prot_H-paniculata_contig3263.8770.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3263.8770.1
Unique Nameprot_H-paniculata_contig3263.8770.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length273
Homology
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BLAST of mRNA_H-paniculata_contig3263.8770.1 vs. uniprot
Match: D8LTY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY9_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 4.890e-57
Identity = 126/247 (51.01%), Postives = 149/247 (60.32%), Query Frame = 0 
Query:   35 PRDVESMKKEIAEVQTETTQSLDRAIAAAQAATCVGGDVAEELVQQREQMGQIDAEARDVETTLKRTSHNLKHGFTWRGTLTAPFRRGAPKAPLKGQ---THQDISPVFTDEYTSRTPSKSPTRPKVGRPKSAPSHA-SGDGTGLVGKGGK------DKKEAAGTVTSPGDRSPAMPPSAGHMPEGFDGQLDILDGLLDGLNTQAHAINAELRQQNDGIEVLAGRIEPAAVETSSQAQQIKRRFRVR 271
            PRDV SMK EIAE+Q  TT SLDRAIAAA+A   VG      L +QREQMG+IDAEAR ++ TLKRT HNLK+G TWRG LTAPFRR             T  DISPVF D++   TP           P  AP+H  S   T    KGG+       KK  A      G ++ +  P   ++PEGF+ QLD LD LLDGL  QA  I AEL+QQN+GIEVL  R+EP   ET+ QA+QIKRRF V+
Sbjct:   36 PRDVASMKAEIAELQAGTTASLDRAIAAAEATASVGARTQVTLKEQREQMGEIDAEARAIDGTLKRTGHNLKYGLTWRGALTAPFRRKXXXXXXXXXXXITGGDISPVFKDDFRQSTP-----------PGGAPAHGGSTSSTPSPKKGGRLKFGSPRKKAGAARAEEIGTKAASKLPE--NVPEGFETQLDTLDSLLDGLTVQAKEIGAELKQQNEGIEVLGERVEPLRQETAFQAKQIKRRFGVK 269
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3263.8770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTY9_ECTSI4.890e-5751.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.110coord: 32..109
e-value: 2.1E-12
score: 48.9
NoneNo IPR availablePANTHERPTHR19305SYNAPTOSOMAL ASSOCIATED PROTEINcoord: 33..266
NoneNo IPR availablePANTHERPTHR19305:SF9SYNAPTOSOMAL-ASSOCIATED PROTEIN 29coord: 33..266
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 36..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3263contigH-paniculata_contig3263:14973..17246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3263.8770.1mRNA_H-paniculata_contig3263.8770.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3263 13748..17376 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3263.8770.1 ID=prot_H-paniculata_contig3263.8770.1|Name=mRNA_H-paniculata_contig3263.8770.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=273bp
MTSTWPERRDTEAMPSWAQDPAARRTKKIPSEEGPRDVESMKKEIAEVQT
ETTQSLDRAIAAAQAATCVGGDVAEELVQQREQMGQIDAEARDVETTLKR
TSHNLKHGFTWRGTLTAPFRRGAPKAPLKGQTHQDISPVFTDEYTSRTPS
KSPTRPKVGRPKSAPSHASGDGTGLVGKGGKDKKEAAGTVTSPGDRSPAM
PPSAGHMPEGFDGQLDILDGLLDGLNTQAHAINAELRQQNDGIEVLAGRI
EPAAVETSSQAQQIKRRFRVRG*
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