mRNA_H-paniculata_contig32072.8635.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig32072.8635.1 vs. uniprot
Match: D8LIX9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIX9_ECTSI) HSP 1 Score: 132 bits (333), Expect = 2.160e-34 Identity = 69/83 (83.13%), Postives = 73/83 (87.95%), Query Frame = 1
Query: 7 YPKIVDDLSNWQVRSVTGSNGAIMVAAETSTISWGTSVGGELGYGEASAT-RTSTKPKLVDPLEGLTVMQVAMGYGHSLLLAR 252
YPKIV+DLSNWQ RSV GSNGA++VAAETSTISWGTSV GELGYGE T RTSTKPKLV+ LEGLTVMQVAMG GHSLLLA
Sbjct: 428 YPKIVEDLSNWQTRSVAGSNGALLVAAETSTISWGTSVAGELGYGEEIGTPRTSTKPKLVNALEGLTVMQVAMGLGHSLLLAE 510
BLAST of mRNA_H-paniculata_contig32072.8635.1 vs. uniprot
Match: A0A836CDF7_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDF7_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.230e-20 Identity = 47/81 (58.02%), Postives = 58/81 (71.60%), Query Frame = 1
Query: 7 YPKIVDDLSNWQVRSVTGSNGAIMVAAETSTISWGTSVGGELGYGEAS-ATRTSTKPKLVDPLEGLTVMQVAMGYGHSLLL 246
YPKIV+DL NW R + S+ IMV AE+S +SWG ++ GELGYGE +TS KPK++D LEGLTV VAMG HS+LL
Sbjct: 418 YPKIVEDLGNWSCRCMAASSQCIMVGAESSAVSWGQAIAGELGYGEGEDIPKTSRKPKILDALEGLTVTGVAMGLAHSVLL 498
BLAST of mRNA_H-paniculata_contig32072.8635.1 vs. uniprot
Match: A0A3S1BJQ1_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1BJQ1_ELYCH) HSP 1 Score: 89.0 bits (219), Expect = 9.300e-19 Identity = 46/84 (54.76%), Postives = 61/84 (72.62%), Query Frame = 1
Query: 7 YPKIVDDLSNWQVRSVTGSNGAIMVAAETSTISWGTS-VGGELGYGEASATRTSTKPKLVDPLEGLTVMQVAMGYGHSLLLARC 255
YPK+V DLS W++RS+ SN +I+VAA+ S +SWG S GELGYGE ++ST PK V PL+G+ V QV+ G H+LL+ARC
Sbjct: 377 YPKLVQDLSGWKIRSIGTSNKSIVVAADESVVSWGPSPCFGELGYGETGI-KSSTTPKEVKPLDGMYVHQVSCGISHTLLIARC 459
BLAST of mRNA_H-paniculata_contig32072.8635.1 vs. uniprot
Match: A0A2C9K1G5_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9K1G5_BIOGL) HSP 1 Score: 84.3 bits (207), Expect = 4.130e-17 Identity = 42/84 (50.00%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 7 YPKIVDDLSNWQVRSVTGSNGAIMVAAETSTISWGTS-VGGELGYGEASATRTSTKPKLVDPLEGLTVMQVAMGYGHSLLLARC 255
YPK+V DL W++RS+ SN +I++AA+ S +SWG S GELGYGE ++ST PK + P+EG+ V V+ G+ H+LL+ARC
Sbjct: 378 YPKLVQDLCGWKIRSIGTSNKSIVLAADESVVSWGPSPCFGELGYGETGI-KSSTVPKEMKPIEGIYVHHVSCGFSHTLLIARC 460
BLAST of mRNA_H-paniculata_contig32072.8635.1 vs. uniprot
Match: A0A6P4ZUV6_BRABE (protein RCC2 homolog n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZUV6_BRABE) HSP 1 Score: 84.0 bits (206), Expect = 5.700e-17 Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = 1
Query: 7 YPKIVDDLSNWQVRSVTGSNGAIMVAAETSTISWGTS-VGGELGYGEASATRTSTKPKLVDPLEGLTVMQVAMGYGHSLLLAR 252
YPK + DLS W VRSV SN +I+VAA+ STISWG S GELGYGE A ++ST PK V L+G+ + +V+ GYGH++ +AR
Sbjct: 384 YPKPIQDLSGWDVRSVGCSNRSIVVAADDSTISWGPSPTYGELGYGENKA-KSSTIPKEVKTLDGVYIHRVSCGYGHTIFIAR 465
BLAST of mRNA_H-paniculata_contig32072.8635.1 vs. uniprot
Match: UPI0001CBB169 (protein RCC2-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBB169) HSP 1 Score: 83.6 bits (205), Expect = 7.800e-17 Identity = 43/83 (51.81%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 7 YPKIVDDLSNWQVRSVTGSNGAIMVAAETSTISWGTS-VGGELGYGEASATRTSTKPKLVDPLEGLTVMQVAMGYGHSLLLAR 252
YPK V DL+ W++RSV SN +I++AA+ S ISWG S GELGYG+ A ++ST+PK + L+G+ + VA GYGH+L++AR
Sbjct: 380 YPKPVQDLTGWKIRSVGCSNHSIVIAADDSVISWGPSPTYGELGYGDHGA-KSSTQPKEIKLLDGINIHSVACGYGHTLMIAR 461
BLAST of mRNA_H-paniculata_contig32072.8635.1 vs. uniprot
Match: UPI000A2A8308 (protein RCC2 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8308) HSP 1 Score: 83.6 bits (205), Expect = 7.860e-17 Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 7 YPKIVDDLSNWQVRSVTGSNGAIMVAAETSTISWGTS-VGGELGYG-EASATRTSTKPKLVDPLEGLTVMQVAMGYGHSLLLAR 252
YPK V+DLS W VRSV S +I+VAA+ S +SWG S GELGYG + +++ST+P++V+PLEG+ V VA G H+L +AR
Sbjct: 384 YPKRVEDLSGWDVRSVGCSKTSIVVAADESVVSWGPSPTSGELGYGLKKGGSKSSTRPQIVEPLEGVYVYSVACGLSHTLFIAR 467
BLAST of mRNA_H-paniculata_contig32072.8635.1 vs. uniprot
Match: UPI00103F57D5 (protein RCC2 homolog n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103F57D5) HSP 1 Score: 77.8 bits (190), Expect = 8.810e-17 Identity = 41/82 (50.00%), Postives = 58/82 (70.73%), Query Frame = 1
Query: 7 YPKIVDDLSNWQVRSVTGSNGAIMVAAETSTISWGTS-VGGELGYGEASATRTSTKPKLVDPLEGLTVMQVAMGYGHSLLLA 249
YPK V DL+ W +RSV SN +I++AA+ S I+WG S GELG GE + +++ +PK V ++GL + QVAMGY H+LLL+
Sbjct: 2 YPKPVQDLTGWNIRSVGTSNTSIVIAADDSLIAWGVSPTYGELGTGEIN--KSTARPKEVSRMDGLNITQVAMGYSHTLLLS 81
BLAST of mRNA_H-paniculata_contig32072.8635.1 vs. uniprot
Match: A0A834RB09_SARSC (Protein RCC2 -like protein n=2 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A834RB09_SARSC) HSP 1 Score: 83.2 bits (204), Expect = 1.100e-16 Identity = 43/83 (51.81%), Postives = 62/83 (74.70%), Query Frame = 1
Query: 7 YPKIVDDLSNWQVRSVTGSNGAIMVAAETSTISWGTS-VGGELGYGEASATRTSTKPKLVDPLEGLTVMQVAMGYGHSLLLAR 252
YPK V DL+ W +RS+ +N +I+VAA+ S ISWG S GELGYGE + +++ST P+ V PLEG+ + +V+ GYGH+L++AR
Sbjct: 408 YPKNVQDLNGWNIRSIGCANRSIVVAADDSVISWGPSPTYGELGYGE-NKSKSSTIPQEVKPLEGIYIHKVSTGYGHTLMIAR 489
BLAST of mRNA_H-paniculata_contig32072.8635.1 vs. uniprot
Match: A0A1Y3BRX3_EURMA (RCC2-like protein (Fragment) n=1 Tax=Euroglyphus maynei TaxID=6958 RepID=A0A1Y3BRX3_EURMA) HSP 1 Score: 79.7 bits (195), Expect = 1.360e-16 Identity = 42/83 (50.60%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 7 YPKIVDDLSNWQVRSVTGSNGAIMVAAETSTISWGTS-VGGELGYGEASATRTSTKPKLVDPLEGLTVMQVAMGYGHSLLLAR 252
YPK V DL+ W +RSV +N +I++AA+ S ISWG S GEL YG+ + ++ST P+ V PLEG+ + +V+ GYGHSL +AR
Sbjct: 93 YPKNVQDLNGWNIRSVGCANRSIVLAADESVISWGPSPTYGELAYGDTKS-KSSTIPQEVKPLEGIHIYRVSNGYGHSLFMAR 174 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32072.8635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig32072.8635.1 >prot_H-paniculata_contig32072.8635.1 ID=prot_H-paniculata_contig32072.8635.1|Name=mRNA_H-paniculata_contig32072.8635.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp YRYPKIVDDLSNWQVRSVTGSNGAIMVAAETSTISWGTSVGGELGYGEASback to top mRNA from alignment at H-paniculata_contig32072:1281..2318+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig32072.8635.1 ID=mRNA_H-paniculata_contig32072.8635.1|Name=mRNA_H-paniculata_contig32072.8635.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1038bp|location=Sequence derived from alignment at H-paniculata_contig32072:1281..2318+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig32072:1281..2318+ >mRNA_H-paniculata_contig32072.8635.1 ID=mRNA_H-paniculata_contig32072.8635.1|Name=mRNA_H-paniculata_contig32072.8635.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=540bp|location=Sequence derived from alignment at H-paniculata_contig32072:1281..2318+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |