prot_H-paniculata_contig3250.8744.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3250.8744.1
Unique Nameprot_H-paniculata_contig3250.8744.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length277
Homology
BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: D8LLX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX7_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 2.670e-78
Identity = 128/195 (65.64%), Postives = 150/195 (76.92%), Query Frame = 0
Query:   69 DARSASPQLPLSAPSSADDDRPWTWSTPSPVRRGRGSTTELAKKPRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYWEMARPEEDSALAKKRERGEEGHVEDEIDWEEDFGEEHERTAG 263
            D+ S +P+ P SA ++A D R WTWSTPSP R GRG   E+A  PRVNLTV+EVV AVEAQG TDVR +DLRGKG GMGD  +FCT  TPL MRRLA+M+V ALK+RKLV A GITGAEG +CDDWMLVDCDNL+VHFM  E R+ELDLE +WE       +AL  KR++GEEGHVED +DWEEDFG+E  + AG
Sbjct:   46 DSSSDTPRPPSSA-AAATDGRTWTWSTPSPNRPGRGGA-EIAVIPRVNLTVDEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFCTAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVAS--GTALGSKRKKGEEGHVEDPVDWEEDFGQEAAKAAG 236          
BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: A0A836CM28_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM28_9STRA)

HSP 1 Score: 145 bits (365), Expect = 4.150e-38
Identity = 75/138 (54.35%), Postives = 97/138 (70.29%), Query Frame = 0
Query:   89 RPWTWSTPSPVRRGRGSTTELAKKPRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYWEMARP 226
            R WTWS+ +P  R  G + ++  KP+V LTV EVV A+E  G TD+RVV L GK + + D  IFCT  +  HM+RL+D+I YALK+RKL  A GITGAEGY+CDDWM+VDC NL+VH    + R+EL+LE  WE  +P
Sbjct:   78 RSWTWSSNAP--RKAGGSADIDVKPKVPLTVGEVVTALENNGGTDIRVVHLAGK-SDLADAMIFCTGRSMRHMQRLSDVITYALKRRKLSHAPGITGAEGYDCDDWMIVDCWNLIVHVFEAKYRKELNLEARWENIKP 212          
BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: A0A7S2R5J7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5J7_9STRA)

HSP 1 Score: 113 bits (282), Expect = 3.610e-26
Identity = 61/131 (46.56%), Postives = 81/131 (61.83%), Query Frame = 0
Query:   91 WTWSTPSPVRRGRGSTTELAKKPRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYW 221
            W W  P+ V + + +  ++   PR  LTVEEV  A+E      V VVD+ GK        +FCT     HMRR+AD++V ALKKRK +KA G +GAEGY+CDDWM+VD  N++VH M  + R  LDLE +W
Sbjct:   71 WNWEPPAVVEQ-QAAGYQIPVVPRKYLTVEEVTTALEELRGMQVAVVDVTGKLEETSS-MVFCTGLGRTHMRRMADVLVSALKKRK-IKAPGASGAEGYDCDDWMIVDAGNIIVHLMNEKARRLLDLEAHW 198          
BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: A0A1W0A8T6_9STRA (AP2/ERF domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8T6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.440e-22
Identity = 52/132 (39.39%), Postives = 81/132 (61.36%), Query Frame = 0
Query:   91 WTWSTPSPVRRGRGSTTELAKKPRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYWE 222
            + WS P    R     T + + P   +T+EE++ A+E + A D+  +DL GK + + ++ +FCT  T  HMRR+ADM++ ++K R +    G    EG + DDWM+ D DN++VHFM H+ R+ L LEN+WE
Sbjct:  160 YDWSLPDAGSRHADIITPIPQTP---MTMEELLPALEREQAIDIYTIDLAGK-SNLAEYMVFCTGRTRNHMRRMADMVIMSMKARNMQDNFGYI-VEGRDSDDWMIADIDNIVVHFMTHDTRKMLQLENHWE 286          
BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: A0A2D4BP62_PYTIN (Iojap-like ribosome-associated protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BP62_PYTIN)

HSP 1 Score: 103 bits (256), Expect = 2.590e-22
Identity = 55/139 (39.57%), Postives = 84/139 (60.43%), Query Frame = 0
Query:   84 SADDDRPWTWSTPSPVRRGRGSTTELAKKPRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYWE 222
            SA  D P  W  P     G+ +   +   P+  LT++EV+AA+E + A DV  VDL GK + + D  +F T  +  HMRR+ADM++ ++K R +      +  EG +CDDWM+ DC+N++VHFM  + R  L+LE++WE
Sbjct:   95 SAAGDVPSEWEVPD---AGKRNADIIPPIPQTYLTLDEVLAALEREKAIDVYTVDLAGKSS-LADFMVFTTGRSQAHMRRMADMLIQSMKARNIEDEFDYS-VEGRDCDDWMIADCNNIVVHFMREDTRRILNLEHHWE 228          
BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: W7TLC1_9STRA (Iojap-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLC1_9STRA)

HSP 1 Score: 104 bits (259), Expect = 7.850e-22
Identity = 60/139 (43.17%), Postives = 82/139 (58.99%), Query Frame = 0
Query:   91 WTWSTPSPVRR--GRGSTTELAKK----PRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKL--VKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYW 221
            WTW+ PS + +   +G  T  A      PR  L   EVV A+ A G  DV  VD+RGKG    +  IF +  +  H+RR+AD +V ALK R +  ++A G+TGAEGY+C+DWM+VD  N++VH M    R  L LE +W
Sbjct:  230 WTWARPSRLAQEEAQGRKTSRAGAIPVLPRTLLRPAEVVEALVALGGEDVASVDIRGKGNFNAEAMIFASGRSGGHLRRMADTVVGALKARGIEEMEAPGVTGAEGYDCEDWMIVDGGNVIVHLMEPSQRAALGLEGFW 368          
BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: A0A3F2RH48_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RH48_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 8.900e-21
Identity = 47/110 (42.73%), Postives = 73/110 (66.36%), Query Frame = 0
Query:  113 PRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYWE 222
            P+  LT++EV  A+E + A DV  VDL GK + + D+ +F T  +  HMRR+AD+++ ++K R++V      G EG +CDDWM+ DC+N++VH M  + R  L LE++WE
Sbjct:   73 PQTYLTIDEVQEALEREKAIDVYTVDLAGKSS-LADYMVFATGKSQAHMRRMADLLIKSMKAREIVDEFDY-GVEGRDCDDWMIADCNNIVVHLMHADTRRILALEDHWE 180          
BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: A0A5D6Y9S2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y9S2_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.150e-20
Identity = 51/110 (46.36%), Postives = 74/110 (67.27%), Query Frame = 0
Query:  113 PRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYWE 222
            P+  LT++EV+AA+E + A DV  VDL GK + + D+ IF T  +  HMRR+ADM++ +++ RKLV        EG +CDDWM+ DC+N++VHFM  + R  L LE +WE
Sbjct:  236 PQTYLTLDEVLAALENEKAIDVYTVDLAGKSS-LADYMIFTTGRSQAHMRRMADMMIGSMRARKLVDEFEYA-VEGRDCDDWMIADCNNIVVHFMNADTRRILALEEHWE 343          
BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: A0A0P1A703_PLAHL (Iojap-like ribosome-associated protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A703_PLAHL)

HSP 1 Score: 98.6 bits (244), Expect = 2.000e-20
Identity = 48/110 (43.64%), Postives = 75/110 (68.18%), Query Frame = 0
Query:  113 PRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYWE 222
            P+  L+++EV  A+E + A DV  VDL GK +G+ ++ +F T  +  HMRR+AD+++ +LK R++V      G EG +CDDWM+ DC+N++VHFM  + R  L LE++WE
Sbjct:  154 PQTYLSLDEVQKALEREKAIDVYTVDLSGK-SGLANYMVFVTGRSQAHMRRMADLLIKSLKAREIVDDFDY-GVEGRDCDDWMIADCNNIVVHFMRADTRRILALEDHWE 261          
BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: K3X3T5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3T5_GLOUD)

HSP 1 Score: 97.4 bits (241), Expect = 2.060e-20
Identity = 51/132 (38.64%), Postives = 79/132 (59.85%), Query Frame = 0
Query:   99 VRRGRGSTTELAKK--------PRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYWE 222
            V  G     E+ K+        P+   T++EV+AA+E + A +V  VDL GK + + D+ IF T  +  HMRR+ADM++ +L+ R +         EG +CDDWM+ DC+N++VHFM  + R  L+LE++WE
Sbjct:   78 VTEGEWEVPEVGKRHADMIPVIPQTYFTLDEVLAALEKEKAINVYTVDLAGKSS-LADYMIFTTGRSQAHMRRMADMMINSLRARNIEDDFNYV-VEGRDCDDWMIADCNNIVVHFMREDTRRILNLEDHWE 207          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLX7_ECTSI2.670e-7865.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CM28_9STRA4.150e-3854.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2R5J7_9STRA3.610e-2646.56Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1W0A8T6_9STRA1.440e-2239.39AP2/ERF domain-containing protein n=1 Tax=Thrausto... [more]
A0A2D4BP62_PYTIN2.590e-2239.57Iojap-like ribosome-associated protein n=1 Tax=Pyt... [more]
W7TLC1_9STRA7.850e-2243.17Iojap-like protein n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A3F2RH48_9STRA8.900e-2142.73Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A5D6Y9S2_9STRA1.150e-2046.36Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0P1A703_PLAHL2.000e-2043.64Iojap-like ribosome-associated protein n=1 Tax=Pla... [more]
K3X3T5_GLOUD2.060e-2038.64Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02410RsfScoord: 120..221
e-value: 2.2E-21
score: 76.1
NoneNo IPR availableGENE3D3.30.460.10coord: 115..236
e-value: 3.5E-23
score: 83.5
NoneNo IPR availablePANTHERPTHR21043:SF0MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1coord: 95..240
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..276
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.477
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 119..226
IPR004394Protein Iojap/ribosomal silencing factor RsfSTIGRFAMTIGR00090TIGR00090coord: 119..221
e-value: 1.8E-17
score: 61.3
IPR004394Protein Iojap/ribosomal silencing factor RsfSPANTHERPTHR21043IOJAP SUPERFAMILY ORTHOLOGcoord: 95..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3250contigH-paniculata_contig3250:5694..13972 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3250.8744.1mRNA_H-paniculata_contig3250.8744.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3250 5453..14688 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3250.8744.1 ID=prot_H-paniculata_contig3250.8744.1|Name=mRNA_H-paniculata_contig3250.8744.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=277bp
MMLLLTSSATVTARAAFAMTTRTTRPAAATAVAGFGRRRLRMREGAGGRE
LALQPFRKLNGLVPASDGDARSASPQLPLSAPSSADDDRPWTWSTPSPVR
RGRGSTTELAKKPRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHF
IFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCD
NLMVHFMLHECREELDLENYWEMARPEEDSALAKKRERGEEGHVEDEIDW
EEDFGEEHERTAGLAGSKDEGPWVQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004394Iojap/RsfS/C7orf30