVFGSKAYSLIPKERRRKLSQSAMEGVLVGYGNTTKGYRLLDPKTARVWYSRSAHIVESPQQLSVLHERKRPDAPINRPLQHKMVNLDEWGSFKNDWADVP-AEPSSERQELPR-RSERLAAKEAEVTERWSNKDYVWKV-IKDDTKE-PMTWEEMLQLPIKEREKWMEAVNAELMSLEKHKVWEIADLPPGKRTISAKWVFKAKRDDQGNIHTYKARLVARGFSQIQGRDYDETFAPVVRHETVRILFAVAAMKNMHVRHVDVKTAYLNGKLDEELFLEPPPGFSQPTTDGK-VLRLRRSLYGLKQSARVWNQVATDALQKLGFRPNRADPCL-FSRNEKNNTMSYVLLYVDDLLIAGSSPELTCDVGKQLNSYFEIKDLGEVRQYLGMQVEREE-DGSFLLYQAAKVRHLLKEHGLLDAKPVATPMEA--NFLSSTEEESPKLPDNA--EYRKAIGSLLYLATATRPDISFAVGQLCRCMEHPTQRDWKAVKRVMRYLAGSPYRKLRFSANGSIK-LSGFVDADWAGDHADRKSTSGYAFKVGTSTVAWSSRKQSFV 756
BLAST of mRNA_H-paniculata_contig3275.8790.1 vs. uniprot
Match: A0A4Y1R9H3_PRUDU (Transposable element protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R9H3_PRUDU) HSP 1 Score: 337 bits (863), Expect = 3.010e-98 Identity = 219/668 (32.78%), Postives = 354/668 (52.99%), Query Frame = 1
Query: 1 MKRLRSDQRGEYTGKPFRQFCAENSIKQEFSAAYTPQQNGVAERSWRSWRSIFGMARANMITANMGHRCWAEAVRSVVYCLNRAPTRPYNGGTPYEKWLGETPKLDYLRVFGCTAY--VMFQQRRNLDDKAWAGVFLGYEEDSPSYRIFNPENKSVRVTNTENRTSASQMRPILPTYSLPAASANPFSVLSDDDXXXESYGYSTIKDVKPASKTHPAPMSQGNTMKQLGTEVQHPRDRS-----PIRTRARARENR-KEGPGTTTRVVKVEGTGNFREAVSKEKPTFAAEALKDPRRLPAGRKAIRTEWILKRKLKEDGSVARYKARLVAQGFSQVEGEDFFEASAPEVRMSTLHTVFSLVTEHDFELEGMDVDAAYLNAPVEEELFVKLPPMFSPSYRDVRFVRRLRKSLYSLKQSGRNWSNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETDLLVAVYGDDLVIADYREKVDEC-KDNISQRFRMKYYGSLSHVLGIEVRRNRPNDTITISEGSYTREVLKICGFNECRGVSTPVEGIVKILAPESSDKPSEPNGASTEYRGMVGSLMYSSTGTRPDLAYAVHLAARCMEDPCREDFSACKRIFRYPTTVPDLGITFGGKRNRHGLKGFVNADWAEDVEDRKSTRGYVVKLNAGAISWCSRKQQLV 1977
+K LR+D+ GE+T F ++C N IK+E +A YTPQQNGVAER R+ I MAR+ + ++ + WAEA+ + V+ LNR+PT+ TP+E W PK+D+ ++FGCTAY + Q+R D+K +F+GY + S +YR+ +P KS+ ++ + +P P S S++ +S I A + P + N + ++ D + P + +EN ++ RV+K T E V + P + I +W+ K K EDGS+ ++KARLVA+G+SQ G DF E AP VRM T+ TV +L + ++ +DV +A+LN +EEE++V+ P + R+ + V RLRK+LY LKQ+ R W+N +D + G RS ++ LY ++ G L++ +Y DDL+ ++ E K N+ + + M G++ + LGI+V+++ ++ I IS+G Y +LK + + + TP+ +K+ + + + P ++ Y+ +VGSL+Y T TRPD+ +AV + +R M DP F+A KRI RY GI + ++ H L G+ ++DWA ++DRKST G+V L + ISW S+KQ V
Sbjct: 483 LKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRT---IVEMARSMLKAKSLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSLVISRDVIFDELKAWKWENYDIEVPRFFEEPDSSHSEETQFLQS----PIPSAGTADPSSPDSTPRLNARTRSLADIYESCDLALSALEPQKFEEAVKENIWQDAMDEEIRVIKKNRTW---ELVDR----------------PKSKDIIGLKWVYKTKFNEDGSIQKHKARLVAKGYSQQPGIDFNETFAPVVRMETIRTVLALAAQLKTKVYQLDVKSAFLNGELEEEVYVEQPQGYVEKGREDK-VYRLRKALYGLKQAPRAWNNKIDHYFQQNGFTRSLSEPSLYLKKE-GTHDFLILCLYVDDLIYTSTNPRMAEVFKKNMMKEYEMTDLGTMRYFLGIQVQQS--DEGIFISQGKYAENLLKKFNMLKSKPMDTPMAINLKLTSNDGA-----PKFDASIYKSVVGSLIYL-TNTRPDIVHAVSVVSRFMSDPSNHHFAAVKRILRYIQGTKGYGIRYTQEKKAH-LVGYTDSDWAGAIDDRKSTSGHVFFLGSKVISWSSKKQSTV 1113
BLAST of mRNA_H-paniculata_contig3275.8790.1 vs. uniprot
Match: A0A034WM55_BACDO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A034WM55_BACDO) HSP 1 Score: 329 bits (843), Expect = 5.010e-98 Identity = 220/678 (32.45%), Postives = 356/678 (52.51%), Query Frame = 1
Query: 1 MKRLRSDQRGEYTGKPFRQFCAENSIKQEFSAAYTPQQNGVAERSWRSWRSIFGMARANMITANMGHRCWAEAVRSVVYCLNRAPTRPYNGGTPYEKWLGETPKLDYLRVFGCTA--YVMFQQRRNLDDKAWAGVFLGYEEDSPSYRIFNPENKSVRVTNT----ENRTSASQMRPILPTYSLPAASANPFSVLSDDDXXXESYGYSTIK-DVKPASKTHPAPMSQGNTMKQLGTEVQHPRDRSPIRTRARARENRK--------EGPGTTTRVVKVEGTGNFREAVSKEKPTFAAEALKDPRRLPAGRKAIRTEWILKRKLKEDGSVARYKARLVAQGFSQVEGEDFFEASAPEVRMSTLHTVFSLVTEHDFELEGMDVDAAYLNAPVEEELFVKLPPMFSPSYRDVRFVRRLRKSLYSLKQSGRNWSNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETDLLVAVYGDDLVI-ADYREKVDECKDNISQRFRMKYYGSLSHVLGIEVRRNRPNDTITISEGSYTREVLKICGFNECRGVSTPVEGIVKILA---PESSDKPSEPNGASTEYRGMVGSLMYSSTGTRPDLAYAVHLAARCMEDPCREDFSACKRIFRYPTTVPDLGITFGGKRNRHGLKGFVNADWAEDVEDRKSTRGYVVKLNAGAISWCSRKQQLV 1977
+K LR+D EY + F ++ ++ I + + YTP+QNGVAER R+ I R ++ AN+ R WAEA + Y LNR P R N +P E W G+ P L +L+VFGC A +V ++R L K+ + +GY +S +YR+++P K++ V+ EN+ + + T ++ P SV + + E + +S +H + ++ T + H R R R R N P T + E ++ A+ +E + + LP G+KAI ++W+ KRK+ DG RYKARLV +GF+Q + D+ E AP VR +++ + +L +++ + MD +A+L+ ++EE+++ P F V +LRKSLY LKQS R W+ L+ LV GL RS D C+YF D + L VAVY DD+++ A+ + +++ KD +S+ F+MK G+ S VLG+ + +N T+ I + +Y +V++ G EC V TP++ K+ A P + D+ E A+ Y+ +G L++++ TRPD+ +AV+L +R +P + ++A KR+ RY D G+ + KR+ + GF +ADWA DV DR+ST GYV AISW +++Q V
Sbjct: 79 IKVLRTDNGREYINEVFNKYLSKYGIIHQKTTPYTPEQNGVAERLNRT---ITEKIRCMLLDANLEDRFWAEAAVTAAYLLNRTPCRG-NNLSPEELWSGKRPNLKHLKVFGCKAMVHVAKEKRSKLKPKSRECILVGYSTESKAYRLYDPVAKNIIVSCDVVFIENQINKNPPAIDAKTDTVNLWLPEPTSVANSEGEYVEELPTEDGSGETSGSSDSHTVGNHESTMEREEITGLDHEGVRRSERLRNMLRPNYNLCVTEYVSSDPNTVEEAMASEHHKLWQSAMIEEIESHDINGTWELSALPMGKKAIPSKWVFKRKVNADGDPVRYKARLVVKGFNQKQHIDYDETFAPVVRYTSIRFLLALAVKYNLTVYQMDAVSAFLHGELKEEIYMTQPSGFDDGSGR---VCKLRKSLYGLKQSSRVWNIKLNSTLVSFGLQRSNVDQCVYFLVAD--KKMLFVAVYVDDVILFANDTKLLNKLKDKLSETFKMKDLGAASSVLGMRIAQNLKEGTLKIDQSAYIADVIRRFGMEECNPVGTPLDVNQKLSAEMCPTNDDEKREM--AAVPYKQAIGCLLFAAQVTRPDICFAVNLLSRYSTNPGKAHWTAVKRVMRYLKGTIDKGLVY--KRSPDEIVGFCDADWANDVSDRRSTTGYVFSFQNAAISWATKRQHTV 743
BLAST of mRNA_H-paniculata_contig3275.8790.1 vs. uniprot
Match: B8YLY7_LOTJA (Gag-Pol polyprotein n=1 Tax=Lotus japonicus TaxID=34305 RepID=B8YLY7_LOTJA) HSP 1 Score: 337 bits (863), Expect = 6.980e-98 Identity = 220/678 (32.45%), Postives = 341/678 (50.29%), Query Frame = 1
Query: 1 MKRLRSDQRGEYTGKPFRQFCAENSIKQEFSAAYTPQQNGVAERSWRSWRSIFGMARANMITANMGHRCWAEAVRSVVYCLNRAPTRPYNGGTPYEKWLGETPKLDYLRVFGCTAYVMF--QQRRNLDDKAWAGVFLGYEEDSPSYRIFNP--------------ENKSVRVTNTENRTSASQMRPILPTYSLPAASANPFSVLSDDDXXXESYGYSTIKDVKPASKTHPAPMSQGNTMKQLGTEVQHPRDRSPIRTRARARENRKEGPGTTTRVVKVEGTGNFREAVSKEKPTFAAEALKDPRRLPAGRKAIRTEWILKRKLKEDGSVARYKARLVAQGFSQVEGEDFFEASAPEVRMSTLHTVFSLVTEHDFELEGMDVDAAYLNAPVEEELFVKLPPMFSPSYRDVRFVRRLRKSLYSLKQSGRNWSNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETDLLVAVYGDDLVIADYREKVDECKDNISQRFRMKYYGSLSHVLGIEVRRNRPNDTITISEGSYTREVLKICGFNECRGVSTPVEGIVKI---LAPESSDKPSEPNGASTEYRGMVGSLMYSSTGTRPDLAYAVHLAARCMEDPCREDFSACKRIFRYPTTVPDLGITFGGKRNRHGLKGFVNADWAEDVEDRKSTRGYVVKLNAGAISWCSRKQQLV 1977
+K LR+D GEYT F FC + I ++F+ A+TPQQNGVAER R+ + RA + TA + WAEA ++ Y +NR+P+ TP E W G+ LRVFGC YVM+ Q+R LD K+ FLGY ++ YR+++P EN+ + + T + I + A P XXX++ T + ++ S M+ + L + + P T V + A+ +E + LP GRKAI +W+ K K + V RY+ARLV +G++Q EG DF E +P VR++T+ V ++ + LE +DV A+L+ +EEE+++ P F R+ V RL KSLY LKQ+ R W D F++ +G NR ++D C Y+ R D G+ +L+ D LV+ +++V E K +++ F MK G + +LG+++ R+R + I +S+ +Y ++VL+ + +STP+ K+ + P S + E + Y VGSLMY+ TRPD+A AV +R M DP +E ++A KRI RY + FGG + ++G+V++D+A D++ RKST GYV L GA+SW S+ Q +V
Sbjct: 544 IKCLRTDNGGEYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAERMNRT---LLERTRAMLKTAGLAKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGKPGDYSSLRVFGCPVYVMYNSQERTKLDPKSRRCTFLGYADNVKGYRLWDPTARKIFVSRDVIFVENELQKEQKNDGTTKETATVEIEEKSGEENSEAEPXXXXXXXXXXXDAEPRRTTRQIRKPSWHSEYVMASHDAYCLLSEDGE---------------------PSTFHEAVNGSDASLWMAAMQEEIEALHRNNTWELVELPKGRKAIGNKWVFKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRIVLAMCAAFELHLEQLDVKTAFLHGELEEEIYMLQPEGFEEKERE-NLVCRLTKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSSDHCTYYKRFDDGDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLQKVLRRFNMQDYNPISTPLPVNYKLSSSMIPSSEAERMEMSRV--PYASAVGSLMYAMICTRPDIAQAVGTVSRFMADPGKEHWNAVKRILRYIRGTSGAALCFGG--SEFTIRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVV 1192
BLAST of mRNA_H-paniculata_contig3275.8790.1 vs. uniprot
Match: A0A067T5Q4_GALM3 (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067T5Q4_GALM3) HSP 1 Score: 336 bits (861), Expect = 7.440e-98 Identity = 210/670 (31.34%), Postives = 337/670 (50.30%), Query Frame = 1
Query: 4 KRLRSDQRGEYTGKPFRQFCAENSIKQEFSAAYTPQQNGVAERSWRSWRSIFGMARANMITANMGHRCWAEAVRSVVYCLNRAPTRPYNGGTPYEKWLGETPKLDYLRVFGCTAYVMFQ-QRRNLDDKAWAGVFLGYEEDSPSYRIFNPENKSVRVTN----TENRTSASQMRPILPTYSLPAASANPFSVLSDDDXXXESYGYSTIKDVKPASKTHPAPMSQGNTMKQLGTEVQHPRDRSPIRTRARARENRKEGPGTTTRVVKVEGTGNFREAVSKEKPTFAAEALKDPRRLPAGRKAIRTEWILKRKLKEDGSVARYKARLVAQGFSQVEGEDFFEASAPEVRMSTLHTVFSLVTEHDFELEGMDVDAAYLNAPVEEELFVKLPPMFSPSYRDVRFVRRLRKSLYSLKQSGRNWSNTLDDFLVGIGLNRSTTDSCLYFSRDDGGETDLLVAVYGDDLVIADYREKVDECKDNISQRFRMKYYGSLSHVLGIEVRRNRPNDTITISEGSYTREVLKICGFNECRGVSTPVEGIVKILAPESSDKPSEPNGASTE-----YRGMVGSLMYSSTGTRPDLAYAVHLAARCMEDPCREDFSACKRIFRYPTTVPDLGITFGGKRNRHGL--KGFVNADWAEDVEDRKSTRGYVVKLNAGAISWCSRKQQLV 1977
K +R D EY + + +CAE I+ + +A Y+P QNGVAER R+ + MAR+ +I N+ WAEAVR Y NR+PTR NG TP E W G P + +L+ FGC +++ + + L K+ F+G+E+ + R ++ + ++++V+ +E A + ++P L S + S I + A P P ++G + ++ E+ + + A + P + ++ +A+++E + LP RKAI W+ RK E+G + RYKARLVAQGFSQ+ G DF AP +R +L + ++ + E++ +DV AYLN + EE+F++ P F V RL+K+LY LKQSGR W+ LD L + ++S D C+Y R + G T + D ++ D ++++E K + + F + G ++G+EV+R+R TI++ + SY +LK G CR VSTP++ V + +D EP E Y VGSLMY++ GTRPD+AYAV ++ +P ++A KR+FRY D + +GG + + + +AD+A D +DRKS GY + L AI+W S+KQ +
Sbjct: 477 KLVRVDNGTEYINQKTKDWCAEKGIEIQTTAPYSPSQNGVAERFNRT---LMEMARSMLIGRNLPRFLWAEAVRHAAYLRNRSPTRALNGKTPEEAWSGRKPNMSHLQEFGCDVWILNEGSQSKLAPKSTKHTFVGFEDGPKAVRYYDSKTRNIKVSRNYIFSEKEPEAIEFE-LVPRLELEGELKGNSEPQSPEKTPKSPASKSKINNPD-ARLPAPRPRNEGTSQDEIDEEIIANLASNELGFVASLNNANDDLPQSINEAKASPEWEHWEKAINEEYSLLEGMETWELDDLPPERKAIGCRWVFLRKYNENGEIIRYKARLVAQGFSQIPGMDFDGTFAPVMRHDSLRALLAIAAIKNLEIQQLDVKGAYLNGDLREEIFMRQPDGFHDG---TSKVCRLKKTLYGLKQSGREWNRKLDKVLTELRFSKSNVDHCVYI-RTENGHTSYITVWVDDLMIFTDKSDEMNEIKAYLKKEFEISDLGEPKLIIGLEVKRDRKKHTISLGQTSYVDRILKKYGMENCRPVSTPMDPNVVLTRVNENDVKDEPREDRDERLGGRYAAAVGSLMYAAIGTRPDIAYAVQKLSKYSSNPGNSHWTALKRVFRYLAGTRDRVLFYGGDVDEDEVIFSAYCDADFASDSDDRKSISGYTLFLGNAAIAWSSKKQTTI 1137 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3275.8790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3275.8790.1 >prot_H-paniculata_contig3275.8790.1 ID=prot_H-paniculata_contig3275.8790.1|Name=mRNA_H-paniculata_contig3275.8790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=661bp MKRLRSDQRGEYTGKPFRQFCAENSIKQEFSAAYTPQQNGVAERSWRSWRback to top mRNA from alignment at H-paniculata_contig3275:9102..11398+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3275.8790.1 ID=mRNA_H-paniculata_contig3275.8790.1|Name=mRNA_H-paniculata_contig3275.8790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2297bp|location=Sequence derived from alignment at H-paniculata_contig3275:9102..11398+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3275:9102..11398+ >mRNA_H-paniculata_contig3275.8790.1 ID=mRNA_H-paniculata_contig3275.8790.1|Name=mRNA_H-paniculata_contig3275.8790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3966bp|location=Sequence derived from alignment at H-paniculata_contig3275:9102..11398+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |