mRNA_H-paniculata_contig3250.8744.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3250.8744.1
Unique NamemRNA_H-paniculata_contig3250.8744.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: D8LLX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX7_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 3.960e-74
Identity = 128/195 (65.64%), Postives = 150/195 (76.92%), Query Frame = 2 
Query:  446 DARSASPQLPLSAPSSADDDRPWTWSTPSPVRRGRGSTTELAKKPRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYWEMARPEEDSALAKKRERGEEGHVEDEIDWEEDFGEEHERTAG 1030
            D+ S +P+ P SA ++A D R WTWSTPSP R GRG   E+A  PRVNLTV+EVV AVEAQG TDVR +DLRGKG GMGD  +FCT  TPL MRRLA+M+V ALK+RKLV A GITGAEG +CDDWMLVDCDNL+VHFM  E R+ELDLE +WE       +AL  KR++GEEGHVED +DWEEDFG+E  + AG
Sbjct:   46 DSSSDTPRPPSSA-AAATDGRTWTWSTPSPNRPGRGGA-EIAVIPRVNLTVDEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFCTAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVAS--GTALGSKRKKGEEGHVEDPVDWEEDFGQEAAKAAG 236
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BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: A0A836CM28_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM28_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.840e-35
Identity = 75/138 (54.35%), Postives = 97/138 (70.29%), Query Frame = 2 
Query:  506 RPWTWSTPSPVRRGRGSTTELAKKPRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYWEMARP 919
            R WTWS+ +P  R  G + ++  KP+V LTV EVV A+E  G TD+RVV L GK + + D  IFCT  +  HM+RL+D+I YALK+RKL  A GITGAEGY+CDDWM+VDC NL+VH    + R+EL+LE  WE  +P
Sbjct:   78 RSWTWSSNAP--RKAGGSADIDVKPKVPLTVGEVVTALENNGGTDIRVVHLAGK-SDLADAMIFCTGRSMRHMQRLSDVITYALKRRKLSHAPGITGAEGYDCDDWMIVDCWNLIVHVFEAKYRKELNLEARWENIKP 212
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BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: A0A7S2R5J7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5J7_9STRA)

HSP 1 Score: 113 bits (282), Expect = 2.520e-24
Identity = 61/131 (46.56%), Postives = 81/131 (61.83%), Query Frame = 2 
Query:  512 WTWSTPSPVRRGRGSTTELAKKPRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYW 904
            W W  P+ V + + +  ++   PR  LTVEEV  A+E      V VVD+ GK        +FCT     HMRR+AD++V ALKKRK +KA G +GAEGY+CDDWM+VD  N++VH M  + R  LDLE +W
Sbjct:   71 WNWEPPAVVEQ-QAAGYQIPVVPRKYLTVEEVTTALEELRGMQVAVVDVTGKLEETSS-MVFCTGLGRTHMRRMADVLVSALKKRK-IKAPGASGAEGYDCDDWMIVDAGNIIVHLMNEKARRLLDLEAHW 198
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BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: A0A1W0A8T6_9STRA (AP2/ERF domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8T6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 6.030e-21
Identity = 52/132 (39.39%), Postives = 81/132 (61.36%), Query Frame = 2 
Query:  512 WTWSTPSPVRRGRGSTTELAKKPRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYWE 907
            + WS P    R     T + + P   +T+EE++ A+E + A D+  +DL GK + + ++ +FCT  T  HMRR+ADM++ ++K R +    G    EG + DDWM+ D DN++VHFM H+ R+ L LEN+WE
Sbjct:  160 YDWSLPDAGSRHADIITPIPQTP---MTMEELLPALEREQAIDIYTIDLAGK-SNLAEYMVFCTGRTRNHMRRMADMVIMSMKARNMQDNFGYI-VEGRDSDDWMIADIDNIVVHFMTHDTRKMLQLENHWE 286
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BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: A0A2D4BP62_PYTIN (Iojap-like ribosome-associated protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BP62_PYTIN)

HSP 1 Score: 103 bits (256), Expect = 9.520e-21
Identity = 55/139 (39.57%), Postives = 84/139 (60.43%), Query Frame = 2 
Query:  491 SADDDRPWTWSTPSPVRRGRGSTTELAKKPRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYWE 907
            SA  D P  W  P     G+ +   +   P+  LT++EV+AA+E + A DV  VDL GK + + D  +F T  +  HMRR+ADM++ ++K R +      +  EG +CDDWM+ DC+N++VHFM  + R  L+LE++WE
Sbjct:   95 SAAGDVPSEWEVPD---AGKRNADIIPPIPQTYLTLDEVLAALEREKAIDVYTVDLAGKSS-LADFMVFTTGRSQAHMRRMADMLIQSMKARNIEDEFDYS-VEGRDCDDWMIADCNNIVVHFMREDTRRILNLEHHWE 228
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BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: W7TLC1_9STRA (Iojap-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLC1_9STRA)

HSP 1 Score: 104 bits (259), Expect = 3.660e-20
Identity = 60/139 (43.17%), Postives = 82/139 (58.99%), Query Frame = 2 
Query:  512 WTWSTPSPVRR--GRGSTTELAKK----PRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKL--VKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYW 904
            WTW+ PS + +   +G  T  A      PR  L   EVV A+ A G  DV  VD+RGKG    +  IF +  +  H+RR+AD +V ALK R +  ++A G+TGAEGY+C+DWM+VD  N++VH M    R  L LE +W
Sbjct:  230 WTWARPSRLAQEEAQGRKTSRAGAIPVLPRTLLRPAEVVEALVALGGEDVASVDIRGKGNFNAEAMIFASGRSGGHLRRMADTVVGALKARGIEEMEAPGVTGAEGYDCEDWMIVDGGNVIVHLMEPSQRAALGLEGFW 368
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BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: A0A3F2RH48_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RH48_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.200e-19
Identity = 47/110 (42.73%), Postives = 73/110 (66.36%), Query Frame = 2 
Query:  578 PRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYWE 907
            P+  LT++EV  A+E + A DV  VDL GK + + D+ +F T  +  HMRR+AD+++ ++K R++V      G EG +CDDWM+ DC+N++VH M  + R  L LE++WE
Sbjct:   73 PQTYLTIDEVQEALEREKAIDVYTVDLAGKSS-LADYMVFATGKSQAHMRRMADLLIKSMKAREIVDEFDY-GVEGRDCDDWMIADCNNIVVHLMHADTRRILALEDHWE 180
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BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: A0A5D6Y9S2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y9S2_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.970e-19
Identity = 51/110 (46.36%), Postives = 74/110 (67.27%), Query Frame = 2 
Query:  578 PRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYWE 907
            P+  LT++EV+AA+E + A DV  VDL GK + + D+ IF T  +  HMRR+ADM++ +++ RKLV        EG +CDDWM+ DC+N++VHFM  + R  L LE +WE
Sbjct:  236 PQTYLTLDEVLAALENEKAIDVYTVDLAGKSS-LADYMIFTTGRSQAHMRRMADMMIGSMRARKLVDEFEYA-VEGRDCDDWMIADCNNIVVHFMNADTRRILALEEHWE 343
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BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: K3X3T5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3T5_GLOUD)

HSP 1 Score: 97.4 bits (241), Expect = 5.070e-19
Identity = 51/132 (38.64%), Postives = 79/132 (59.85%), Query Frame = 2 
Query:  536 VRRGRGSTTELAKK--------PRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYWE 907
            V  G     E+ K+        P+   T++EV+AA+E + A +V  VDL GK + + D+ IF T  +  HMRR+ADM++ +L+ R +         EG +CDDWM+ DC+N++VHFM  + R  L+LE++WE
Sbjct:   78 VTEGEWEVPEVGKRHADMIPVIPQTYFTLDEVLAALEKEKAINVYTVDLAGKSS-LADYMIFTTGRSQAHMRRMADMMINSLRARNIEDDFNYV-VEGRDCDDWMIADCNNIVVHFMREDTRRILNLEDHWE 207
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BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Match: A0A0P1A703_PLAHL (Iojap-like ribosome-associated protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A703_PLAHL)

HSP 1 Score: 98.6 bits (244), Expect = 5.570e-19
Identity = 48/110 (43.64%), Postives = 75/110 (68.18%), Query Frame = 2 
Query:  578 PRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHFIFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCDNLMVHFMLHECREELDLENYWE 907
            P+  L+++EV  A+E + A DV  VDL GK +G+ ++ +F T  +  HMRR+AD+++ +LK R++V      G EG +CDDWM+ DC+N++VHFM  + R  L LE++WE
Sbjct:  154 PQTYLSLDEVQKALEREKAIDVYTVDLSGK-SGLANYMVFVTGRSQAHMRRMADLLIKSLKAREIVDDFDY-GVEGRDCDDWMIADCNNIVVHFMRADTRRILALEDHWE 261
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3250.8744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLX7_ECTSI3.960e-7465.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CM28_9STRA1.840e-3554.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2R5J7_9STRA2.520e-2446.56Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1W0A8T6_9STRA6.030e-2139.39AP2/ERF domain-containing protein n=1 Tax=Thrausto... [more]
A0A2D4BP62_PYTIN9.520e-2139.57Iojap-like ribosome-associated protein n=1 Tax=Pyt... [more]
W7TLC1_9STRA3.660e-2043.17Iojap-like protein n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A3F2RH48_9STRA2.200e-1942.73Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A5D6Y9S2_9STRA3.970e-1946.36Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3X3T5_GLOUD5.070e-1938.64Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P1A703_PLAHL5.570e-1943.64Iojap-like ribosome-associated protein n=1 Tax=Pla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3250contigH-paniculata_contig3250:5453..14688 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score250.8
Seed ortholog evalue7.7e-64
Seed eggNOG ortholog2880.D8LLX7
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Ribosomal silencing factor during starvation
EggNOG OGs2E900@1,2SFE9@2759
Ec32 ortholog descriptionProtein Iojap/ribosomal silencing factor RsfS
Ec32 orthologEc-14_002040.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1770
Cds size831
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3250.8744.1prot_H-paniculata_contig3250.8744.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3250 5694..13972 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930004.3555434-UTR-H-paniculata_contig3250:5452..56931622930004.3555434-UTR-H-paniculata_contig3250:5452..5693Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3250 5453..5693 +
1691481106.6324277-UTR-H-paniculata_contig3250:5452..56931691481106.6324277-UTR-H-paniculata_contig3250:5452..5693Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3250 5453..5693 +
1622930004.412999-UTR-H-paniculata_contig3250:13972..143651622930004.412999-UTR-H-paniculata_contig3250:13972..14365Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3250 13973..14365 +
1691481106.6906407-UTR-H-paniculata_contig3250:13972..143651691481106.6906407-UTR-H-paniculata_contig3250:13972..14365Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3250 13973..14365 +
1622930004.4276834-UTR-H-paniculata_contig3250:14383..146881622930004.4276834-UTR-H-paniculata_contig3250:14383..14688Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3250 14384..14688 +
1691481106.7049837-UTR-H-paniculata_contig3250:14383..146881691481106.7049837-UTR-H-paniculata_contig3250:14383..14688Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3250 14384..14688 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930004.3695805-CDS-H-paniculata_contig3250:5693..60341622930004.3695805-CDS-H-paniculata_contig3250:5693..6034Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3250 5694..6034 +
1691481106.6507435-CDS-H-paniculata_contig3250:5693..60341691481106.6507435-CDS-H-paniculata_contig3250:5693..6034Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3250 5694..6034 +
1622930004.3840191-CDS-H-paniculata_contig3250:12681..128531622930004.3840191-CDS-H-paniculata_contig3250:12681..12853Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3250 12682..12853 +
1691481106.6678019-CDS-H-paniculata_contig3250:12681..128531691481106.6678019-CDS-H-paniculata_contig3250:12681..12853Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3250 12682..12853 +
1622930004.3979285-CDS-H-paniculata_contig3250:13654..139721622930004.3979285-CDS-H-paniculata_contig3250:13654..13972Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3250 13655..13972 +
1691481106.6800163-CDS-H-paniculata_contig3250:13654..139721691481106.6800163-CDS-H-paniculata_contig3250:13654..13972Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3250 13655..13972 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3250.8744.1

>prot_H-paniculata_contig3250.8744.1 ID=prot_H-paniculata_contig3250.8744.1|Name=mRNA_H-paniculata_contig3250.8744.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=277bp
MMLLLTSSATVTARAAFAMTTRTTRPAAATAVAGFGRRRLRMREGAGGRE
LALQPFRKLNGLVPASDGDARSASPQLPLSAPSSADDDRPWTWSTPSPVR
RGRGSTTELAKKPRVNLTVEEVVAAVEAQGATDVRVVDLRGKGTGMGDHF
IFCTCTTPLHMRRLADMIVYALKKRKLVKAAGITGAEGYECDDWMLVDCD
NLMVHFMLHECREELDLENYWEMARPEEDSALAKKRERGEEGHVEDEIDW
EEDFGEEHERTAGLAGSKDEGPWVQA*
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mRNA from alignment at H-paniculata_contig3250:5453..14688+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3250.8744.1 ID=mRNA_H-paniculata_contig3250.8744.1|Name=mRNA_H-paniculata_contig3250.8744.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9236bp|location=Sequence derived from alignment at H-paniculata_contig3250:5453..14688+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGTCCGAAGCATGATCCGAGGCAAAATATCCTTCACTCCGAAATTCGCA
TATTTTATCGTCATGCAGCGGCCGCAGCATCTGTGCTTGGAGAGTGCACC
TGTGTTTGATGGGTGGCTCCCTACACCAAATTGTGTCCACTGTGCACACA
TTTCTCTGTTACCCAGCTGGCATTTGGTTTTCCATATCTCTCGTCTGCAG
ATACGCACAGCGGCTACGCTACCCTAGCGGAAAGATTGGACATGATGCTG
TTGCTCACCAGCTCCGCCACCGTCACGGCACGAGCTGCTTTCGCAATGAC
AACTCGCACAACTAGGCCAGCCGCAGCAACAGCTGTCGCAGGGTTCGGAA
GACGAAGACTTCGAATGAGAGAGGGAGCCGGAGGAAGAGAACTGGCTCTA
CAGCCTTTTAGAAAGCTAAACGGACTCGTTCCCGCATCGGATGGTGATGC
ACGCTCAGCTTCACCGCAGCTGCCTCTGTCGGCGCCGTCGTCTGCTGATG
ACGACCGACCATGGACTTGGTCTACACCGTCTCCCGTTCGGCGAGGAAGG
GGTTCGACTACGGAGTTGGCCAAAAAGCCAAGGTATTTCTCGCGCGTGCT
GTGAATCGTTTGGTGACATCGTAAGTTGTGGAGTTCTTGCTAAGTCCTGC
AGGTGCTGTTGACTTTGGTGACCTGTGTTTTATGTAATTAGCTGGGATGG
TAAGTGTTCTGTGACGTCATAACTGTAACGACTTGCCGCACGTGTTATCC
ATTTCAGAGGTCTCAATGGTTCAAGCAGTATTATACCTAGGAGATGTCTG
CAGTTATGACCTTTTGCCTAAGGGATTGAGCCCTCCCTGTGAAGTCAGGC
CGCAGTAGACCACAGCTAAGCTATTGTGCCACAATAGCACAGCTCGTTCT
GTAGGAGCCGCCAGCTGTCGTTAACTGCACCTGCTACTGCTCTGATTCCC
GTAGTGTGTTTCTGTTTTCATCCACTCTTAAGACCATCTACTATAGGGTC
GAAAATAATCTCCAGTCGAACACATAATTAGTCATTTTCGATCTGCACAA
ATCTGATAAAGAAAAAGTGATTCTTCATCTAGACCACTTCTTATGGGACA
TGGAAATTTTTGAAGAAGTGGATAATTTAAATTCTAAGTGAAAGATCCCT
TTGACCACTTCGTATGGGGGGGGGGAATTTACAATTAGTCAAATGGAACT
TTCGGAACTTGGATAGCTTTAATCATGAAGAGCATGACGAAAGGCAGGAA
GCGGCATCGTCAGAAAACACGGCAGTACGAACTGGGCCGGATATGAAACC
AATATTCTTTCCACGGCGCATATCTCAAGAACCACCGCGAGATATTACGA
ACTGAACACATCTCTGTAATCAGCCAATCACCATGCATGTGCAGGGACAG
CTTGGAATGTGATTGGGTGAAGTCAGACAAAACAAAAGCTCACGTGTCAA
CAATATACTGGAGTTAGAGTGGGGTGAAACCTCCAAAAAAATGCGGCGGA
ATTAGATTTTTTCATGTTGTTCACCTTGGTGCAATGCTGCAGCACTCTCC
TTGCTGCAGACGTTGGGGGCCTTGCCCAACGCACAAGCTGCGACATGGCT
TCAAGCTCGCGTGGTACCGTGTGTTGGCAGAAGATCTCTGTCCCAAGGAT
CTATTTCGATCGGCAGTACGTCTTACATCTTCATTCGTTCGTTTGCACGT
ACGTGCACTTCGGTAGCCTGCTTCCTTCTGGGGGAAGAACAGCCAAACAT
TTATGCCAATCGGTACGTCCGACAGGGGTCCCACAACAATCTGCGATGCC
CCCCTCAGTTTTGCGAATTTTGACCTAAAAATATAATTCCATATCCGGAA
CATACGTAAAATATTATTGAGTAAAGTTCACACACACATATACATATATA
TATATATCAAAGCAGTTACGGTCGACTCTGCATTTTCTCGAATCTTCGGA
TAGGCCACAACTCTCGATAAGAAAAAAAACAAACATGAAGGCAATTGAAT
GTGTCGGCAAGTTAGTGAAGAACACGATGTCAAAATTCCATCGCAAAATT
CGTTAAATTGATGGAGGCACAGCCTCCACACCGTCCCGTTAGTTTCTTGA
CTGGCCCAGCCCGTATCTGTCTGATTTTCCAAGAGTACAGAGAGTGAGGT
ACAACAGGCCACCCCTGCCACACCTCACACCCAAGCTACCCTTGTCGTAG
TACACACATACCCTACTGTGATGGTGCCACTTACTGAGGATGAAGATGTG
TTCGATTGGTCCGACGACGAGGATGAGATGTTGCTTGCTGTTTGTCAAGC
AACCACAAACATCACCCCCTGTTACGACACCCTCTGGAGATGTTGACATT
GTGCCTACCGCTGACCTCTATCTCGTTTGCTGACTTCAGCTGGCGTTTTC
CCCACGCTTTTCAAAACTGAGGATATTACTTCACTCTGTTCTCCTCGCAG
CAGCTACAGCCTGTCCAAGTTTGGAACACCTTACTAAATCACAGTTTCCC
ATAAGAAGTGGTTCTTCGATTTTTGAATTGGATATTTTTCACTTGGATAA
TTGAAAATATATTTTTCTAAATCAATTATCCAAGTCCCATACAAAGTGGC
CTTCTAGAGTCGAAACATTAAAAAGGTGGTTTGTTGGAGGTGTGATGGAG
TTTTGTAAGCGGCGCAATTAGCGAGAGAATTTCAAACACACCAGGCCTTG
TCCAGCACACAGCACGCCCTCATTCTGTGAAAGCGGACCACCATAAGTGC
ACCATCCATCGCAATGCAAATCAAGACGAACTCATGCGTGGAATCGGTGT
GGAAGGAACTGAGGGCTCAAGAGTTCAGTTCGGGTGTATGCAAGGCACAG
TGGATGATTTTACAGAAAGCGCCGCTGGACCCAGCATATGAATGCGCCTG
TCCTCTTCGTCCATGTACTCGACAGCCGCCACTACAGCACCAAGCGCCAA
TGTAATAAATGTCTGCAATTCCTCCAGATTTGCCATAGAGCGGTCGGGCT
CACACGTTGGATTATGTATGTATGTGCTCGTGGCATCAGCGACCAGCGTG
GGTGTCCCACCGTGTCCTATGAAATATCTCAAACATGGGCAGTCGAAAGT
ATAACATAGGATGCCTTTTTTATTCTTTGATCGACAGGATGTCCCAGCCC
GTCTCCACTGCAAAAAACAAATTGTGAACAAACACTCCGTATGCTGTGCT
ACAGTAATTAATGTGCGACAAATACCTGCAATCAAATTTTGACGAACAAA
TGCTGCTTAACCTTAAACGCAGAACGCAAAAATTAAACACACCGATCTAT
CCTCGCAATGCAACCGCCTCCCGAACTGCGCGCCCGAACGACGAACATAA
CAAAAAATCAAACGTCTGTCCAACCAATTGGCCATACGTTTTTATGTTAG
TTTGACGATGCTCTCCCTTCAACGCTCGATCTCAGCGTCACAGTCCTCGT
GTTCCTCCCCCCCCCCGTATCATCGAAATCGGCATTGTCGTCCACTTGCA
TCTCCGCCCCCAACCCATCCTCCGGAAGAACTCCGACTCTCCCAGGAACG
CTGTCCTCGTCGTAACAATCGGGAACGATGAGCGGACGGATCTTACCTCC
GAGAGTGTCATCGTCTTCTATCCCCCGACGCATCTCTTCGATGGCAAGTT
TGACCAATTAGCGCAGTTAGCCGGCTGCCGTCTCCGCTCTTGTCCCTTCC
ACTCCTTGTCCCCATACCAACCCAAGCGAATCTGCTCCCACACCTGCTGC
ATGTGCCGCTGCTTTGTGTCGTACCGGAAGCTGACATCCTGCTTGCCGTG
CTGCCAGAACAGCTCGATTGGTTGGAAATTAGGCATATACGGCGGTGTCT
ACGTCAGCTGCCAATCGTGCTTGTTCATGAACCCAGTGTTTCTCAAGTTC
TTCACGTCGTCAAGCCAAACCAAGCATACCGTATGTAATTGTCTGAGAGC
TACCGTGCGTGATATTAGAATTGTATCGGGGGGAGTGTGGCTGTCGTAGT
GAGCACTTGAGCCATTAGACGTAGGGCTTATGTTTTTGCCGTTGACCTTG
TCGTTGCTCCACCCATTTTGTATTTCCGATGTTTTGATGTGCCGCGTTGG
ACCCAAACCATGTAATCAAAAGCGAAATCGAATTTATGTTTCATAAAGAC
ACGCCCCTGGGCCGTATCCTCTCGAGGAACGGAAAAACGGATATATATGT
TTTGTTTTTTTTCATCGGAATGTGATTTTCTCTTCCGAATATGTGTACGG
ATGTCGATGTCTTGTGCTGAATTTTGACGGTTACAAATGGTTGAGTGACC
AGGTCGAAAAATGGAAAGGACTTGAGAAACACCACAACCGTAGGTAAACC
TTGCTCAGCTAGACACGCCAGCCTTAGGTGCGAATCCGTTCTGTATTGAG
AAAGCTACCGCGTTTCAAACCCAGTTGCTATTACAAATAGTGCCGTTTTT
TCACCTGTTTGTCCGTGTCTGGCTTGCCCCTGGGCGCGCTAGGGTGATTC
TACCCGAAACAAGTGCATGATGCTCAGTTGATGAAGGGCTACGACCCGAG
CGACATTTTGTTGAATGCTGCATTCCCTTCTCACCTGCTTGCAATTCACC
AGCTTTGGTTGACACCGTGGAACCCTTGATCGTCCTTGATCGTTATTATT
TTTTTCAGCTGTTCCAGTCACGAGTGTTTTCGTCTTCCTTTTGATATCCT
CAAACGAAATTTCATTTTGTAAGGAGTCTTGAGGACGCGTGAAGAAACGC
GGTGGAATAGTGTTGTGCGAGAAAACGAAAAATATCCACGGCGGGTTAAA
GGTTCATTCGAACAATCACAGAGAAAGGACGTCTCTCCGCTCCTCGAGAA
GGCATGGCCTTGGGAGCAGTAGAATGACCGCAGCGTTTGGAGCGAAATCT
ATTGGGGGGGGGGGGGAGGGTCAGACTGACGTCATGCCAATACCCCACTT
TAGAATCAAATTATTTCATGCCGATTATATATTTTTCGTAATCCGTTTAA
TTTTTTTACGGGCAATAATTTATTTTTGGATACCAAAATCAGTAAATTCG
TTTAATCATGAGCTACAAAAATGTGAAGCCAGCTGTTTTGAGGGCCTTGG
AGAAAATTCAAGAAAACTATATTTTACAGTGCTTTGTGAGGGTAATCTGG
TTTCAACTCGGAATAATCTTGTGGGATGCAACATTGTTCTTGAGGTTTTG
GCGCTCACCACGCACGAAGCAACGCTGGAAACACCTCCAGTAGTTCATAA
GTTAGACCGATTGCAAGACGGGAAACCAGGGCCACAGACAAAGGCTAACG
GAAGGCGGTCGACCTGCAAAGCTTTCGCGAAAGAGAATACTTGAAAAAAT
AATTCCTGTACTGTAGTTTAATAATTAACAGTCATGTTTTTGCTGTTAGT
GTTTTTTGGTCTTCGCAGTTGTGCGCTGTGCATAAGTATTTCAAGCGAAG
TACGGCATGCGGTGAGAGTCAATGCGACTAATCAAGCGCGCCCAACAAAC
TACGAGATAATCCTACAGAGCGCGAGGGAACCTTGATGTGCAGGCGTTGG
TCTTGTGTCGCACGTGAAGGACCCACCGGCGGAACAGGCTGCACCAAGCT
GACCTCCACAGACATTAGGACTGTCGTGTGTGCGTTGGTCAAACAAAGAA
GGGTCTCTCACTGTAGGGGTACAGACAGTAATTTTATGGTGAAAATTTGC
AGGGGTGTAGATGGTAATTTTATTATACTTGCTCCGTTCAGTAACTAGAG
GAACTTAGGTGTGACGCCCCGTCTACGGCAACTAATTTGGAGCTCGTGGT
ATCGATTGAATGACAATTCTACCTAGATTTGACTCAATGCGATCAAAAAG
AATAATAAGAAAAAAATCGTAATAGAAGATGAGTCGAAATTATCCATATT
TTAGTCACTTTTTACAGACCCGGCCAATTTTTTGAGACGGAACACAATGG
AGCCCACCCCGGCGACCCCACCACGCCGCAGAGGCAAGGAGTTGCCTCTC
GGCAGGAGGCATGCGCTTGCAATCGACATGGCGATGTCAATCCAGCTGGG
TTTTTCGAATGACCGGATGGCGAAACGTCACGACTCGGTGAATTTGGGTT
TTTTTGCTTTTTCTTTAGCCGCTCGCGCACGCCGTGGGCTTCACGGATTG
CCGTGAAAAATTGGGGACCAACCCAAAAACGTAGAGGATTCTAAAAAAAA
AAAGTTGGACATCGTTAATGTCTCACACAAATCGAAGGTTCTTTTCTTAC
TGAACGGAGGAGGTCAGGTTTAGTGTGATCCACTGTCAGCACGAAAACTT
CGAAGAGCATTTTTGACATGGTTTATTTTTTCCCTTCGCCGTCAAATTGT
GATTGTCGGCGCTCGCGCGTTGAAAGAGCTTAGGGGTCTGGAACGTGGGC
ACCCCTCAGTCAAGTGCATCGTCTAGAAAGATGAGGAGCCGTTTTTACAA
CTTGAATCGCGTCTATAAAGTTGAAGTATATCATGACCACGGCGATCTAC
GCCATTCCGATACTCTCGGTCACGAATCCAACTCGCTTTGAAGGCTCGGA
AGCCCTTACAGAGTGTCCATCATGTGATGAAAAATAACCAAGTTCGTTAC
TAATAATGCAGGGGTTGATGACCACTGGGTATTTATGTTCAGGGGTTCCT
CATAATCTCGTCGCTAGCGTTTGAAATCAAATTTGCTTGTTGGCGCTCTG
ATTAGCCGATTGAGCTGGCACCACCAACTTGTTTTTTTTCCCGAACAGAT
CTCCGATCGATATCCGGTCGCCCCACTTTCCTTTACTGTTTTTACGTGCT
GATTGCCGTTCGTGGTGAGTCTACCGGAATCTGTGCGTTGAACCAGATCG
TACGACGTACCAACGGTTTGCGCGAGTGTAGCCAGGATTTCAGTTATTTT
TTTCGAAATTGGCAAGTTGAGCTGGAGACATTCCCCAACTTTTCCCTAAC
AAACGTGCTGGGATGGATGTTTCACAGGGTTCGCGGTCACCTTGGGCAAG
AAACACGGGCTGGAGGAAAACAAAAGAAACCGTATTATTGCCCCCTCCCG
AGACCGCCGCAGCACCCACCACCAGACAAATCTGTTCGATGCGTCAACCC
TTCTCACGTTGAACACACACATGTGAAACTCAAAACTGCGAGATAATAAT
GGCCCATGCTGGATACCTGTCATACCAGTACGTGAATGTAAGCTGGCGTG
GTGCTGTTCACCGTGATTGTCTACCGCAGGGTAAATTTGACGGTGGAAGA
GGTTGTCGCTGCGGTGGAGGCTCAGGGAGCTACTGATGTTCGAGTGGTGG
ACCTGAGGGGGAAAGGAACAGGAATGGGCGACCACTTTATTTTCTGCACG
TGCACGACTCCCCTGCACATGCGCAGACTTGCGGACATGATCGTTTACGC
GGTGAGGAGAGAGAGAGACGGCGATGCTACGGTGCGGCGGTTGCAACGGT
TGTTAGATACTCGGACCTTCCGTCATGTAGTTTTGTGACAGTGGTGATGT
TATTGACCCTCTGACGACGACCAGGCAGGCGAGACGAGGCTTACGTTCTG
TCTTGTCTCTTACAGTCGCAACCGTCATGCACAAGAGGGAAGGACAGTAT
TGTAAAATTGACCCACTCATAATTCATCTTGTGGAAACTTGTCTTCGCGG
TAAAGCAGGTCTCGCAATGAGGGTAGCGTTGAAGCACGCAACAGCCGTTC
TTCCCGCGGGTATACATTGCATACCGTTTTGAAGTACATGGCAAGTAGAA
GACATTGAACCCTCACAGGCCTGCCTGCCTACCCCATTTCGAAGCTGCGA
TGAGTGTAGCGATACGCAGTCAGCGGCAAAATGCCTCAGCGCGGAACCAT
GACGCCCTCTCCGCGTCGTGCTGTGGTGCGTGTACATGTAGCATGTTTGA
GAGTACATGGGCTTGAATACCGCGCCAGAACCTCACTCCGCCGACCAACG
CGCCACGTCTGTAGACCGCAGTATTTATGGGAAAAGGCAAACTAGCATAT
ATATTTACTCGGTGCTGACGAAAAATCAAAAGTGCACCTTGTTGTGGTAT
ACTCGATTTTCACGATTCCACGACAATCTTGTTTTTTTTTTTTCCGGTGT
GATTTCACACCGAAGACGTGTGTTTCCTCAATTCTCGTACTTGTGGTTTG
AATTTGTTTTGCGATCACCCCTCTTTGTTTTTCATATCCTTGTGCTACGC
AGTTAAAAAAGCGCAAGCTGGTGAAAGCGGCGGGAATCACCGGCGCCGAG
GGATACGAGTGCGACGATTGGATGCTCGTCGACTGCGATAACTTGATGGT
TCACTTCATGTTGCATGAGTGCCGAGAGGAGTTAGACCTGGAGAATTATT
GGGAAATGGCGAGGCCGGAAGAGGATTCCGCACTGGCGAAAAAGCGTGAG
CGCGGTGAGGAGGGACACGTTGAGGACGAAATTGACTGGGAGGAGGACTT
TGGGGAGGAGCACGAGCGCACGGCGGGTCTTGCGGGCAGTAAGGACGAGG
GGCCGTGGGTACAGGCATGATCGGATGGTTTTCCTTCATGTCAATGGTTG
CCAGATGCCTCTTAGTGTGTGATTAGCTAGAGGTGTTGTGGTGTTGTGTT
GTGCAGGGAGCGGTGTCAACTGGCGGGGCCTTGGTTTTTGCTGCCGATGC
CTCACCTGCAGTAATATGTTTAGTATGCGGAGAAGAATAAACGAAACGGT
CGCGCTTTCGTTTGCTGTGAGTCTATATCTATCGTGTGCGACCCAAACAG
TATTGATTTTTGTGCGTTTTTGGTCATTCGAGAGACGTATAGCCTCGCTG
CTGTTTTGTTTTTATGGACACGGTTACATGTCAGTGCATTGTAGGGCCTT
ATCGTGTTGTTGCCTCGGTCATCTATGTGTGTACTGGAAGTGGTGTTTGC
CAACGCTAGACTAGCGAATACGGCGAGATAGGAAGAGCGAGCCAATTAAA
TGAATCTCTTTAAAGTGTGTGCTCCTATTCAGAGGATGCTTGATAATTAG
CAAGATCGTCGTGACGCGTGTTGCCCGGCTGTTCCGCGGCAGATGCGGTT
GCGGTTGAGAGTGTGTACTTGGATAGTAACAGTACTGTTGGGTTCGCGCT
ATTATGAGTTACTTTTCCCTCGGCACGAATGTCGACACCGGAGTTCCGGA
CGTTTCATGATTCTGATTTAGGCGAAGCGTGACTTCTGTCCGTGCTGTTG
TACGGTGTGATGCTTTCAACAAGGATTACTATTTAC
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Coding sequence (CDS) from alignment at H-paniculata_contig3250:5453..14688+

>mRNA_H-paniculata_contig3250.8744.1 ID=mRNA_H-paniculata_contig3250.8744.1|Name=mRNA_H-paniculata_contig3250.8744.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1662bp|location=Sequence derived from alignment at H-paniculata_contig3250:5453..14688+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGCTGTTGCTCACCAGCTCCGCCACCGTCACGGCACGAGCTGCTTT
CGCAATGACAACTCGCACAACTAGGCCAGCCGCAGCAACAGCTGTCGCAG
GGTTCGGAAGACGAAGACTTCGAATGAGAGAGGGAGCCGGAGGAAGAGAA
CTGGCTCTACAGCCTTTTAGAAAGCTAAACGGACTCGTTCCCGCATCGGA
TGGTGATGCACGCTCAGCTTCACCGCAGCTGCCTCTGTCGGCGCCGTCGT
CTGCTGATGACGACCGACCATGGACTTGGTCTACACCGTCTCCCGTTCGG
CGAGGAAGGGGTTCGACTACGGAGTTGGCCAAAAAGCCAAGATGATGCTG
TTGCTCACCAGCTCCGCCACCGTCACGGCACGAGCTGCTTTCGCAATGAC
AACTCGCACAACTAGGCCAGCCGCAGCAACAGCTGTCGCAGGGTTCGGAA
GACGAAGACTTCGAATGAGAGAGGGAGCCGGAGGAAGAGAACTGGCTCTA
CAGCCTTTTAGAAAGCTAAACGGACTCGTTCCCGCATCGGATGGTGATGC
ACGCTCAGCTTCACCGCAGCTGCCTCTGTCGGCGCCGTCGTCTGCTGATG
ACGACCGACCATGGACTTGGTCTACACCGTCTCCCGTTCGGCGAGGAAGG
GGTTCGACTACGGAGTTGGCCAAAAAGCCAAGGGTAAATTTGACGGTGGA
AGAGGTTGTCGCTGCGGTGGAGGCTCAGGGAGCTACTGATGTTCGAGTGG
TGGACCTGAGGGGGAAAGGAACAGGAATGGGCGACCACTTTATTTTCTGC
ACGTGCACGACTCCCCTGCACATGCGCAGACTTGCGGACATGATCGTTTA
CGCGGGTAAATTTGACGGTGGAAGAGGTTGTCGCTGCGGTGGAGGCTCAG
GGAGCTACTGATGTTCGAGTGGTGGACCTGAGGGGGAAAGGAACAGGAAT
GGGCGACCACTTTATTTTCTGCACGTGCACGACTCCCCTGCACATGCGCA
GACTTGCGGACATGATCGTTTACGCGTTAAAAAAGCGCAAGCTGGTGAAA
GCGGCGGGAATCACCGGCGCCGAGGGATACGAGTGCGACGATTGGATGCT
CGTCGACTGCGATAACTTGATGGTTCACTTCATGTTGCATGAGTGCCGAG
AGGAGTTAGACCTGGAGAATTATTGGGAAATGGCGAGGCCGGAAGAGGAT
TCCGCACTGGCGAAAAAGCGTGAGCGCGGTGAGGAGGGACACGTTGAGGA
CGAAATTGACTGGGAGGAGGACTTTGGGGAGGAGCACGAGCGCACGGCGG
GTCTTGCGGGCAGTAAGGACGAGGGGCCGTGGGTACAGGCATGATTAAAA
AAGCGCAAGCTGGTGAAAGCGGCGGGAATCACCGGCGCCGAGGGATACGA
GTGCGACGATTGGATGCTCGTCGACTGCGATAACTTGATGGTTCACTTCA
TGTTGCATGAGTGCCGAGAGGAGTTAGACCTGGAGAATTATTGGGAAATG
GCGAGGCCGGAAGAGGATTCCGCACTGGCGAAAAAGCGTGAGCGCGGTGA
GGAGGGACACGTTGAGGACGAAATTGACTGGGAGGAGGACTTTGGGGAGG
AGCACGAGCGCACGGCGGGTCTTGCGGGCAGTAAGGACGAGGGGCCGTGG
GTACAGGCATGA
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